RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 NUDCD1Q96RS6 583 aa17.71■□□□□ 0.43
PHF1-202ENST00000374516 OSMRQ99650 979 aa17.71■□□□□ 0.43
PHF1-202ENST00000374516 HEMGNQ9BXL5 484 aa17.71■□□□□ 0.43
PHF1-202ENST00000374516 RNF19AQ9NV58 838 aa17.71■□□□□ 0.43
PHF1-202ENST00000374516 HMGXB4Q9UGU5 601 aa17.71■□□□□ 0.43
PHF1-202ENST00000374516 EME2A4GXA9 379 aaPredicted RBP17.71■□□□□ 0.43
PHF1-202ENST00000374516 ENO4A6NNW6 628 aa17.71■□□□□ 0.43
PHF1-202ENST00000374516 ZNF865P0CJ78 1059 aaPredicted RBP17.71■□□□□ 0.43
PHF1-202ENST00000374516 GJC1P36383 396 aa17.71■□□□□ 0.43
PHF1-202ENST00000374516 BEX3Q00994 111 aa17.71■□□□□ 0.43
PHF1-202ENST00000374516 LMNB2Q03252 620 aa17.71■□□□□ 0.43
PHF1-202ENST00000374516 NR1H3Q13133 447 aa17.71■□□□□ 0.43
PHF1-202ENST00000374516 IZUMO3Q5VZ72 239 aa17.71■□□□□ 0.43
PHF1-202ENST00000374516 CYP4F22Q6NT55 531 aa17.71■□□□□ 0.43
PHF1-202ENST00000374516 RGS9BPQ6ZS82 235 aa17.71■□□□□ 0.43
PHF1-202ENST00000374516 ENDOVQ8N8Q3 282 aaKnown RBP17.71■□□□□ 0.43
PHF1-202ENST00000374516 DDX27Q96GQ7 796 aaKnown RBP17.71■□□□□ 0.43
PHF1-202ENST00000374516 TWNKQ96RR1 684 aa17.71■□□□□ 0.43
PHF1-202ENST00000374516 RBM15Q96T37 977 aaKnown RBP eCLIP17.71■□□□□ 0.43
PHF1-202ENST00000374516 ADPGKQ9BRR6 497 aa17.71■□□□□ 0.43
PHF1-202ENST00000374516 YIPF3Q9GZM5 350 aa17.71■□□□□ 0.43
PHF1-202ENST00000374516 UBN1Q9NPG3 1134 aa17.71■□□□□ 0.43
PHF1-202ENST00000374516 PARVAQ9NVD7 372 aa17.71■□□□□ 0.43
PHF1-202ENST00000374516 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.71■□□□□ 0.43
PHF1-202ENST00000374516 ABHD2P08910 425 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 GCAP28676 217 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 RASSF2P50749 326 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 TAS2R40P59535 323 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 KLF1Q13351 362 aaPredicted RBP17.7■□□□□ 0.42
PHF1-202ENST00000374516 SPARCL1Q14515 664 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 TMEM132DQ14C87 1099 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 CCNG2Q16589 344 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 CYP4A22Q5TCH4 519 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 DENND1BQ6P3S1 775 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 TMEM35BQ8NCS4 154 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 ADAMTS10Q9H324 1103 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 ASB7Q9H672 318 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 HES2Q9Y543 173 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 DPPA5A6NC42 116 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 PRPF4O43172 522 aaKnown RBP eCLIP17.7■□□□□ 0.428e-8■■■■□ 21.5
PHF1-202ENST00000374516 NPTXRO95502 500 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 F2P00734 622 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 RALAP11233 206 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 HOXA11P31270 313 aaPredicted RBP17.7■□□□□ 0.42
PHF1-202ENST00000374516 PCK1P35558 622 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 SLC1A1P43005 524 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 SLC18A1P54219 525 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 ZNF200P98182 395 aaPredicted RBP17.7■□□□□ 0.42
PHF1-202ENST00000374516 WASHC2DQ5SRD0 308 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 ZNF410Q86VK4 478 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 FEZF2Q8TBJ5 459 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 HPDLQ96IR7 371 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 FAM118BQ9BPY3 351 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 GRID1Q9ULK0 1009 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.7■□□□□ 0.42
PHF1-202ENST00000374516 SCINQ9Y6U3 715 aa17.7■□□□□ 0.42
PHF1-202ENST00000374516 EXOC1LA0A1B0GW35 172 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 RRN3P2A6NIE6 340 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 EDF1O60869 148 aaKnown RBP17.69■□□□□ 0.42
PHF1-202ENST00000374516 UPP2O95045 317 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 CYP2C9P11712 490 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 ATP6V1C1P21283 382 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 PDK4Q16654 411 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 ZNF449Q6P9G9 518 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 DPH6Q7L8W6 267 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 CATSPER4Q7RTX7 472 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 KIF12Q96FN5 646 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 CFAP57Q96MR6 1250 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 MCEEQ96PE7 176 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 BCO2Q9BYV7 579 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 SNTG2Q9NY99 539 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 TJP2Q9UDY2 1190 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 NRCAMQ92823 1304 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 TRAFD1O14545 582 aaPredicted RBP17.69■□□□□ 0.42
PHF1-202ENST00000374516 GPR32O75388 356 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 CBX6O95503 412 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 TCF4P15884 667 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 EPHB2P29323 1055 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 CMPK2Q5EBM0 449 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 SAPCD2Q86UD0 394 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.69■□□□□ 0.42
PHF1-202ENST00000374516 ZCCHC9Q8N567 271 aaKnown RBP17.69■□□□□ 0.42
PHF1-202ENST00000374516 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.69■□□□□ 0.42
PHF1-202ENST00000374516 DNAJB3Q8WWF6 145 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 EIF2AQ9BY44 585 aaKnown RBP17.69■□□□□ 0.42
PHF1-202ENST00000374516 TRABDQ9H4I3 376 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 DPP3Q9NY33 737 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 CYTH4Q9UIA0 394 aa17.69■□□□□ 0.42
PHF1-202ENST00000374516 MANSC4A6NHS7 340 aaPredicted RBP17.68■□□□□ 0.42
PHF1-202ENST00000374516 LSM8O95777 96 aaKnown RBP17.68■□□□□ 0.42
PHF1-202ENST00000374516 MYL3P08590 195 aa17.68■□□□□ 0.42
PHF1-202ENST00000374516 RPA3P35244 121 aaPredicted RBP17.68■□□□□ 0.42
PHF1-202ENST00000374516 PTDSS1P48651 473 aaKnown RBP17.68■□□□□ 0.42
PHF1-202ENST00000374516 MFSD10Q14728 455 aa17.68■□□□□ 0.42
PHF1-202ENST00000374516 ATP13A4Q4VNC1 1196 aa17.68■□□□□ 0.42
PHF1-202ENST00000374516 C17orf99Q6UX52 265 aa17.68■□□□□ 0.42
PHF1-202ENST00000374516 ANKS1BQ7Z6G8 1248 aa17.68■□□□□ 0.42
PHF1-202ENST00000374516 LMNTD2Q8IXW0 634 aa17.68■□□□□ 0.42
PHF1-202ENST00000374516 C10orf82Q8WW14 230 aa17.68■□□□□ 0.42
PHF1-202ENST00000374516 GCOM2Q9BZD3 368 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms