RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 SMOQ99835 787 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 FBXO44Q9H4M3 255 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 FNIP2Q9P278 1114 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 TMEM59LQ9UK28 342 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 TTC7AQ9ULT0 858 aaPredicted RBP19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 VWA8A3KMH1 1905 aa19.98■□□□□ 0.79
TSPAN4-204ENST00000397404 PTPRDP23468 1912 aa19.98■□□□□ 0.79
TSPAN4-204ENST00000397404 NT5C1B-RDH14C9J2C7 533 aa19.98■□□□□ 0.79
TSPAN4-204ENST00000397404 CLDN5O00501 218 aa19.98■□□□□ 0.79
TSPAN4-204ENST00000397404 TLL1O43897 1013 aa19.98■□□□□ 0.79
TSPAN4-204ENST00000397404 SLU7O95391 586 aaKnown RBP19.98■□□□□ 0.79
TSPAN4-204ENST00000397404 C1RP00736 705 aa19.98■□□□□ 0.79
TSPAN4-204ENST00000397404 CPB1P15086 417 aa19.98■□□□□ 0.79
TSPAN4-204ENST00000397404 GPD1P21695 349 aa19.98■□□□□ 0.79
TSPAN4-204ENST00000397404 CETN2P41208 172 aa19.98■□□□□ 0.79
TSPAN4-204ENST00000397404 PTPN9P43378 593 aa19.98■□□□□ 0.79
TSPAN4-204ENST00000397404 TUFMP49411 452 aaKnown RBP19.98■□□□□ 0.79
TSPAN4-204ENST00000397404 RGS7P49802 495 aa19.98■□□□□ 0.79
TSPAN4-204ENST00000397404 RPL10AP62906 217 aaKnown RBP19.98■□□□□ 0.79
TSPAN4-204ENST00000397404 UBE3AQ05086 875 aa19.98■□□□□ 0.79
TSPAN4-204ENST00000397404 RTP2Q5QGT7 225 aa19.98■□□□□ 0.79
TSPAN4-204ENST00000397404 FAM117BQ6P1L5 589 aa19.98■□□□□ 0.79
TSPAN4-204ENST00000397404 LRRTM3Q86VH5 581 aa19.98■□□□□ 0.79
TSPAN4-204ENST00000397404 FBXO22Q8NEZ5 403 aa19.98■□□□□ 0.79
TSPAN4-204ENST00000397404 METTL5Q9NRN9 209 aaKnown RBP19.98■□□□□ 0.79
TSPAN4-204ENST00000397404 C2CD4BA6NLJ0 364 aa19.97■□□□□ 0.79
TSPAN4-204ENST00000397404 GOLGA8SH3BPF8 625 aa19.97■□□□□ 0.79
TSPAN4-204ENST00000397404 RB1P06400 928 aa19.97■□□□□ 0.79
TSPAN4-204ENST00000397404 KRT7P08729 469 aa19.97■□□□□ 0.79
TSPAN4-204ENST00000397404 BDNFP23560 247 aa19.97■□□□□ 0.79
TSPAN4-204ENST00000397404 PSMA2P25787 234 aa19.97■□□□□ 0.79
TSPAN4-204ENST00000397404 SDC4P31431 198 aa19.97■□□□□ 0.79
TSPAN4-204ENST00000397404 RFC1P35251 1148 aaPredicted RBP19.97■□□□□ 0.79
TSPAN4-204ENST00000397404 RWDD2BP57060 319 aa19.97■□□□□ 0.79
TSPAN4-204ENST00000397404 RPL7AP62424 266 aaKnown RBP19.97■□□□□ 0.79
TSPAN4-204ENST00000397404 C2CD6Q53TS8 623 aa19.97■□□□□ 0.79
TSPAN4-204ENST00000397404 CCDC181Q5TID7 509 aa19.97■□□□□ 0.79
TSPAN4-204ENST00000397404 PM20D1Q6GTS8 502 aa19.97■□□□□ 0.79
TSPAN4-204ENST00000397404 TMEM173Q86WV6 379 aaPredicted RBP19.97■□□□□ 0.79
TSPAN4-204ENST00000397404 ARHGAP18Q8N392 663 aa19.97■□□□□ 0.79
TSPAN4-204ENST00000397404 SPATA17Q96L03 361 aa19.97■□□□□ 0.79
TSPAN4-204ENST00000397404 MRPL17Q9NRX2 175 aaKnown RBP19.97■□□□□ 0.79
TSPAN4-204ENST00000397404 DDX56Q9NY93 547 aaKnown RBP19.97■□□□□ 0.79
TSPAN4-204ENST00000397404 USP3Q9Y6I4 520 aa19.97■□□□□ 0.79
TSPAN4-204ENST00000397404 KCNK3O14649 394 aa19.96■□□□□ 0.79
TSPAN4-204ENST00000397404 RTN3O95197 1032 aaPredicted RBP19.96■□□□□ 0.79
TSPAN4-204ENST00000397404 ZBED1O96006 694 aa19.96■□□□□ 0.79
TSPAN4-204ENST00000397404 PDGFRAP16234 1089 aa19.96■□□□□ 0.79
TSPAN4-204ENST00000397404 GRIK1P39086 918 aa19.96■□□□□ 0.79
TSPAN4-204ENST00000397404 TKTL1P51854 596 aa19.96■□□□□ 0.79
TSPAN4-204ENST00000397404 EPHB4P54760 987 aa19.96■□□□□ 0.79
TSPAN4-204ENST00000397404 YWHAZP63104 245 aaKnown RBP19.96■□□□□ 0.79
TSPAN4-204ENST00000397404 ADIGQ0VDE8 80 aa19.96■□□□□ 0.79
TSPAN4-204ENST00000397404 ZNF572Q7Z3I7 529 aaPredicted RBP19.96■□□□□ 0.79
TSPAN4-204ENST00000397404 SCUBE3Q8IX30 993 aa19.96■□□□□ 0.79
TSPAN4-204ENST00000397404 ACTRT1Q8TDG2 376 aa19.96■□□□□ 0.79
TSPAN4-204ENST00000397404 BCL7CQ8WUZ0 217 aaPredicted RBP19.96■□□□□ 0.79
TSPAN4-204ENST00000397404 RIN2Q8WYP3 895 aaPredicted RBP19.96■□□□□ 0.79
TSPAN4-204ENST00000397404 LPIN3Q9BQK8 851 aa19.96■□□□□ 0.79
TSPAN4-204ENST00000397404 POPDC2Q9HBU9 364 aa19.96■□□□□ 0.79
TSPAN4-204ENST00000397404 HCSTQ9UBK5 93 aa19.96■□□□□ 0.79
TSPAN4-204ENST00000397404 AFF4Q9UHB7 1163 aaKnown RBP19.96■□□□□ 0.79
TSPAN4-204ENST00000397404 STAP1Q9ULZ2 295 aa19.96■□□□□ 0.79
TSPAN4-204ENST00000397404 PTPRSQ13332 1948 aa19.96■□□□□ 0.79
TSPAN4-204ENST00000397404 NLRC5Q86WI3 1866 aa19.96■□□□□ 0.79
TSPAN4-204ENST00000397404 MKI67P46013 3256 aaKnown RBP19.95■□□□□ 0.78
TSPAN4-204ENST00000397404 HHLA1C9JL84 531 aa19.95■□□□□ 0.78
TSPAN4-204ENST00000397404 TULP2O00295 520 aa19.95■□□□□ 0.78
TSPAN4-204ENST00000397404 DAB1O75553 588 aa19.95■□□□□ 0.78
TSPAN4-204ENST00000397404 LCP1P13796 627 aa19.95■□□□□ 0.78
TSPAN4-204ENST00000397404 PPP2R5EQ16537 467 aa19.95■□□□□ 0.78
TSPAN4-204ENST00000397404 RTL10Q7L3V2 364 aa19.95■□□□□ 0.78
TSPAN4-204ENST00000397404 ZMIZ2Q8NF64 920 aa19.95■□□□□ 0.78
TSPAN4-204ENST00000397404 MAIP1Q8WWC4 291 aa19.95■□□□□ 0.78
TSPAN4-204ENST00000397404 TBCBQ99426 244 aa19.95■□□□□ 0.78
TSPAN4-204ENST00000397404 TMLHEQ9NVH6 421 aa19.95■□□□□ 0.78
TSPAN4-204ENST00000397404 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.95■□□□□ 0.783e-6■■■□□ 18.3
TSPAN4-204ENST00000397404 CXXC1Q9P0U4 656 aaPredicted RBP19.95■□□□□ 0.78
TSPAN4-204ENST00000397404 ZMYND8Q9ULU4 1186 aaPredicted RBP19.95■□□□□ 0.78
TSPAN4-204ENST00000397404 MTMR11A4FU01 709 aa19.94■□□□□ 0.78
TSPAN4-204ENST00000397404 BEST1O76090 585 aa19.94■□□□□ 0.78
TSPAN4-204ENST00000397404 FGF18O76093 207 aa19.94■□□□□ 0.78
TSPAN4-204ENST00000397404 SYN1P17600 705 aa19.94■□□□□ 0.78
TSPAN4-204ENST00000397404 NOS2P35228 1153 aa19.94■□□□□ 0.78
TSPAN4-204ENST00000397404 PBX3P40426 434 aa19.94■□□□□ 0.78
TSPAN4-204ENST00000397404 MATKP42679 507 aa19.94■□□□□ 0.78
TSPAN4-204ENST00000397404 PSEN1P49768 467 aa19.94■□□□□ 0.78
TSPAN4-204ENST00000397404 DAOAP59103 153 aa19.94■□□□□ 0.78
TSPAN4-204ENST00000397404 COPS2P61201 443 aa19.94■□□□□ 0.78
TSPAN4-204ENST00000397404 SEL1L2Q5TEA6 688 aa19.94■□□□□ 0.78
TSPAN4-204ENST00000397404 STRADAQ7RTN6 431 aa19.94■□□□□ 0.78
TSPAN4-204ENST00000397404 VSIG1Q86XK7 387 aa19.94■□□□□ 0.78
TSPAN4-204ENST00000397404 KATNAL2Q8IYT4 538 aa19.94■□□□□ 0.78
TSPAN4-204ENST00000397404 RASGEF1CQ8N431 466 aa19.94■□□□□ 0.78
TSPAN4-204ENST00000397404 ZNF461Q8TAF7 563 aa19.94■□□□□ 0.78
TSPAN4-204ENST00000397404 TMEM209Q96SK2 561 aa19.94■□□□□ 0.78
TSPAN4-204ENST00000397404 DDX23Q9BUQ8 820 aaKnown RBP19.94■□□□□ 0.78
TSPAN4-204ENST00000397404 RXFP1Q9HBX9 757 aa19.94■□□□□ 0.78
TSPAN4-204ENST00000397404 ABI2Q9NYB9 513 aaPredicted RBP19.94■□□□□ 0.78
TSPAN4-204ENST00000397404 CHORDC1Q9UHD1 332 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms