RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 SYT2Q8N9I0 419 aaPredicted RBP7.32□□□□□ -1.24
CSNK2A1-204ENST00000400227 SPATA4Q8NEY3 305 aa7.32□□□□□ -1.24
CSNK2A1-204ENST00000400227 GOLGA5Q8TBA6 731 aa7.32□□□□□ -1.24
CSNK2A1-204ENST00000400227 ZSCAN18Q8TBC5 510 aaPredicted RBP7.32□□□□□ -1.24
CSNK2A1-204ENST00000400227 FNIP1Q8TF40 1166 aa7.32□□□□□ -1.24
CSNK2A1-204ENST00000400227 NINJ1Q92982 152 aa7.32□□□□□ -1.24
CSNK2A1-204ENST00000400227 MASTLQ96GX5 879 aa7.32□□□□□ -1.24
CSNK2A1-204ENST00000400227 FAM20AQ96MK3 541 aa7.32□□□□□ -1.24
CSNK2A1-204ENST00000400227 NOX5Q96PH1 765 aa7.32□□□□□ -1.24
CSNK2A1-204ENST00000400227 GORASP1Q9BQQ3 440 aa7.32□□□□□ -1.24
CSNK2A1-204ENST00000400227 SMURF1Q9HCE7 757 aa7.32□□□□□ -1.24
CSNK2A1-204ENST00000400227 NLRC4Q9NPP4 1024 aa7.32□□□□□ -1.24
CSNK2A1-204ENST00000400227 PLCB1Q9NQ66 1216 aa7.32□□□□□ -1.24
CSNK2A1-204ENST00000400227 INTS7Q9NVH2 962 aaKnown RBP7.32□□□□□ -1.24
CSNK2A1-204ENST00000400227 PI4KBQ9UBF8 816 aa7.32□□□□□ -1.24
CSNK2A1-204ENST00000400227 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.32□□□□□ -1.24
CSNK2A1-204ENST00000400227 TNPO3Q9Y5L0 923 aaKnown RBP7.32□□□□□ -1.24
CSNK2A1-204ENST00000400227 COL2A1P02458 1487 aaPredicted RBP7.32□□□□□ -1.24
CSNK2A1-204ENST00000400227 BTNL10A8MVZ5 291 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 F5H6K3 240 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 AGPSO00116 658 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 MAN2B1O00754 1011 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 MSH4O15457 936 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 OPA1O60313 960 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 NDUFB10O96000 172 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 FOSP01100 380 aaPredicted RBP7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 CYP3A4P08684 503 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 KRT15P19012 456 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 ACTN2P35609 894 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 AFF3P51826 1226 aaKnown RBP7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 SNAP25P60880 206 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 JAG1P78504 1218 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 APBA1Q02410 837 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 ICA1Q05084 483 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 KLRC3Q07444 240 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 TCP10Q12799 353 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 ADAM9Q13443 819 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 ASIC2Q16515 512 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 SLC18A3Q16572 532 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 ZSCAN26Q16670 478 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 HSP90B2PQ58FF3 399 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 STRIP1Q5VSL9 837 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 HAUS3Q68CZ6 603 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 ZCCHC8Q6NZY4 707 aaKnown RBP7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 OVCH1Q7RTY7 1134 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 SFR1Q86XK3 245 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 CISD2Q8N5K1 135 aaKnown RBP7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 ANKRD13CQ8N6S4 541 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 LINC00482Q8N8I6 264 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 ERMNQ8TAM6 284 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 HDAC7Q8WUI4 952 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 SYT3Q9BQG1 590 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 CRACR2AQ9BSW2 395 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 LRRC1Q9BTT6 524 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 POLR3CQ9BUI4 534 aaPredicted RBP7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 SELENOOQ9BVL4 669 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 AMNQ9BXJ7 453 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 DBNDD1Q9H9R9 158 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 SMARCAL1Q9NZC9 954 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 EHD2Q9NZN4 543 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 HDAC9Q9UKV0 1011 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 NENFQ9UMX5 172 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 TRAF3IP3Q9Y228 551 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 ATRNL1Q5VV63 1379 aa7.31□□□□□ -1.24
CSNK2A1-204ENST00000400227 A0A087X0T9 212 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 FAM86B1E9PN63 330 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 TULP2O00295 520 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 BUB1O43683 1085 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 CALUO43852 315 aaPredicted RBP7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 PALMO75781 387 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 EYA4O95677 639 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 KRT18P05783 430 aaKnown RBP7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 FAM86B2P0C5J1 330 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 FAM228BP0C875 321 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 MYBP10242 640 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 ACTN1P12814 892 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 FAHP16930 419 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 HMGB2P26583 209 aaKnown RBP7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 KLRC1P26715 233 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 RAPGEF1Q13905 1077 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 ZNF460Q14592 562 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 RRP1BQ14684 758 aaKnown RBP7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 EPHA7Q15375 998 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 C21orf62-AS1Q17RA5 79 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 KNOP1Q1ED39 458 aaKnown RBP7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 ABCB5Q2M3G0 1257 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 PAN2Q504Q3 1202 aaKnown RBP7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 GLE1Q53GS7 698 aaKnown RBP7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 TMEM177Q53S58 311 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 PRR16Q569H4 304 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 TDRD12Q587J7 1177 aaKnown RBP7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 PLEKHG4Q58EX7 1191 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 TCERG1LQ5VWI1 586 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 CCDC70Q6NSX1 233 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 IRF2BP2Q7Z5L9 587 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 DDX53Q86TM3 631 aaKnown RBP7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 TBC1D5Q92609 795 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 ZBTB9Q96C00 473 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 REEP2Q9BRK0 252 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 C11orf84Q9BUA3 381 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms