RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 MARSP56192 900 aaKnown RBP14.77□□□□□ -0.05
PCDHGA11-201ENST00000398587 ECM1Q16610 540 aa14.77□□□□□ -0.05
PCDHGA11-201ENST00000398587 ARSHQ5FYA8 562 aa14.77□□□□□ -0.05
PCDHGA11-201ENST00000398587 RGS9BPQ6ZS82 235 aa14.77□□□□□ -0.05
PCDHGA11-201ENST00000398587 ZDHHC17Q8IUH5 632 aa14.77□□□□□ -0.05
PCDHGA11-201ENST00000398587 PIP4K2CQ8TBX8 421 aa14.77□□□□□ -0.05
PCDHGA11-201ENST00000398587 SHC3Q92529 594 aa14.77□□□□□ -0.05
PCDHGA11-201ENST00000398587 PCDHB7Q9Y5E2 793 aa14.77□□□□□ -0.05
PCDHGA11-201ENST00000398587 IRF6O14896 467 aa14.77□□□□□ -0.05
PCDHGA11-201ENST00000398587 TGFB1I1O43294 461 aa14.77□□□□□ -0.05
PCDHGA11-201ENST00000398587 KLHL2O95198 593 aa14.77□□□□□ -0.05
PCDHGA11-201ENST00000398587 LGALS2P05162 132 aa14.77□□□□□ -0.05
PCDHGA11-201ENST00000398587 PTK6Q13882 451 aa14.77□□□□□ -0.05
PCDHGA11-201ENST00000398587 CELF3Q5SZQ8 465 aaKnown RBP14.77□□□□□ -0.05
PCDHGA11-201ENST00000398587 TDRD10Q5VZ19 366 aaKnown RBP14.77□□□□□ -0.05
PCDHGA11-201ENST00000398587 FAM71AQ8IYT1 594 aa14.77□□□□□ -0.05
PCDHGA11-201ENST00000398587 DNAJB3Q8WWF6 145 aa14.77□□□□□ -0.05
PCDHGA11-201ENST00000398587 ELMO3Q96BJ8 720 aa14.77□□□□□ -0.05
PCDHGA11-201ENST00000398587 CCDC124Q96CT7 223 aaKnown RBP14.77□□□□□ -0.05
PCDHGA11-201ENST00000398587 PRDM5Q9NQX1 630 aaPredicted RBP14.77□□□□□ -0.05
PCDHGA11-201ENST00000398587 PPFIA2O75334 1257 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 HMGCRP04035 888 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 TGM2P21980 687 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 GEMP55040 296 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 KRT33BQ14525 404 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 TMEM132BQ14DG7 1078 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 AENQ8WTP8 325 aaKnown RBP14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 TRIM4Q9C037 500 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 CDY2AQ9Y6F7 541 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 CDY1Q9Y6F8 540 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 MANSC4A6NHS7 340 aaPredicted RBP14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 BTNL10A8MVZ5 291 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 CDH8P55286 799 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 ACAP1Q15027 740 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 NFE2Q16621 373 aaPredicted RBP14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 SLC25A41Q8N5S1 370 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 ARMC2Q8NEN0 867 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 SLC26A7Q8TE54 656 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 KRT82Q9NSB4 513 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 XRN1Q8IZH2 1706 aaKnown RBP14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 SPATA31C2B4DYI2 1134 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 PMPCBO75439 489 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 ALDH1A1P00352 501 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 RABGAP1LQ5R372 815 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 MFSD7Q6UXD7 560 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 DENND5BQ6ZUT9 1274 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 TMC3Q7Z5M5 1100 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 KCNV2Q8TDN2 545 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 NCLNQ969V3 563 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 MUC3BQ9H195 1237 aa14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.76□□□□□ -0.05
PCDHGA11-201ENST00000398587 PYGLP06737 847 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 ACVR2BQ13705 512 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 SNX19Q92543 992 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 MTBPQ96DY7 904 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 FAM111AQ96PZ2 611 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 GDF3Q9NR23 364 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 SLC39A10Q9ULF5 831 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 DNAJC6O75061 913 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 ALDH1A3P47895 512 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 RPRD1AQ96P16 312 aaPredicted RBP14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 SYT15Q9BQS2 421 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 LRRC40Q9H9A6 602 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 AAR2Q9Y312 384 aaKnown RBP14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 PDE2AO00408 941 aaPredicted RBP14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 KCNA2P16389 499 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 ADCYAP1R1P41586 468 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 TBCCQ15814 346 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 ANO5Q75V66 913 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 TLK2Q86UE8 772 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 L3MBTL3Q96JM7 780 aaPredicted RBP14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 PURBQ96QR8 312 aaKnown RBP14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 MTG1Q9BT17 334 aaPredicted RBP14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 GPBP1L1Q9HC44 474 aaPredicted RBP14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 ASTN2O75129 1339 aaPredicted RBP14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 A0A0U1RQJ8 604 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 DNALI1O14645 258 aaPredicted RBP14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 MAFO75444 373 aaPredicted RBP14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 APOA4P06727 396 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 EEF1B2P24534 225 aaKnown RBP14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 RPL21P46778 160 aaKnown RBP14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 TKTL1P51854 596 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 MAP3K7CLP57077 242 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 ITGB3BPQ13352 177 aaPredicted RBP14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 CHI3L2Q15782 390 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 PAN2Q504Q3 1202 aaKnown RBP14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 MDH1BQ5I0G3 518 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 SLC26A11Q86WA9 606 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 C12orf56Q8IXR9 622 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 INPP4AQ96PE3 977 aaPredicted RBP14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 PAFAH2Q99487 392 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 MTIF3Q9H2K0 278 aaKnown RBP14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 PCDHB8Q9UN66 801 aa14.75□□□□□ -0.05
PCDHGA11-201ENST00000398587 PARP4Q9UKK3 1724 aaKnown RBP14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 AFDNP55196 1824 aaKnown RBP14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 RCCD1A6NED2 376 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 MICAL2O94851 1124 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 ANP32DO95626 131 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 ALDH7A1P49419 539 aaKnown RBP14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 MFSD10Q14728 455 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms