RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 PEX2P28328 305 aa4.99□□□□□ -1.61
RNU6-553P-201ENST00000364047 PRKAR1BP31321 381 aa4.99□□□□□ -1.61
RNU6-553P-201ENST00000364047 RPS16P62249 146 aaKnown RBP4.99□□□□□ -1.61
RNU6-553P-201ENST00000364047 HOXA4Q00056 320 aaPredicted RBP4.99□□□□□ -1.61
RNU6-553P-201ENST00000364047 E2F1Q01094 437 aa4.99□□□□□ -1.61
RNU6-553P-201ENST00000364047 FMO1Q01740 532 aa4.99□□□□□ -1.61
RNU6-553P-201ENST00000364047 CCNIQ14094 377 aa4.99□□□□□ -1.61
RNU6-553P-201ENST00000364047 CYP1B1Q16678 543 aa4.99□□□□□ -1.61
RNU6-553P-201ENST00000364047 PROSER3Q2NL68 480 aa4.99□□□□□ -1.61
RNU6-553P-201ENST00000364047 L1TD1Q5T7N2 865 aaKnown RBP4.99□□□□□ -1.61
RNU6-553P-201ENST00000364047 PRAMEF17Q5VTA0 474 aa4.99□□□□□ -1.61
RNU6-553P-201ENST00000364047 MTHFD1LQ6UB35 978 aa4.99□□□□□ -1.61
RNU6-553P-201ENST00000364047 TRIM72Q6ZMU5 477 aa4.99□□□□□ -1.61
RNU6-553P-201ENST00000364047 KCTD20Q7Z5Y7 419 aa4.99□□□□□ -1.61
RNU6-553P-201ENST00000364047 CYP2W1Q8TAV3 490 aa4.99□□□□□ -1.61
RNU6-553P-201ENST00000364047 APIPQ96GX9 242 aa4.99□□□□□ -1.61
RNU6-553P-201ENST00000364047 LENG8Q96PV6 779 aaPredicted RBP4.99□□□□□ -1.61
RNU6-553P-201ENST00000364047 KRTAP17-1Q9BYP8 105 aa4.99□□□□□ -1.61
RNU6-553P-201ENST00000364047 PRDM11Q9NQV5 511 aa4.99□□□□□ -1.61
RNU6-553P-201ENST00000364047 TNFRSF18Q9Y5U5 241 aa4.99□□□□□ -1.61
RNU6-553P-201ENST00000364047 TISP43B9A030 160 aa4.98□□□□□ -1.61
RNU6-553P-201ENST00000364047 AP4M1O00189 453 aa4.98□□□□□ -1.61
RNU6-553P-201ENST00000364047 PSMD9O00233 223 aa4.98□□□□□ -1.61
RNU6-553P-201ENST00000364047 PPM1GO15355 546 aaPredicted RBP4.98□□□□□ -1.61
RNU6-553P-201ENST00000364047 CCP110O43303 1012 aa4.98□□□□□ -1.61
RNU6-553P-201ENST00000364047 CELA2AP08217 269 aa4.98□□□□□ -1.61
RNU6-553P-201ENST00000364047 PTDSS1P48651 473 aaKnown RBP4.98□□□□□ -1.61
RNU6-553P-201ENST00000364047 ITGA8P53708 1063 aa4.98□□□□□ -1.61
RNU6-553P-201ENST00000364047 BCAT1P54687 386 aa4.98□□□□□ -1.61
RNU6-553P-201ENST00000364047 KIAA1614Q5VZ46 1190 aa4.98□□□□□ -1.61
RNU6-553P-201ENST00000364047 KIRREL2Q6UWL6 708 aa4.98□□□□□ -1.61
RNU6-553P-201ENST00000364047 RSPRY1Q96DX4 576 aa4.98□□□□□ -1.61
RNU6-553P-201ENST00000364047 DAZAP1Q96EP5 407 aaKnown RBP4.98□□□□□ -1.61
RNU6-553P-201ENST00000364047 PRR25Q96S07 402 aa4.98□□□□□ -1.61
RNU6-553P-201ENST00000364047 FLRT1Q9NZU1 646 aa4.98□□□□□ -1.61
RNU6-553P-201ENST00000364047 COL20A1Q9P218 1284 aa4.98□□□□□ -1.61
RNU6-553P-201ENST00000364047 DNMT3BQ9UBC3 853 aaKnown RBP4.98□□□□□ -1.61
RNU6-553P-201ENST00000364047 RRP9O43818 475 aaKnown RBP4.97□□□□□ -1.61
RNU6-553P-201ENST00000364047 EXOC3O60645 756 aa4.97□□□□□ -1.61
RNU6-553P-201ENST00000364047 RHCEP18577 417 aa4.97□□□□□ -1.61
RNU6-553P-201ENST00000364047 FPR3P25089 353 aa4.97□□□□□ -1.61
RNU6-553P-201ENST00000364047 MTHFSP49914 203 aa4.97□□□□□ -1.61
RNU6-553P-201ENST00000364047 TUBA4AP68366 448 aa4.97□□□□□ -1.61
RNU6-553P-201ENST00000364047 RHDQ02161 417 aa4.97□□□□□ -1.61
RNU6-553P-201ENST00000364047 EZH2Q15910 746 aaKnown RBP4.97□□□□□ -1.61
RNU6-553P-201ENST00000364047 SRSF7Q16629 238 aaKnown RBP eCLIP4.97□□□□□ -1.61
RNU6-553P-201ENST00000364047 ZNF66Q6ZN08 573 aa4.97□□□□□ -1.61
RNU6-553P-201ENST00000364047 SESTD1Q86VW0 696 aa4.97□□□□□ -1.61
RNU6-553P-201ENST00000364047 FMNL3Q8IVF7 1028 aa4.97□□□□□ -1.61
RNU6-553P-201ENST00000364047 SIRT6Q8N6T7 355 aa4.97□□□□□ -1.61
RNU6-553P-201ENST00000364047 VGLL2Q8N8G2 317 aa4.97□□□□□ -1.61
RNU6-553P-201ENST00000364047 PNLDC1Q8NA58 520 aaKnown RBP4.97□□□□□ -1.61
RNU6-553P-201ENST00000364047 SMCR8Q8TEV9 937 aaPredicted RBP4.97□□□□□ -1.61
RNU6-553P-201ENST00000364047 THAP7Q9BT49 309 aaPredicted RBP4.97□□□□□ -1.61
RNU6-553P-201ENST00000364047 TRIM5Q9C035 493 aa4.97□□□□□ -1.61
RNU6-553P-201ENST00000364047 CIPCQ9C0C6 399 aa4.97□□□□□ -1.61
RNU6-553P-201ENST00000364047 METTL14Q9HCE5 456 aaKnown RBP4.97□□□□□ -1.61
RNU6-553P-201ENST00000364047 ITGB1BP2Q9UKP3 347 aa4.97□□□□□ -1.61
RNU6-553P-201ENST00000364047 USP22Q9UPT9 525 aa4.97□□□□□ -1.61
RNU6-553P-201ENST00000364047 DRG1Q9Y295 367 aaKnown RBP4.97□□□□□ -1.61
RNU6-553P-201ENST00000364047 PCDHGB6Q9Y5F9 930 aa4.97□□□□□ -1.61
RNU6-553P-201ENST00000364047 DNAJC9-AS1A6NH13 148 aa4.96□□□□□ -1.62
RNU6-553P-201ENST00000364047 RAB27BO00194 218 aa4.96□□□□□ -1.62
RNU6-553P-201ENST00000364047 CD3EAPO15446 510 aaKnown RBP4.96□□□□□ -1.62
RNU6-553P-201ENST00000364047 PIAS2O75928 621 aa4.96□□□□□ -1.62
RNU6-553P-201ENST00000364047 TXNP10599 105 aaKnown RBP4.96□□□□□ -1.62
RNU6-553P-201ENST00000364047 IL1R1P14778 569 aa4.96□□□□□ -1.62
RNU6-553P-201ENST00000364047 ACVR2AP27037 513 aa4.96□□□□□ -1.62
RNU6-553P-201ENST00000364047 EPHA3P29320 983 aa4.96□□□□□ -1.62
RNU6-553P-201ENST00000364047 UQCRC1P31930 480 aa4.96□□□□□ -1.62
RNU6-553P-201ENST00000364047 GKP32189 559 aa4.96□□□□□ -1.62
RNU6-553P-201ENST00000364047 ARHGEF7Q14155 803 aa4.96□□□□□ -1.62
RNU6-553P-201ENST00000364047 GALEQ14376 348 aa4.96□□□□□ -1.62
RNU6-553P-201ENST00000364047 SLC29A2Q14542 456 aa4.96□□□□□ -1.62
RNU6-553P-201ENST00000364047 NPY5RQ15761 445 aa4.96□□□□□ -1.62
RNU6-553P-201ENST00000364047 FCRL6Q6DN72 434 aa4.96□□□□□ -1.62
RNU6-553P-201ENST00000364047 YAF2Q8IY57 180 aa4.96□□□□□ -1.62
RNU6-553P-201ENST00000364047 TERB1Q8NA31 727 aa4.96□□□□□ -1.62
RNU6-553P-201ENST00000364047 SNX18Q96RF0 628 aa4.96□□□□□ -1.62
RNU6-553P-201ENST00000364047 DHX36Q9H2U1 1008 aaKnown RBP4.96□□□□□ -1.62
RNU6-553P-201ENST00000364047 MID2Q9UJV3 735 aa4.96□□□□□ -1.62
RNU6-553P-201ENST00000364047 AMFRQ9UKV5 643 aa4.96□□□□□ -1.62
RNU6-553P-201ENST00000364047 PRRT4C9JH25 899 aa4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 H7C1Q1 480 aa4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 CES2O00748 559 aa4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 PMPCBO75439 489 aa4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 LATS1O95835 1130 aa4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 CYP2D6P10635 497 aa4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 MYCLP12524 364 aaPredicted RBP4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 HGFP14210 728 aa4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 EPHB2P29323 1055 aa4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 CPT1AP50416 773 aa4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 RENBPP51606 427 aa4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 SUMO2P61956 95 aaKnown RBP4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 STK3Q13188 491 aa4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 SEMA5AQ13591 1074 aa4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 ZNF750Q32MQ0 723 aa4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 SERPINA13PQ6UXR4 307 aa4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 UNC13DQ70J99 1090 aa4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 CHSY1Q86X52 802 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms