RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 BUB1BO60566 1050 aaPredicted RBP14.38□□□□□ -0.11
VAPB-202ENST00000395802 UQCRHP07919 91 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 OR4Q2P0C623 313 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 LINC00271P0C7V0 271 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 LCP1P13796 627 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 MAN1A1P33908 653 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 OR1D2P34982 312 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 NDUFV1P49821 464 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 TKTL1P51854 596 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 MESDQ14696 234 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 RAB30Q15771 203 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 RAB41Q5JT25 222 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 PPP1R15BQ5SWA1 713 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 SCML4Q8N228 414 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 MCEEQ96PE7 176 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 KCNK16Q96T55 309 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 EMILIN2Q9BXX0 1053 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 FBXO44Q9H4M3 255 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 ASNSD1Q9NWL6 643 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.38□□□□□ -0.11
VAPB-202ENST00000395802 MRFAP1Q9Y605 127 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 FAM170AA1A519 330 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 MTMR11A4FU01 709 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 F8VP50 259 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 TULP2O00295 520 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 HSF2BPO75031 334 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 BEST1O76090 585 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 CYP2F1P24903 491 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 MRPS5P82675 430 aaKnown RBP14.38□□□□□ -0.11
VAPB-202ENST00000395802 ROR1Q01973 937 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 ADIGQ0VDE8 80 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 RAB33AQ14088 237 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 OLFML1Q6UWY5 402 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 FAM183BPQ6ZVS7 135 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 SLC26A9Q7LBE3 791 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 TMC7Q7Z402 723 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 UBL4BQ8N7F7 174 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 IRGQQ8WZA9 623 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 TGS1Q96RS0 853 aaKnown RBP14.38□□□□□ -0.11
VAPB-202ENST00000395802 GDF15Q99988 308 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 ZBP1Q9H171 429 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 NGRNQ9NPE2 291 aaKnown RBP14.38□□□□□ -0.11
VAPB-202ENST00000395802 COMMD8Q9NX08 183 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 MSRAQ9UJ68 235 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 IRAK3Q9Y616 596 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 ALG6Q9Y672 507 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 LCHNA4D1U4 455 aa14.37□□□□□ -0.11
VAPB-202ENST00000395802 PAPSS1O43252 624 aaPredicted RBP14.37□□□□□ -0.11
VAPB-202ENST00000395802 SPOPO43791 374 aa14.37□□□□□ -0.11
VAPB-202ENST00000395802 PROSCO94903 275 aa14.37□□□□□ -0.11
VAPB-202ENST00000395802 ZBED1O96006 694 aa14.37□□□□□ -0.11
VAPB-202ENST00000395802 ATF2P15336 505 aa14.37□□□□□ -0.11
VAPB-202ENST00000395802 PRLRP16471 622 aa14.37□□□□□ -0.11
VAPB-202ENST00000395802 TCP1P17987 556 aaKnown RBP14.37□□□□□ -0.11
VAPB-202ENST00000395802 ELF1P32519 619 aa14.37□□□□□ -0.11
VAPB-202ENST00000395802 AMPD2Q01433 879 aa14.37□□□□□ -0.11
VAPB-202ENST00000395802 SMC1AQ14683 1233 aaKnown RBP14.37□□□□□ -0.11
VAPB-202ENST00000395802 RPS6KA1Q15418 735 aa14.37□□□□□ -0.11
VAPB-202ENST00000395802 CCDC142Q17RM4 750 aa14.37□□□□□ -0.11
VAPB-202ENST00000395802 MGAT5BQ3V5L5 792 aa14.37□□□□□ -0.11
VAPB-202ENST00000395802 MEI1Q5TIA1 1274 aa14.37□□□□□ -0.11
VAPB-202ENST00000395802 PDE12Q6L8Q7 609 aaKnown RBP14.37□□□□□ -0.11
VAPB-202ENST00000395802 PHLDB2Q86SQ0 1253 aa14.37□□□□□ -0.11
VAPB-202ENST00000395802 SCN4BQ8IWT1 228 aa14.37□□□□□ -0.11
VAPB-202ENST00000395802 ZMIZ2Q8NF64 920 aa14.37□□□□□ -0.11
VAPB-202ENST00000395802 SPATA17Q96L03 361 aa14.37□□□□□ -0.11
VAPB-202ENST00000395802 PGLYRP2Q96PD5 576 aa14.37□□□□□ -0.11
VAPB-202ENST00000395802 CLSTN3Q9BQT9 956 aa14.37□□□□□ -0.11
VAPB-202ENST00000395802 RXFP1Q9HBX9 757 aa14.37□□□□□ -0.11
VAPB-202ENST00000395802 METTL5Q9NRN9 209 aaKnown RBP14.37□□□□□ -0.11
VAPB-202ENST00000395802 TMEM51Q9NW97 253 aa14.37□□□□□ -0.11
VAPB-202ENST00000395802 SAR1BQ9Y6B6 198 aa14.37□□□□□ -0.11
VAPB-202ENST00000395802 WDR27A2RRH5 827 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 CTIFO43310 598 aaKnown RBP14.36□□□□□ -0.11
VAPB-202ENST00000395802 RNF8O76064 485 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 ABLIM3O94929 683 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 RTN3O95197 1032 aaPredicted RBP14.36□□□□□ -0.11
VAPB-202ENST00000395802 ADH1AP07327 375 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 HAPLN1P10915 354 aaPredicted RBP14.36□□□□□ -0.11
VAPB-202ENST00000395802 SDC4P31431 198 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 BMP8BP34820 402 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 CA8P35219 290 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 RABGGTBP53611 331 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 YWHAZP63104 245 aaKnown RBP14.36□□□□□ -0.11
VAPB-202ENST00000395802 ADCY1Q08828 1119 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 RNF19BQ6ZMZ0 732 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 NUP93Q8N1F7 819 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 NIPA2Q8N8Q9 360 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 ATAD1Q8NBU5 361 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 ENTPD7Q9NQZ7 604 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 TLR9Q9NR96 1032 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 RRN3Q9NYV6 651 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 CHORDC1Q9UHD1 332 aaPredicted RBP14.36□□□□□ -0.11
VAPB-202ENST00000395802 CCDC66A2RUB6 948 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 PIK3R2O00459 728 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 ENC1O14682 589 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 C1RP00736 705 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 ATP1A1P05023 1023 aaKnown RBP14.36□□□□□ -0.11
VAPB-202ENST00000395802 CA3P07451 260 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 GPD1P21695 349 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms