RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 EPS8L3Q8TE67 593 aaKnown RBP11.33□□□□□ -0.6
NEDD9-201ENST00000379433 CLEC4CQ8WTT0 213 aa11.33□□□□□ -0.6
NEDD9-201ENST00000379433 CAVIN3Q969G5 261 aa11.33□□□□□ -0.6
NEDD9-201ENST00000379433 OSBPL7Q9BZF2 842 aa11.33□□□□□ -0.6
NEDD9-201ENST00000379433 SCN1AP35498 2009 aa11.33□□□□□ -0.6
NEDD9-201ENST00000379433 A0A1B0GUA9 196 aa11.33□□□□□ -0.6
NEDD9-201ENST00000379433 ATP2C2O75185 946 aa11.33□□□□□ -0.6
NEDD9-201ENST00000379433 MCF2P10911 925 aa11.33□□□□□ -0.6
NEDD9-201ENST00000379433 IFNAR2P48551 515 aa11.33□□□□□ -0.6
NEDD9-201ENST00000379433 PSEN2P49810 448 aa11.33□□□□□ -0.6
NEDD9-201ENST00000379433 ITGA8P53708 1063 aa11.33□□□□□ -0.6
NEDD9-201ENST00000379433 PMS2P54278 862 aa11.33□□□□□ -0.6
NEDD9-201ENST00000379433 RBP5P82980 135 aa11.33□□□□□ -0.6
NEDD9-201ENST00000379433 MYO1EQ12965 1108 aa11.33□□□□□ -0.6
NEDD9-201ENST00000379433 SNX32Q86XE0 403 aa11.33□□□□□ -0.6
NEDD9-201ENST00000379433 IQCKQ8N0W5 287 aa11.33□□□□□ -0.6
NEDD9-201ENST00000379433 BCAS4Q8TDM0 211 aa11.33□□□□□ -0.6
NEDD9-201ENST00000379433 EXOC4Q96A65 974 aa11.33□□□□□ -0.6
NEDD9-201ENST00000379433 AASDHPPTQ9NRN7 309 aa11.33□□□□□ -0.6
NEDD9-201ENST00000379433 MTRF1LQ9UGC7 380 aaKnown RBP11.33□□□□□ -0.6
NEDD9-201ENST00000379433 HEY1Q9Y5J3 304 aa11.33□□□□□ -0.6
NEDD9-201ENST00000379433 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.33□□□□□ -0.6
NEDD9-201ENST00000379433 EIF3FO00303 357 aaPredicted RBP11.32□□□□□ -0.6
NEDD9-201ENST00000379433 CLDN5O00501 218 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 IL18RAPO95256 599 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 CALB1P05937 261 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 ATF2P15336 505 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 PDGFRAP16234 1089 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 NR1D1P20393 614 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 IL1R2P27930 398 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 CTGFP29279 349 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 ZNF844Q08AG5 666 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 DUPD1Q68J44 220 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 C1orf228Q6PIY5 440 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 TMEM174Q8WUU8 243 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 MORF4L1Q9UBU8 362 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 NOD1Q9Y239 953 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 NR2E3Q9Y5X4 410 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 CITO14578 2027 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 CDH23Q9H251 3354 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 CST8O60676 142 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 P4HA1P13674 534 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 CETN2P41208 172 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 CCT5P48643 541 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 P3H1Q32P28 736 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 ALS2CLQ60I27 953 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 PLEKHA7Q6IQ23 1121 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 RGMBQ6NW40 437 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 NOTUMQ6P988 496 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 NPNTQ6UXI9 565 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 RASAL3Q86YV0 1011 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 RFX6Q8HWS3 928 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 NT5C1AQ9BXI3 368 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 MRGBPQ9NV56 204 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 CTNNAL1Q9UBT7 734 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 GJD2Q9UKL4 321 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 TMEM191CA6NGB0 347 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 CES2O00748 559 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 GAS8O95995 478 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 MYBL1P10243 752 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 PTGIRP43119 386 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 AARSP49588 968 aaKnown RBP eCLIP11.32□□□□□ -0.6
NEDD9-201ENST00000379433 FLT3LGP49771 235 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 AP3M2P53677 418 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 DEUP1Q05D60 604 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 C1QBPQ07021 282 aaKnown RBP11.32□□□□□ -0.6
NEDD9-201ENST00000379433 PTP4A2Q12974 167 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 GPS1Q13098 491 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 SNX17Q15036 470 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 KBTBD12Q3ZCT8 623 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 SLC27A1Q6PCB7 646 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 TRIM72Q6ZMU5 477 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 ANAPC5Q9UJX4 755 aa11.32□□□□□ -0.6
NEDD9-201ENST00000379433 CASTOR2A6NHX0 329 aa11.31□□□□□ -0.6
NEDD9-201ENST00000379433 SLC15A5A6NIM6 579 aa11.31□□□□□ -0.6
NEDD9-201ENST00000379433 RNF8O76064 485 aa11.31□□□□□ -0.6
NEDD9-201ENST00000379433 MSL3P1P0C860 447 aa11.31□□□□□ -0.6
NEDD9-201ENST00000379433 YWHAEP62258 255 aaKnown RBP11.31□□□□□ -0.6
NEDD9-201ENST00000379433 PMF1Q6P1K2 205 aa11.31□□□□□ -0.6
NEDD9-201ENST00000379433 PHF13Q86YI8 300 aaPredicted RBP11.31□□□□□ -0.6
NEDD9-201ENST00000379433 MAFFQ9ULX9 164 aa11.31□□□□□ -0.6
NEDD9-201ENST00000379433 C17orf102A2RUQ5 167 aa11.31□□□□□ -0.6
NEDD9-201ENST00000379433 MED7O43513 233 aa11.31□□□□□ -0.6
NEDD9-201ENST00000379433 AOC2O75106 756 aa11.31□□□□□ -0.6
NEDD9-201ENST00000379433 CILPO75339 1184 aa11.31□□□□□ -0.6
NEDD9-201ENST00000379433 TFE3P19532 575 aaPredicted RBP11.31□□□□□ -0.6
NEDD9-201ENST00000379433 ARSEP51690 589 aa11.31□□□□□ -0.6
NEDD9-201ENST00000379433 CDH6P55285 790 aa11.31□□□□□ -0.6
NEDD9-201ENST00000379433 IFI35P80217 286 aaPredicted RBP11.31□□□□□ -0.6
NEDD9-201ENST00000379433 SIX1Q15475 284 aaPredicted RBP11.31□□□□□ -0.6
NEDD9-201ENST00000379433 FAXCQ5TGI0 409 aa11.31□□□□□ -0.6
NEDD9-201ENST00000379433 ZDHHC24Q6UX98 284 aa11.31□□□□□ -0.6
NEDD9-201ENST00000379433 IFNL1Q8IU54 200 aa11.31□□□□□ -0.6
NEDD9-201ENST00000379433 ARRDC4Q8NCT1 418 aa11.31□□□□□ -0.6
NEDD9-201ENST00000379433 NACC2Q96BF6 587 aa11.31□□□□□ -0.6
NEDD9-201ENST00000379433 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.31□□□□□ -0.6
NEDD9-201ENST00000379433 GRHL1Q9NZI5 618 aa11.31□□□□□ -0.6
NEDD9-201ENST00000379433 HESX1Q9UBX0 185 aa11.31□□□□□ -0.6
NEDD9-201ENST00000379433 GOLGA8KD6RF30 607 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 E7EVH7 732 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms