RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 EXTL3O43909 919 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 HK2P52789 917 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 WDR72Q3MJ13 1102 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 EPB41L4BQ9H329 900 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 ING4Q9UNL4 249 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 PHGDHO43175 533 aaKnown RBP9.6□□□□□ -0.87
VPS13A-203ENST00000360280 GPC1P35052 558 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 NAB2Q15742 525 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 UGT2B28Q9BY64 529 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 SYNDIG1Q9H7V2 258 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 PLEKHG2Q9H7P9 1386 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 CD2BP2O95400 341 aaKnown RBP9.6□□□□□ -0.87
VPS13A-203ENST00000360280 MSH3P20585 1137 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 ITGA8P53708 1063 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 ADARP55265 1226 aaKnown RBP9.6□□□□□ -0.87
VPS13A-203ENST00000360280 TSHZ1Q6ZSZ6 1077 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 COL23A1Q86Y22 540 aaPredicted RBP9.6□□□□□ -0.87
VPS13A-203ENST00000360280 JAMLQ86YT9 394 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 CENPIQ92674 756 aaPredicted RBP9.6□□□□□ -0.87
VPS13A-203ENST00000360280 PAIP1Q9H074 479 aaKnown RBP9.6□□□□□ -0.87
VPS13A-203ENST00000360280 PNMA8BQ9ULN7 279 aaPredicted RBP9.6□□□□□ -0.87
VPS13A-203ENST00000360280 CDC40O60508 579 aaKnown RBP eCLIP9.6□□□□□ -0.873e-6■■■■□ 23
VPS13A-203ENST00000360280 GPR162Q16538 588 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 MIER2Q8N344 545 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 OR6Y1Q8NGX8 325 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 S100ZQ8WXG8 99 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 AP3S1Q92572 193 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.6□□□□□ -0.87
VPS13A-203ENST00000360280 TFE3P19532 575 aaPredicted RBP9.6□□□□□ -0.87
VPS13A-203ENST00000360280 HARS2P49590 506 aaKnown RBP9.6□□□□□ -0.87
VPS13A-203ENST00000360280 AKIRIN2Q53H80 203 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 B3GNT6Q6ZMB0 384 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 TMEM26Q6ZUK4 368 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 NPR3P17342 541 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 CCDC24Q8N4L8 307 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 DSN1Q9H410 356 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 NCKIPSDQ9NZQ3 722 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 DUSP12Q9UNI6 340 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 MICAL3Q7RTP6 2002 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 ATP6V1G2O95670 118 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 DYNLL1P63167 89 aaKnown RBP9.6□□□□□ -0.87
VPS13A-203ENST00000360280 PPIDQ08752 370 aaKnown RBP9.6□□□□□ -0.87
VPS13A-203ENST00000360280 FAM111AQ96PZ2 611 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 PTGER2P43116 358 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 TRIM32Q13049 653 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 UTP15Q8TED0 518 aaKnown RBP9.6□□□□□ -0.87
VPS13A-203ENST00000360280 ACAD9Q9H845 621 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 BARHL2Q9NY43 387 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 SIK3Q9Y2K2 1263 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 VPS26AO75436 327 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 IL18RAPO95256 599 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 PJA1Q8NG27 643 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 EHD3Q9NZN3 535 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 SKAP2O75563 359 aaPredicted RBP9.59□□□□□ -0.87
VPS13A-203ENST00000360280 MZF1P28698 734 aaPredicted RBP9.59□□□□□ -0.87
VPS13A-203ENST00000360280 FMO5P49326 533 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 OLFML1Q6UWY5 402 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 PUS7LQ9H0K6 701 aaKnown RBP9.59□□□□□ -0.87
VPS13A-203ENST00000360280 ANTXR1Q9H6X2 564 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 PCDHGA4Q9Y5G9 962 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 PTPRTO14522 1441 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 ANKARQ7Z5J8 1434 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 RAD51CO43502 376 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 AHCYL1O43865 530 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 ATG7O95352 703 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 GRK4P32298 578 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 ITGA9Q13797 1035 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 NFYCQ13952 458 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 CCNI2Q6ZMN8 369 aaPredicted RBP9.59□□□□□ -0.87
VPS13A-203ENST00000360280 MYCBPAPQ8TBZ2 947 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 FNIP1Q8TF40 1166 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 ENTPD7Q9NQZ7 604 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 CRLS1Q9UJA2 301 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 BBOX1O75936 387 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 USP11P51784 963 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 SCARA3Q6AZY7 606 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 ULK3Q6PHR2 472 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 SYTL1Q8IYJ3 562 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 IPMKQ8NFU5 416 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 USP33Q8TEY7 942 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 C9orf72Q96LT7 481 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 PGM3O95394 542 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 FOSL2P15408 326 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 CCNA2P20248 432 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 ACADLP28330 430 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 PTPN4P29074 926 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 CPA2P48052 419 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 TGM3Q08188 693 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 SMCO1Q147U7 214 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 LRRC74BQ6ZQY2 392 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 C11orf96Q7Z7L8 435 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 STARD8Q92502 1023 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 KCTD10Q9H3F6 313 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 WHRNQ9P202 907 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 GNG14A0A1W2PPG7 69 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 CHP2O43745 196 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 SLC2A3P11169 496 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 ATP2C1P98194 919 aaPredicted RBP9.59□□□□□ -0.87
VPS13A-203ENST00000360280 CAMK2GQ13555 558 aaPredicted RBP9.59□□□□□ -0.87
VPS13A-203ENST00000360280 TMEM132DQ14C87 1099 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms