RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 FAM200BP0CF97 657 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 SELPP16109 830 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 EIF3BP55884 814 aaKnown RBP14.22□□□□□ -0.13
SEC13-203ENST00000383801 BYSLQ13895 437 aaKnown RBP14.22□□□□□ -0.13
SEC13-203ENST00000383801 TFDP2Q14188 446 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 FAM153CQ494X1 144 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 CCDC14Q49A88 953 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 ATP13A4Q4VNC1 1196 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 OSTM1Q86WC4 334 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 SCUBE3Q8IX30 993 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 FUKQ8N0W3 1084 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 THEM5Q8N1Q8 247 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 SCML4Q8N228 414 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 EMC1Q8N766 993 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 MYCBPAPQ8TBZ2 947 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 URGCPQ8TCY9 931 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 C1orf54Q8WWF1 131 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 RAPGEF5Q92565 580 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 LPPQ93052 612 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 HINFPQ9BQA5 517 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 SYT15Q9BQS2 421 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 TRIM51Q9BSJ1 452 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 C11orf84Q9BUA3 381 aaPredicted RBP14.22□□□□□ -0.13
SEC13-203ENST00000383801 DDX23Q9BUQ8 820 aaKnown RBP14.22□□□□□ -0.13
SEC13-203ENST00000383801 PNPLA8Q9NP80 782 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 CHST7Q9NS84 486 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 RRN3Q9NYV6 651 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 FAM153AQ9UHL3 310 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 NEU2Q9Y3R4 380 aa14.22□□□□□ -0.13
SEC13-203ENST00000383801 A6NNZ2 444 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 AGPSO00116 658 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 SMAPO00193 183 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 LIASO43766 372 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 B3GAT3O94766 335 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 SYF2O95926 243 aaKnown RBP14.21□□□□□ -0.13
SEC13-203ENST00000383801 CCDC130P13994 396 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 IL1R2P27930 398 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 ADORA2BP29275 332 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 FLT3P36888 993 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 RGS7P49802 495 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 KRT17Q04695 432 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 TRADDQ15628 312 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 TUBB8Q3ZCM7 444 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 ZNF365Q70YC5 407 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 TMC3Q7Z5M5 1100 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 DDX42Q86XP3 938 aaKnown RBP eCLIP14.21□□□□□ -0.13
SEC13-203ENST00000383801 SNF8Q96H20 258 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 SUSD3Q96L08 255 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 HEMGNQ9BXL5 484 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 TXLNGYQ9BZA5 131 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 TRPV6Q9H1D0 765 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 DPH5Q9H2P9 285 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 LRRC4Q9HBW1 653 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 CSNK1G1Q9HCP0 422 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 PAK6Q9NQU5 681 aaPredicted RBP14.21□□□□□ -0.13
SEC13-203ENST00000383801 CNGB3Q9NQW8 809 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 TMEM161AQ9NX61 479 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 GRHL1Q9NZI5 618 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 SNX24Q9Y343 169 aa14.21□□□□□ -0.13
SEC13-203ENST00000383801 APOC4-APOC2K7ER74 178 aa14.2□□□□□ -0.14
SEC13-203ENST00000383801 APOC2P02655 101 aa14.2□□□□□ -0.14
SEC13-203ENST00000383801 RARGP13631 454 aa14.2□□□□□ -0.14
SEC13-203ENST00000383801 RDXP35241 583 aaKnown RBP14.2□□□□□ -0.14
SEC13-203ENST00000383801 GGCXP38435 758 aa14.2□□□□□ -0.14
SEC13-203ENST00000383801 MATKP42679 507 aa14.2□□□□□ -0.14
SEC13-203ENST00000383801 RPL21P46778 160 aaKnown RBP14.2□□□□□ -0.14
SEC13-203ENST00000383801 KCNJ1P48048 391 aa14.2□□□□□ -0.14
SEC13-203ENST00000383801 AIF1P55008 147 aa14.2□□□□□ -0.14
SEC13-203ENST00000383801 MRPS5P82675 430 aaKnown RBP14.2□□□□□ -0.14
SEC13-203ENST00000383801 TIGD5Q53EQ6 642 aa14.2□□□□□ -0.14
SEC13-203ENST00000383801 DAB2IPQ5VWQ8 1189 aa14.2□□□□□ -0.14
SEC13-203ENST00000383801 FAM171BQ6P995 826 aa14.2□□□□□ -0.14
SEC13-203ENST00000383801 PAQR9Q6ZVX9 377 aa14.2□□□□□ -0.14
SEC13-203ENST00000383801 LRRC8DQ7L1W4 858 aa14.2□□□□□ -0.14
SEC13-203ENST00000383801 PIGZQ86VD9 579 aa14.2□□□□□ -0.14
SEC13-203ENST00000383801 ZNF784Q8NCA9 323 aaPredicted RBP14.2□□□□□ -0.14
SEC13-203ENST00000383801 TRIM62Q9BVG3 475 aa14.2□□□□□ -0.14
SEC13-203ENST00000383801 MAK16Q9BXY0 300 aaKnown RBP14.2□□□□□ -0.14
SEC13-203ENST00000383801 RNF19AQ9NV58 838 aa14.2□□□□□ -0.14
SEC13-203ENST00000383801 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.2□□□□□ -0.14
SEC13-203ENST00000383801 OGDHLQ9ULD0 1010 aa14.2□□□□□ -0.14
SEC13-203ENST00000383801 TRIM17Q9Y577 477 aa14.2□□□□□ -0.14
SEC13-203ENST00000383801 TULP2O00295 520 aa14.19□□□□□ -0.14
SEC13-203ENST00000383801 HOXA2O43364 376 aa14.19□□□□□ -0.14
SEC13-203ENST00000383801 TRAPPC3O43617 180 aa14.19□□□□□ -0.14
SEC13-203ENST00000383801 ZNF189O75820 626 aaPredicted RBP14.19□□□□□ -0.14
SEC13-203ENST00000383801 GABBR2O75899 941 aa14.19□□□□□ -0.14
SEC13-203ENST00000383801 TCF4P15884 667 aa14.19□□□□□ -0.14
SEC13-203ENST00000383801 ZFXP17010 805 aaPredicted RBP14.19□□□□□ -0.14
SEC13-203ENST00000383801 STIP1P31948 543 aaKnown RBP14.19□□□□□ -0.14
SEC13-203ENST00000383801 NOS2P35228 1153 aa14.19□□□□□ -0.14
SEC13-203ENST00000383801 GJC1P36383 396 aa14.19□□□□□ -0.14
SEC13-203ENST00000383801 ARSEP51690 589 aa14.19□□□□□ -0.14
SEC13-203ENST00000383801 PLTPP55058 493 aa14.19□□□□□ -0.14
SEC13-203ENST00000383801 VCPP55072 806 aaKnown RBP14.19□□□□□ -0.14
SEC13-203ENST00000383801 YWHAZP63104 245 aaKnown RBP14.19□□□□□ -0.14
SEC13-203ENST00000383801 DSC1Q08554 894 aa14.19□□□□□ -0.14
SEC13-203ENST00000383801 OASLQ15646 514 aaKnown RBP14.19□□□□□ -0.14
SEC13-203ENST00000383801 SLC25A52Q3SY17 297 aa14.19□□□□□ -0.14
SEC13-203ENST00000383801 RAB41Q5JT25 222 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms