RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 NFICP08651 508 aa26.43■■□□□ 1.82
C9orf40-201ENST00000376854 SLC8A3P57103 927 aa26.43■■□□□ 1.82
C9orf40-201ENST00000376854 ROR1Q01973 937 aa26.43■■□□□ 1.82
C9orf40-201ENST00000376854 OVGP1Q12889 678 aa26.43■■□□□ 1.82
C9orf40-201ENST00000376854 MMRN1Q13201 1228 aa26.43■■□□□ 1.82
C9orf40-201ENST00000376854 NAA25Q14CX7 972 aa26.43■■□□□ 1.82
C9orf40-201ENST00000376854 ACAP1Q15027 740 aa26.43■■□□□ 1.82
C9orf40-201ENST00000376854 DARS2Q6PI48 645 aaKnown RBP26.43■■□□□ 1.82
C9orf40-201ENST00000376854 NPNTQ6UXI9 565 aa26.43■■□□□ 1.82
C9orf40-201ENST00000376854 MTDHQ86UE4 582 aaKnown RBP26.43■■□□□ 1.82
C9orf40-201ENST00000376854 LONP2Q86WA8 852 aa26.43■■□□□ 1.82
C9orf40-201ENST00000376854 ZNF570Q96NI8 536 aa26.43■■□□□ 1.82
C9orf40-201ENST00000376854 ELOVL4Q9GZR5 314 aa26.43■■□□□ 1.82
C9orf40-201ENST00000376854 CDT1Q9H211 546 aa26.43■■□□□ 1.82
C9orf40-201ENST00000376854 ASNSD1Q9NWL6 643 aa26.43■■□□□ 1.82
C9orf40-201ENST00000376854 M0QYV0 167 aa26.43■■□□□ 1.82
C9orf40-201ENST00000376854 NOP56O00567 594 aaKnown RBP26.43■■□□□ 1.82
C9orf40-201ENST00000376854 IL18RAPO95256 599 aa26.43■■□□□ 1.82
C9orf40-201ENST00000376854 ZC3H18Q86VM9 953 aaKnown RBP26.43■■□□□ 1.82
C9orf40-201ENST00000376854 FAM13CQ8NE31 585 aa26.43■■□□□ 1.82
C9orf40-201ENST00000376854 TRAPPC12Q8WVT3 735 aa26.43■■□□□ 1.82
C9orf40-201ENST00000376854 ADPGKQ9BRR6 497 aa26.43■■□□□ 1.82
C9orf40-201ENST00000376854 ALG13Q9NP73 1137 aaKnown RBP26.43■■□□□ 1.82
C9orf40-201ENST00000376854 PTPRFP10586 1907 aa26.42■■□□□ 1.82
C9orf40-201ENST00000376854 FAM102AQ5T9C2 384 aaPredicted RBP26.42■■□□□ 1.82
C9orf40-201ENST00000376854 RFWD2Q8NHY2 731 aa26.42■■□□□ 1.82
C9orf40-201ENST00000376854 TMEM176AQ96HP8 235 aa26.42■■□□□ 1.82
C9orf40-201ENST00000376854 PEBP4Q96S96 227 aa26.42■■□□□ 1.82
C9orf40-201ENST00000376854 IKBKGQ9Y6K9 419 aa26.42■■□□□ 1.82
C9orf40-201ENST00000376854 IQANK1A0A1B0GTG1 560 aa26.42■■□□□ 1.82
C9orf40-201ENST00000376854 LPXNO60711 386 aa26.42■■□□□ 1.82
C9orf40-201ENST00000376854 PGK2P07205 417 aa26.42■■□□□ 1.82
C9orf40-201ENST00000376854 EPHB2P29323 1055 aa26.42■■□□□ 1.82
C9orf40-201ENST00000376854 STIP1P31948 543 aaKnown RBP26.42■■□□□ 1.82
C9orf40-201ENST00000376854 GABRB2P47870 512 aa26.42■■□□□ 1.82
C9orf40-201ENST00000376854 PTK7Q13308 1070 aa26.42■■□□□ 1.82
C9orf40-201ENST00000376854 CRYMQ14894 314 aa26.42■■□□□ 1.82
C9orf40-201ENST00000376854 MAB21L3Q8N8X9 362 aa26.42■■□□□ 1.82
C9orf40-201ENST00000376854 SGIP1Q9BQI5 828 aa26.42■■□□□ 1.82
C9orf40-201ENST00000376854 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.42■■□□□ 1.82
C9orf40-201ENST00000376854 TCRBV9S1A1TA0A576 114 aa26.41■■□□□ 1.82
C9orf40-201ENST00000376854 ADM5C9JUS6 153 aa26.41■■□□□ 1.82
C9orf40-201ENST00000376854 TRAFD1O14545 582 aaPredicted RBP26.41■■□□□ 1.82
C9orf40-201ENST00000376854 CILPO75339 1184 aa26.41■■□□□ 1.82
C9orf40-201ENST00000376854 LGR5O75473 907 aa26.41■■□□□ 1.82
C9orf40-201ENST00000376854 ITGB3P05106 788 aa26.41■■□□□ 1.82
C9orf40-201ENST00000376854 CDH6P55285 790 aa26.41■■□□□ 1.82
C9orf40-201ENST00000376854 R3HDM1Q15032 1099 aaKnown RBP26.41■■□□□ 1.82
C9orf40-201ENST00000376854 ANKRD20A2Q5SQ80 823 aa26.41■■□□□ 1.82
C9orf40-201ENST00000376854 ANKRD20A1Q5TYW2 823 aa26.41■■□□□ 1.82
C9orf40-201ENST00000376854 ANKRD20A3Q5VUR7 823 aa26.41■■□□□ 1.82
C9orf40-201ENST00000376854 CLNKQ7Z7G1 428 aa26.41■■□□□ 1.82
C9orf40-201ENST00000376854 KIRREL3Q8IZU9 778 aa26.41■■□□□ 1.82
C9orf40-201ENST00000376854 PTPRN2Q92932 1015 aa26.41■■□□□ 1.82
C9orf40-201ENST00000376854 MIEF2Q96C03 454 aa26.41■■□□□ 1.82
C9orf40-201ENST00000376854 STAU2Q9NUL3 570 aaKnown RBP eCLIP26.41■■□□□ 1.82
C9orf40-201ENST00000376854 KANSL3Q9P2N6 904 aa26.41■■□□□ 1.82
C9orf40-201ENST00000376854 NKX1-2Q9UD57 310 aaPredicted RBP26.41■■□□□ 1.82
C9orf40-201ENST00000376854 KBTBD13C9JR72 458 aa26.4■■□□□ 1.82
C9orf40-201ENST00000376854 PCK1P35558 622 aa26.4■■□□□ 1.82
C9orf40-201ENST00000376854 CCNG1P51959 295 aa26.4■■□□□ 1.82
C9orf40-201ENST00000376854 ZNF200P98182 395 aaPredicted RBP26.4■■□□□ 1.82
C9orf40-201ENST00000376854 NOMO1Q15155 1222 aa26.4■■□□□ 1.82
C9orf40-201ENST00000376854 SYCP2LQ5T4T6 812 aa26.4■■□□□ 1.82
C9orf40-201ENST00000376854 SH3PXD2AQ5TCZ1 1133 aa26.4■■□□□ 1.82
C9orf40-201ENST00000376854 GPC2Q8N158 579 aa26.4■■□□□ 1.82
C9orf40-201ENST00000376854 ZBTB10Q96DT7 871 aa26.4■■□□□ 1.82
C9orf40-201ENST00000376854 MINDY3Q9H8M7 445 aa26.4■■□□□ 1.82
C9orf40-201ENST00000376854 RNPEPL1Q9HAU8 725 aa26.4■■□□□ 1.82
C9orf40-201ENST00000376854 SAR1AQ9NR31 198 aa26.4■■□□□ 1.82
C9orf40-201ENST00000376854 SLC5A4Q9NY91 659 aa26.4■■□□□ 1.82
C9orf40-201ENST00000376854 GPD2P43304 727 aa26.4■■□□□ 1.82
C9orf40-201ENST00000376854 ZNF143P52747 638 aaPredicted RBP26.4■■□□□ 1.82
C9orf40-201ENST00000376854 YWHAGP61981 247 aaKnown RBP eCLIP26.4■■□□□ 1.82
C9orf40-201ENST00000376854 KBTBD12Q3ZCT8 623 aa26.4■■□□□ 1.82
C9orf40-201ENST00000376854 PLPPR4Q7Z2D5 763 aa26.4■■□□□ 1.82
C9orf40-201ENST00000376854 SERAC1Q96JX3 654 aa26.4■■□□□ 1.82
C9orf40-201ENST00000376854 TNFSF13BQ9Y275 285 aa26.4■■□□□ 1.82
C9orf40-201ENST00000376854 NUMBLQ9Y6R0 609 aa26.4■■□□□ 1.82
C9orf40-201ENST00000376854 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP26.39■■□□□ 1.82
C9orf40-201ENST00000376854 LACTBL1A8MY62 500 aa26.39■■□□□ 1.82
C9orf40-201ENST00000376854 INHBAP08476 426 aa26.39■■□□□ 1.82
C9orf40-201ENST00000376854 PTPN4P29074 926 aa26.39■■□□□ 1.82
C9orf40-201ENST00000376854 MBTD1Q05BQ5 628 aa26.39■■□□□ 1.82
C9orf40-201ENST00000376854 WDR78Q5VTH9 848 aa26.39■■□□□ 1.82
C9orf40-201ENST00000376854 JADE1Q6IE81 842 aa26.39■■□□□ 1.82
C9orf40-201ENST00000376854 DPH6Q7L8W6 267 aa26.39■■□□□ 1.82
C9orf40-201ENST00000376854 SLC44A1Q8WWI5 657 aa26.39■■□□□ 1.82
C9orf40-201ENST00000376854 FAXDC2Q96IV6 333 aa26.39■■□□□ 1.82
C9orf40-201ENST00000376854 TSSK1BQ9BXA7 367 aa26.39■■□□□ 1.82
C9orf40-201ENST00000376854 TRIM55Q9BYV6 548 aa26.39■■□□□ 1.82
C9orf40-201ENST00000376854 TEX264Q9Y6I9 313 aa26.39■■□□□ 1.82
C9orf40-201ENST00000376854 A0A0G2JMZ2 1700 aa26.39■■□□□ 1.82
C9orf40-201ENST00000376854 IRF6O14896 467 aa26.39■■□□□ 1.81
C9orf40-201ENST00000376854 PEX11AO75192 247 aa26.39■■□□□ 1.81
C9orf40-201ENST00000376854 CLCN3P51790 818 aa26.39■■□□□ 1.81
C9orf40-201ENST00000376854 FAAP100Q0VG06 881 aa26.39■■□□□ 1.81
C9orf40-201ENST00000376854 KCNJ11Q14654 390 aa26.39■■□□□ 1.81
C9orf40-201ENST00000376854 CTC1Q2NKJ3 1217 aa26.39■■□□□ 1.81
C9orf40-201ENST00000376854 CELF3Q5SZQ8 465 aaKnown RBP26.39■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms