RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 MUTP22033 750 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 MMP14P50281 582 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 BACE1P56817 501 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 STX3Q13277 289 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 PDK4Q16654 411 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 ATG16L1Q676U5 607 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 HEATR6Q6AI08 1181 aaKnown RBP14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 NDE1Q9NXR1 346 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 APOBEC2Q9Y235 224 aaKnown RBP14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 ATXN2Q99700 1313 aaKnown RBP14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 STK10O94804 968 aaKnown RBP14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 MSX2P35548 267 aaPredicted RBP14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 HSD17B4P51659 736 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 ZNF268Q14587 947 aaPredicted RBP14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 FAM131BQ86XD5 332 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 KCTD17Q8N5Z5 321 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 TEX9Q8N6V9 391 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 SCG3Q8WXD2 468 aaKnown RBP14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 CNKSR2Q8WXI2 1034 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 PRR11Q96HE9 360 aaPredicted RBP14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 SYT11Q9BT88 431 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 TIPINQ9BVW5 301 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 ZNF536O15090 1300 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 PLCH1Q4KWH8 1693 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 HMGCRP04035 888 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 CAPSQ13938 189 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 CYP1B1Q16678 543 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 SPDYCQ5MJ68 293 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 FBXO16Q8IX29 292 aaPredicted RBP14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 CDKL2Q92772 493 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 CPXM1Q96SM3 734 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 KLK14Q9P0G3 267 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 SLC17A6Q9P2U8 582 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 FNDC3AQ9Y2H6 1198 aaKnown RBP14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 TMEM191CA6NGB0 347 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 UGT1A9O60656 530 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 HSPA4LO95757 839 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 C4BPAP04003 597 aaKnown RBP14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 GNAT1P11488 350 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 BTKQ06187 659 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 PEX6Q13608 980 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 PID1Q7Z2X4 250 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 RASSF3Q86WH2 238 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 RNF135Q8IUD6 432 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 CCNYL1Q8N7R7 359 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 SEPT1Q8WYJ6 367 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 GPRASP2Q96D09 838 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 NMUR2Q9GZQ4 415 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 UGT1A7Q9HAW7 530 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 UGT1A10Q9HAW8 530 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 UGT1A8Q9HAW9 530 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 UBP1Q9NZI7 540 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 A8MXQ7 604 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 E5RJQ4 531 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 APOL1O14791 398 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 AIM2O14862 343 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 OGTO15294 1046 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 TMEM63AO94886 807 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 SNRPAP09012 282 aaKnown RBP14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 MMP8P22894 467 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 KDELR1P24390 212 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 PTGER2P43116 358 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 NFIL3Q16649 462 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 RAB3IL1Q8TBN0 382 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 PYDC1Q8WXC3 89 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 CPT1BQ92523 772 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 SGF29Q96ES7 293 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 HPDLQ96IR7 371 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 KLHL8Q9P2G9 620 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 BCORQ6W2J9 1755 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 TCRBV9S1A1TA0A576 114 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 KIF1CO43896 1103 aaKnown RBP14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 LYPLA1O75608 230 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 ASMTLO95671 621 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 TXNP10599 105 aaKnown RBP14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 ARL4AP40617 200 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 GSCP56915 257 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 DPYSL3Q14195 570 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 TMEM132BQ14DG7 1078 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 TCHHL1Q5QJ38 904 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 CLNKQ7Z7G1 428 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 RIBC1Q8N443 379 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 USP33Q8TEY7 942 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 HOXC10Q9NYD6 342 aa14.97□□□□□ -0.01
TNFRSF1B-201ENST00000376259 IVDP26440 423 aa14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 IL1R2P27930 398 aa14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 NAMPTP43490 491 aa14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 SLC25A3Q00325 362 aa14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 LAMTOR4Q0VGL1 99 aa14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 UBAP2LQ14157 1087 aaKnown RBP14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 TMEM192Q8IY95 271 aa14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 FAM172AQ8WUF8 416 aa14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 PTPRN2Q92932 1015 aa14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 MMP19Q99542 508 aa14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 B3GNT5Q9BYG0 378 aa14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 MAN1C1Q9NR34 630 aa14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 CYP39A1Q9NYL5 469 aa14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 GGA3Q9NZ52 723 aa14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 SHOC2Q9UQ13 582 aa14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 LRCH4O75427 683 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms