RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 SCNN1AP37088 669 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 PNPLA4P41247 253 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 IFNAR2P48551 515 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 CTCFP49711 727 aaPredicted RBP7.53□□□□□ -1.2
SMAD1-202ENST00000394092 SLC18A1P54219 525 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 EIF3EP60228 445 aaKnown RBP7.53□□□□□ -1.2
SMAD1-202ENST00000394092 IL9RQ01113 521 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 ROR1Q01973 937 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 ACTN3Q08043 901 aaPredicted RBP7.53□□□□□ -1.2
SMAD1-202ENST00000394092 KRT81Q14533 505 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 GOLGA7BQ2TAP0 167 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 LACTB2Q53H82 288 aaPredicted RBP7.53□□□□□ -1.2
SMAD1-202ENST00000394092 BOLA3Q53S33 107 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 KCNT1Q5JUK3 1230 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 TMEM63BQ5T3F8 832 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 VSTM1Q6UX27 236 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 C4orf22Q6V702 233 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 DPH6Q7L8W6 267 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 PIGWQ7Z7B1 504 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 SRRM1Q8IYB3 904 aaKnown RBP7.53□□□□□ -1.2
SMAD1-202ENST00000394092 LRRC34Q8IZ02 419 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 ZBED8Q8IZ13 594 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 KIAA0319LQ8IZA0 1049 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 CNPY4Q8N129 248 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 PDIK1LQ8N165 341 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 EMC1Q8N766 993 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 PDCD7Q8N8D1 485 aaKnown RBP7.53□□□□□ -1.2
SMAD1-202ENST00000394092 GBP7Q8N8V2 638 aaPredicted RBP7.53□□□□□ -1.2
SMAD1-202ENST00000394092 STK32AQ8WU08 396 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 CKAP2Q8WWK9 683 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 HSPH1Q92598 858 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 UPF1Q92900 1129 aaKnown RBP eCLIP7.53□□□□□ -1.2
SMAD1-202ENST00000394092 ACSF2Q96CM8 615 aaPredicted RBP7.53□□□□□ -1.2
SMAD1-202ENST00000394092 GRAMD1AQ96CP6 724 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 MS4A4AQ96JQ5 239 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 SYT17Q9BSW7 474 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 TRIM6Q9C030 488 aaPredicted RBP7.53□□□□□ -1.2
SMAD1-202ENST00000394092 GBA2Q9HCG7 927 aaPredicted RBP7.53□□□□□ -1.2
SMAD1-202ENST00000394092 CYLDQ9NQC7 956 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 EURLQ9NYK6 297 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 TJP2Q9UDY2 1190 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 PCSK1NQ9UHG2 260 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 UBQLN1Q9UMX0 589 aaKnown RBP7.53□□□□□ -1.2
SMAD1-202ENST00000394092 NAALADL1Q9UQQ1 740 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 CAPN7Q9Y6W3 813 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.52□□□□□ -1.21
SMAD1-202ENST00000394092 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.52□□□□□ -1.21
SMAD1-202ENST00000394092 SMIM35A0A1B0GVV1 85 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 FAM47DPA6NHR8 397 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 E5RJQ4 531 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 MDM4O15151 490 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 PRPF4O43172 522 aaKnown RBP eCLIP7.52□□□□□ -1.21
SMAD1-202ENST00000394092 CSDE1O75534 798 aaKnown RBP7.52□□□□□ -1.21
SMAD1-202ENST00000394092 SPAG6O75602 509 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 TOMM70O94826 608 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 SUN1O94901 812 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 CD4P01730 458 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 ZSCAN5DPP0CG00 497 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 RBP3P10745 1247 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 YBX3P16989 372 aaKnown RBP eCLIP7.52□□□□□ -1.21
SMAD1-202ENST00000394092 SMPD1P17405 629 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 KRT15P19012 456 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 GBP2P32456 591 aaPredicted RBP7.52□□□□□ -1.21
SMAD1-202ENST00000394092 CDH6P55285 790 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 RNASELQ05823 741 aaKnown RBP7.52□□□□□ -1.21
SMAD1-202ENST00000394092 PDIA2Q13087 525 aaKnown RBP7.52□□□□□ -1.21
SMAD1-202ENST00000394092 ORC1Q13415 861 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 NOMO1Q15155 1222 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 ANKRD20A8PQ5CZ79 823 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 MARCH8Q5T0T0 291 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 FAM183BPQ6ZVS7 135 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 ARFGAP1Q8N6T3 406 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 ANKRD42Q8N9B4 389 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 NAT8LQ8N9F0 302 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 GLIS1Q8NBF1 620 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 UBA3Q8TBC4 463 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 SPATA18Q8TC71 538 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 MGARPQ8TDB4 240 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 PYROXD1Q8WU10 500 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 RXFP2Q8WXD0 754 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 BRI3BPQ8WY22 251 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 MAGEB18Q96M61 343 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 PWWP2AQ96N64 755 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 SMC6Q96SB8 1091 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 ZNF408Q9H9D4 720 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 SSU72Q9NP77 194 aaKnown RBP7.52□□□□□ -1.21
SMAD1-202ENST00000394092 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.52□□□□□ -1.21
SMAD1-202ENST00000394092 CNTN3Q9P232 1028 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 CTNNAL1Q9UBT7 734 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 TBK1Q9UHD2 729 aa7.52□□□□□ -1.21
SMAD1-202ENST00000394092 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.52□□□□□ -1.21
SMAD1-202ENST00000394092 CCT8L1PA6NM43 557 aa7.51□□□□□ -1.21
SMAD1-202ENST00000394092 E7ESA3 106 aa7.51□□□□□ -1.21
SMAD1-202ENST00000394092 APOL1O14791 398 aa7.51□□□□□ -1.21
SMAD1-202ENST00000394092 CHADO15335 359 aa7.51□□□□□ -1.21
SMAD1-202ENST00000394092 SNX3O60493 162 aa7.51□□□□□ -1.21
SMAD1-202ENST00000394092 ENDOD1O94919 500 aa7.51□□□□□ -1.21
SMAD1-202ENST00000394092 F2P00734 622 aa7.51□□□□□ -1.21
SMAD1-202ENST00000394092 ETS1P14921 441 aa7.51□□□□□ -1.21
SMAD1-202ENST00000394092 ZFXP17010 805 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms