RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 GNAQP50148 359 aa8.81□□□□□ -1
YBX3-204ENST00000366290 CDK7P50613 346 aa8.81□□□□□ -1
YBX3-204ENST00000366290 SRSF2Q01130 221 aaKnown RBP8.81□□□□□ -1
YBX3-204ENST00000366290 PKN1Q16512 942 aa8.81□□□□□ -1
YBX3-204ENST00000366290 ME3Q16798 604 aa8.81□□□□□ -1
YBX3-204ENST00000366290 TOR2AQ5JU69 321 aa8.81□□□□□ -1
YBX3-204ENST00000366290 FMNL3Q8IVF7 1028 aa8.81□□□□□ -1
YBX3-204ENST00000366290 SRBD1Q8N5C6 995 aaKnown RBP8.81□□□□□ -1
YBX3-204ENST00000366290 FANCBQ8NB91 859 aa8.81□□□□□ -1
YBX3-204ENST00000366290 SCFD2Q8WU76 684 aa8.81□□□□□ -1
YBX3-204ENST00000366290 TBC1D5Q92609 795 aa8.81□□□□□ -1
YBX3-204ENST00000366290 GUCD1Q96NT3 240 aa8.81□□□□□ -1
YBX3-204ENST00000366290 PIGSQ96S52 555 aa8.81□□□□□ -1
YBX3-204ENST00000366290 RMDN3Q96TC7 470 aa8.81□□□□□ -1
YBX3-204ENST00000366290 SEZ6LQ9BYH1 1024 aa8.81□□□□□ -1
YBX3-204ENST00000366290 MTG2Q9H4K7 406 aa8.81□□□□□ -1
YBX3-204ENST00000366290 VAT1LQ9HCJ6 419 aa8.81□□□□□ -1
YBX3-204ENST00000366290 PDGFCQ9NRA1 345 aa8.81□□□□□ -1
YBX3-204ENST00000366290 ZIM2Q9NZV7 527 aa8.81□□□□□ -1
YBX3-204ENST00000366290 TMPRSS11EQ9UL52 423 aa8.81□□□□□ -1
YBX3-204ENST00000366290 NUMBLQ9Y6R0 609 aa8.81□□□□□ -1
YBX3-204ENST00000366290 DDX49Q9Y6V7 483 aaKnown RBP8.81□□□□□ -1
YBX3-204ENST00000366290 MUC3AQ02505 3323 aa8.81□□□□□ -1
YBX3-204ENST00000366290 FRMPD4Q14CM0 1322 aa8.8□□□□□ -1
YBX3-204ENST00000366290 XPOTO43592 962 aaKnown RBP8.8□□□□□ -1
YBX3-204ENST00000366290 PCDHGA12O60330 932 aa8.8□□□□□ -1
YBX3-204ENST00000366290 CABYRO75952 493 aa8.8□□□□□ -1
YBX3-204ENST00000366290 ASGR1P07306 291 aa8.8□□□□□ -1
YBX3-204ENST00000366290 PFKMP08237 780 aa8.8□□□□□ -1
YBX3-204ENST00000366290 NFATC3Q12968 1075 aa8.8□□□□□ -1
YBX3-204ENST00000366290 PPP2R5AQ15172 486 aa8.8□□□□□ -1
YBX3-204ENST00000366290 TRIM60Q495X7 471 aa8.8□□□□□ -1
YBX3-204ENST00000366290 TMTC3Q6ZXV5 915 aa8.8□□□□□ -1
YBX3-204ENST00000366290 NOL8Q76FK4 1167 aaKnown RBP8.8□□□□□ -1
YBX3-204ENST00000366290 TLK2Q86UE8 772 aa8.8□□□□□ -1
YBX3-204ENST00000366290 ZNF274Q96GC6 653 aaPredicted RBP8.8□□□□□ -1
YBX3-204ENST00000366290 RAX2Q96IS3 184 aa8.8□□□□□ -1
YBX3-204ENST00000366290 TAAR1Q96RJ0 339 aa8.8□□□□□ -1
YBX3-204ENST00000366290 WDR11Q9BZH6 1224 aa8.8□□□□□ -1
YBX3-204ENST00000366290 KCTD10Q9H3F6 313 aa8.8□□□□□ -1
YBX3-204ENST00000366290 PRDM12Q9H4Q4 367 aa8.8□□□□□ -1
YBX3-204ENST00000366290 STARD7Q9NQZ5 370 aa8.8□□□□□ -1
YBX3-204ENST00000366290 PXMP2Q9NR77 195 aa8.8□□□□□ -1
YBX3-204ENST00000366290 LUC7L2Q9Y383 392 aaKnown RBP8.8□□□□□ -1
YBX3-204ENST00000366290 PCDHGA9Q9Y5G4 932 aaKnown RBP8.8□□□□□ -1
YBX3-204ENST00000366290 PCDHGA8Q9Y5G5 932 aa8.8□□□□□ -1
YBX3-204ENST00000366290 PCDHGA7Q9Y5G6 932 aa8.8□□□□□ -1
YBX3-204ENST00000366290 PCDHGA6Q9Y5G7 932 aa8.8□□□□□ -1
YBX3-204ENST00000366290 PCDHGA3Q9Y5H0 932 aa8.8□□□□□ -1
YBX3-204ENST00000366290 PCDHGA2Q9Y5H1 932 aa8.8□□□□□ -1
YBX3-204ENST00000366290 MRFAP1Q9Y605 127 aa8.8□□□□□ -1
YBX3-204ENST00000366290 MROH7Q68CQ1 1323 aa8.8□□□□□ -1
YBX3-204ENST00000366290 A0A0U1RQG5 324 aaPredicted RBP8.79□□□□□ -1
YBX3-204ENST00000366290 GCOM1H8Y6P7 765 aaPredicted RBP8.79□□□□□ -1
YBX3-204ENST00000366290 KIAA0355O15063 1070 aa8.79□□□□□ -1
YBX3-204ENST00000366290 PFKFB2O60825 505 aa8.79□□□□□ -1
YBX3-204ENST00000366290 MAFO75444 373 aaPredicted RBP8.79□□□□□ -1
YBX3-204ENST00000366290 EIF3JO75822 258 aaKnown RBP8.79□□□□□ -1
YBX3-204ENST00000366290 CYP7B1O75881 506 aa8.79□□□□□ -1
YBX3-204ENST00000366290 ABLIM3O94929 683 aa8.79□□□□□ -1
YBX3-204ENST00000366290 PCDH8O95206 1070 aa8.79□□□□□ -1
YBX3-204ENST00000366290 POLR2MP0CAP2 368 aa8.79□□□□□ -1
YBX3-204ENST00000366290 MED14OSP0DP75 135 aa8.79□□□□□ -1
YBX3-204ENST00000366290 RECQLP46063 649 aaPredicted RBP8.79□□□□□ -1
YBX3-204ENST00000366290 MTNR1BP49286 362 aa8.79□□□□□ -1
YBX3-204ENST00000366290 METAP2P50579 478 aaKnown RBP eCLIP8.79□□□□□ -13e-11■■■□□ 14.6
YBX3-204ENST00000366290 CCT2P78371 535 aaKnown RBP8.79□□□□□ -1
YBX3-204ENST00000366290 CD83Q01151 205 aa8.79□□□□□ -1
YBX3-204ENST00000366290 TLE2Q04725 743 aa8.79□□□□□ -1
YBX3-204ENST00000366290 SSPNQ14714 243 aa8.79□□□□□ -1
YBX3-204ENST00000366290 PPP2R5BQ15173 497 aa8.79□□□□□ -1
YBX3-204ENST00000366290 ANKRD1Q15327 319 aa8.79□□□□□ -1
YBX3-204ENST00000366290 STXBP2Q15833 593 aa8.79□□□□□ -1
YBX3-204ENST00000366290 WDR72Q3MJ13 1102 aa8.79□□□□□ -1
YBX3-204ENST00000366290 TMEM63BQ5T3F8 832 aa8.79□□□□□ -1
YBX3-204ENST00000366290 FAM109BQ6ICB4 259 aaPredicted RBP8.79□□□□□ -1
YBX3-204ENST00000366290 CXXC5Q7LFL8 322 aaKnown RBP8.79□□□□□ -1
YBX3-204ENST00000366290 KCNK18Q7Z418 384 aa8.79□□□□□ -1
YBX3-204ENST00000366290 FAM129CQ86XR2 697 aa8.79□□□□□ -1
YBX3-204ENST00000366290 FNIP1Q8TF40 1166 aa8.79□□□□□ -1
YBX3-204ENST00000366290 RRP36Q96EU6 259 aaKnown RBP8.79□□□□□ -1
YBX3-204ENST00000366290 GLT1D1Q96MS3 346 aa8.79□□□□□ -1
YBX3-204ENST00000366290 PITHD1Q9GZP4 211 aaPredicted RBP8.79□□□□□ -1
YBX3-204ENST00000366290 CDH19Q9H159 772 aa8.79□□□□□ -1
YBX3-204ENST00000366290 RBM28Q9NW13 759 aaKnown RBP8.79□□□□□ -1
YBX3-204ENST00000366290 KCMF1Q9P0J7 381 aa8.79□□□□□ -1
YBX3-204ENST00000366290 ATP11BQ9Y2G3 1177 aa8.79□□□□□ -1
YBX3-204ENST00000366290 MYH7BA7E2Y1 1941 aa8.78□□□□□ -1
YBX3-204ENST00000366290 KLHL33A6NCF5 533 aa8.78□□□□□ -1
YBX3-204ENST00000366290 TRIM43BA6NCK2 446 aa8.78□□□□□ -1
YBX3-204ENST00000366290 MEIS2O14770 477 aa8.78□□□□□ -1
YBX3-204ENST00000366290 TSPAN6O43657 245 aa8.78□□□□□ -1
YBX3-204ENST00000366290 OPHN1O60890 802 aa8.78□□□□□ -1
YBX3-204ENST00000366290 DTNBO60941 627 aa8.78□□□□□ -1
YBX3-204ENST00000366290 CTDNEP1O95476 244 aa8.78□□□□□ -1
YBX3-204ENST00000366290 SCGB1D2O95969 90 aa8.78□□□□□ -1
YBX3-204ENST00000366290 CLTBP09497 229 aa8.78□□□□□ -1
YBX3-204ENST00000366290 TGFB3P10600 412 aa8.78□□□□□ -1
YBX3-204ENST00000366290 CPT1AP50416 773 aa8.78□□□□□ -1
YBX3-204ENST00000366290 MRPS9P82933 396 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms