RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 TOPORSQ9NS56 1045 aaPredicted RBP14.45□□□□□ -0.1
SMC5-201ENST00000361138 DLGAP3O95886 979 aa14.45□□□□□ -0.1
SMC5-201ENST00000361138 PDK3Q15120 406 aa14.45□□□□□ -0.1
SMC5-201ENST00000361138 CBWD6Q4V339 395 aa14.45□□□□□ -0.1
SMC5-201ENST00000361138 CBWD3Q5JTY5 395 aa14.45□□□□□ -0.1
SMC5-201ENST00000361138 CBWD5Q5RIA9 395 aa14.45□□□□□ -0.1
SMC5-201ENST00000361138 ETNPPLQ8TBG4 499 aa14.45□□□□□ -0.1
SMC5-201ENST00000361138 TAS1R2Q8TE23 839 aa14.45□□□□□ -0.1
SMC5-201ENST00000361138 WDR60Q8WVS4 1066 aa14.45□□□□□ -0.1
SMC5-201ENST00000361138 UBXN6Q9BZV1 441 aa14.45□□□□□ -0.1
SMC5-201ENST00000361138 SCN3BQ9NY72 215 aa14.45□□□□□ -0.1
SMC5-201ENST00000361138 DNPEPQ9ULA0 475 aa14.45□□□□□ -0.1
SMC5-201ENST00000361138 CYP24A1Q07973 514 aa14.45□□□□□ -0.1
SMC5-201ENST00000361138 BLMHQ13867 455 aa14.45□□□□□ -0.1
SMC5-201ENST00000361138 ZBTB49Q6ZSB9 765 aa14.45□□□□□ -0.1
SMC5-201ENST00000361138 CATSPER4Q7RTX7 472 aa14.45□□□□□ -0.1
SMC5-201ENST00000361138 NOP9Q86U38 636 aaKnown RBP14.45□□□□□ -0.1
SMC5-201ENST00000361138 TBC1D16Q8TBP0 767 aa14.45□□□□□ -0.1
SMC5-201ENST00000361138 ARHGEF1Q92888 912 aaKnown RBP14.45□□□□□ -0.1
SMC5-201ENST00000361138 FAM162AQ96A26 154 aa14.45□□□□□ -0.1
SMC5-201ENST00000361138 LRRC19Q9H756 370 aa14.45□□□□□ -0.1
SMC5-201ENST00000361138 MYRFQ9Y2G1 1151 aa14.45□□□□□ -0.1
SMC5-201ENST00000361138 SDR42E2A6NKP2 422 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 DCDC2CA8MYV0 355 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 CPA3P15088 417 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 CDH2P19022 906 aaPredicted RBP14.44□□□□□ -0.1
SMC5-201ENST00000361138 FECHP22830 423 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 V9GYQ6 96 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 UBA6A0AVT1 1052 aaPredicted RBP14.44□□□□□ -0.1
SMC5-201ENST00000361138 E5RI56 91 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 SERPINE1P05121 402 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 AVPR1AP37288 418 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 EIF2B2P49770 351 aaKnown RBP14.44□□□□□ -0.1
SMC5-201ENST00000361138 FAAP100Q0VG06 881 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 CCDC60Q8IWA6 550 aaPredicted RBP14.44□□□□□ -0.1
SMC5-201ENST00000361138 FAR2Q96K12 515 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 AGAP1Q9UPQ3 857 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 CYP1A2P05177 515 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 OCM2P0CE71 109 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 OCMP0CE72 109 aaPredicted RBP14.44□□□□□ -0.1
SMC5-201ENST00000361138 PRKCEQ02156 737 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 N4BP2L1Q5TBK1 243 aaPredicted RBP14.44□□□□□ -0.1
SMC5-201ENST00000361138 RIPOR1Q6ZS17 1223 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 KDELC2Q7Z4H8 507 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 POU5F2Q8N7G0 328 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 ZNF518BQ9C0D4 1074 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 PAIP1Q9H074 479 aaKnown RBP14.44□□□□□ -0.1
SMC5-201ENST00000361138 C17orf75Q9HAS0 396 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 ATXN10Q9UBB4 475 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 RUVBL2Q9Y230 463 aaKnown RBP14.44□□□□□ -0.1
SMC5-201ENST00000361138 GCLCP48506 637 aaPredicted RBP14.44□□□□□ -0.1
SMC5-201ENST00000361138 GSCP56915 257 aaPredicted RBP14.44□□□□□ -0.1
SMC5-201ENST00000361138 PDK2Q15119 407 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 GOLGA7BQ2TAP0 167 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 ZNF572Q7Z3I7 529 aaPredicted RBP14.44□□□□□ -0.1
SMC5-201ENST00000361138 DIS3LQ8TF46 1054 aaKnown RBP14.44□□□□□ -0.1
SMC5-201ENST00000361138 ULK4Q96C45 1275 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 FAM193BQ96PV7 902 aaPredicted RBP14.44□□□□□ -0.1
SMC5-201ENST00000361138 DPPA5A6NC42 116 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 SLCO1B7G3V0H7 640 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 TPST1O60507 370 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 MLH1P40692 756 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 ALDH1A3P47895 512 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 CCNA1P78396 465 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 C1QBPQ07021 282 aaKnown RBP14.44□□□□□ -0.1
SMC5-201ENST00000361138 MRPL28Q13084 256 aaKnown RBP14.44□□□□□ -0.1
SMC5-201ENST00000361138 KCTD19Q17RG1 926 aaPredicted RBP14.44□□□□□ -0.1
SMC5-201ENST00000361138 SNX19Q92543 992 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 EPAS1Q99814 870 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 C17orf80Q9BSJ5 609 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 NEUROG2Q9H2A3 272 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 DAPK2Q9UIK4 370 aa14.44□□□□□ -0.1
SMC5-201ENST00000361138 FAM237BA0A1B0GVD1 139 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 KBTBD13C9JR72 458 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 SMNDC1O75940 238 aaKnown RBP eCLIP14.43□□□□□ -0.1
SMC5-201ENST00000361138 LSM8O95777 96 aaKnown RBP14.43□□□□□ -0.1
SMC5-201ENST00000361138 VCAM1P19320 739 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 DHDDSQ86SQ9 333 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 CCDC103Q8IW40 242 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 SP8Q8IXZ3 490 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 BRD8Q9H0E9 1235 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 SARS2Q9NP81 518 aaKnown RBP14.43□□□□□ -0.1
SMC5-201ENST00000361138 ATRNO75882 1429 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 ZNF839A8K0R7 811 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 TBC1D12O60347 775 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 IL18RAPO95256 599 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 C21orf59P57076 290 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 BOLA3Q53S33 107 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 KCNV1Q6PIU1 500 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 IRF2BP2Q7Z5L9 587 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 KATNAL2Q8IYT4 538 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 RFWD2Q8NHY2 731 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 SP110Q9HB58 689 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 GPRC5CQ9NQ84 441 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 KNDC1Q76NI1 1749 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 MEGF6O75095 1541 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 CLVS1Q8IUQ0 354 aaPredicted RBP14.43□□□□□ -0.1
SMC5-201ENST00000361138 AVENQ9NQS1 362 aaPredicted RBP14.43□□□□□ -0.1
SMC5-201ENST00000361138 WNT7AO00755 349 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 MAPTP10636 758 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms