RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 PANX3Q96QZ0 392 aa9.72□□□□□ -0.85
SMARCAL1-202ENST00000358207 MRPL1Q9BYD6 325 aaKnown RBP9.72□□□□□ -0.85
SMARCAL1-202ENST00000358207 OSBPL6Q9BZF3 934 aa9.72□□□□□ -0.85
SMARCAL1-202ENST00000358207 RAVER2Q9HCJ3 691 aaKnown RBP9.72□□□□□ -0.85
SMARCAL1-202ENST00000358207 XAB2Q9HCS7 855 aaKnown RBP9.72□□□□□ -0.85
SMARCAL1-202ENST00000358207 RRN3Q9NYV6 651 aa9.72□□□□□ -0.85
SMARCAL1-202ENST00000358207 POU2F3Q9UKI9 436 aa9.72□□□□□ -0.85
SMARCAL1-202ENST00000358207 GPSM3Q9Y4H4 160 aa9.72□□□□□ -0.85
SMARCAL1-202ENST00000358207 AK5Q9Y6K8 562 aa9.72□□□□□ -0.85
SMARCAL1-202ENST00000358207 PLIN4Q96Q06 1357 aa9.72□□□□□ -0.85
SMARCAL1-202ENST00000358207 KIAA0391O15091 583 aaKnown RBP9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 ALAS1P13196 640 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 CCL5P13501 91 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 DDX5P17844 614 aaKnown RBP9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 NDUFA5Q16718 116 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 ANKRD20A4Q4UJ75 823 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 PRR16Q569H4 304 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 DTHD1Q6ZMT9 781 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 CCDC81Q6ZN84 652 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 NEK8Q86SG6 692 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 FBXO11Q86XK2 927 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 ERI1Q8IV48 349 aaKnown RBP9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 VPS52Q8N1B4 723 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 RASGEF1CQ8N431 466 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 PPP1R14CQ8TAE6 165 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 LRRC15Q8TF66 581 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 NUDT12Q9BQG2 462 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 MKNK1Q9BUB5 465 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 ZMAT5Q9UDW3 170 aaKnown RBP9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 KLHL3Q9UH77 587 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 LCTP09848 1927 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 A8MXQ7 604 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 DDX39AO00148 427 aaKnown RBP9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 CHMP2AO43633 222 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 SGPL1O95470 568 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 COL6A1P12109 1028 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 PLCB3Q01970 1234 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 CACNB1Q02641 598 aaPredicted RBP9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 TDRD12Q587J7 1177 aaKnown RBP9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 HSP90AA5PQ58FG0 334 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 SLC45A4Q5BKX6 768 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 SPDYAQ5MJ70 313 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 FYB2Q5VWT5 728 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 PDXDC1Q6P996 788 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 TTC30BQ8N4P2 665 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 CSGALNACT2Q8N6G5 542 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 LRRC57Q8N9N7 239 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 SHKBP1Q8TBC3 707 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 GIMAP1Q8WWP7 306 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 FBXL18Q96ME1 805 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 ARHGAP39Q9C0H5 1083 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 MMRN2Q9H8L6 949 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 ERVK-5Q9HDB9 667 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 UBN1Q9NPG3 1134 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 GIN1Q9NXP7 522 aa9.71□□□□□ -0.85
SMARCAL1-202ENST00000358207 A0A087X0T9 212 aa9.71□□□□□ -0.86
SMARCAL1-202ENST00000358207 SSU72P8A0A1W2PR75 194 aa9.71□□□□□ -0.86
SMARCAL1-202ENST00000358207 ARHGAP10A1A4S6 786 aa9.71□□□□□ -0.86
SMARCAL1-202ENST00000358207 EDIL3O43854 480 aa9.71□□□□□ -0.86
SMARCAL1-202ENST00000358207 TBCAO75347 108 aaKnown RBP9.71□□□□□ -0.86
SMARCAL1-202ENST00000358207 HMGCRP04035 888 aa9.71□□□□□ -0.86
SMARCAL1-202ENST00000358207 S100BP04271 92 aaPredicted RBP9.71□□□□□ -0.86
SMARCAL1-202ENST00000358207 C6orf222P0C671 652 aaPredicted RBP9.71□□□□□ -0.86
SMARCAL1-202ENST00000358207 FAM228BP0C875 321 aa9.71□□□□□ -0.86
SMARCAL1-202ENST00000358207 MAPK4P31152 587 aa9.71□□□□□ -0.86
SMARCAL1-202ENST00000358207 MNX1P50219 401 aaPredicted RBP9.71□□□□□ -0.86
SMARCAL1-202ENST00000358207 BACE1P56817 501 aa9.71□□□□□ -0.86
SMARCAL1-202ENST00000358207 ATP2C1P98194 919 aaPredicted RBP9.71□□□□□ -0.86
SMARCAL1-202ENST00000358207 ATP1A4Q13733 1029 aa9.71□□□□□ -0.86
SMARCAL1-202ENST00000358207 MMEL1Q495T6 779 aa9.71□□□□□ -0.86
SMARCAL1-202ENST00000358207 RIPOR1Q6ZS17 1223 aa9.71□□□□□ -0.86
SMARCAL1-202ENST00000358207 LRRC6Q86X45 466 aa9.71□□□□□ -0.86
SMARCAL1-202ENST00000358207 CPSF7Q8N684 471 aaKnown RBP9.71□□□□□ -0.86
SMARCAL1-202ENST00000358207 FBXO27Q8NI29 283 aa9.71□□□□□ -0.86
SMARCAL1-202ENST00000358207 CLPTM1LQ96KA5 538 aa9.71□□□□□ -0.86
SMARCAL1-202ENST00000358207 FAM161BQ96MY7 647 aa9.71□□□□□ -0.86
SMARCAL1-202ENST00000358207 NCKIPSDQ9NZQ3 722 aa9.71□□□□□ -0.86
SMARCAL1-202ENST00000358207 GRID1Q9ULK0 1009 aa9.71□□□□□ -0.86
SMARCAL1-202ENST00000358207 M0R2N6 131 aa9.7□□□□□ -0.86
SMARCAL1-202ENST00000358207 TXNDC9O14530 226 aa9.7□□□□□ -0.86
SMARCAL1-202ENST00000358207 PFDN6O15212 129 aa9.7□□□□□ -0.86
SMARCAL1-202ENST00000358207 KMOO15229 486 aa9.7□□□□□ -0.86
SMARCAL1-202ENST00000358207 MAGEB2O15479 319 aa9.7□□□□□ -0.86
SMARCAL1-202ENST00000358207 TMCC2O75069 709 aa9.7□□□□□ -0.86
SMARCAL1-202ENST00000358207 CYP1A2P05177 515 aa9.7□□□□□ -0.86
SMARCAL1-202ENST00000358207 CD48P09326 243 aa9.7□□□□□ -0.86
SMARCAL1-202ENST00000358207 RBP3P10745 1247 aa9.7□□□□□ -0.86
SMARCAL1-202ENST00000358207 TSPY1Q01534 308 aa9.7□□□□□ -0.86
SMARCAL1-202ENST00000358207 TLR1Q15399 786 aa9.7□□□□□ -0.86
SMARCAL1-202ENST00000358207 BORAQ6PGQ7 559 aa9.7□□□□□ -0.86
SMARCAL1-202ENST00000358207 ADAT2Q7Z6V5 191 aaKnown RBP9.7□□□□□ -0.86
SMARCAL1-202ENST00000358207 CROCCP2Q86T23 111 aa9.7□□□□□ -0.86
SMARCAL1-202ENST00000358207 CPNE9Q8IYJ1 553 aa9.7□□□□□ -0.86
SMARCAL1-202ENST00000358207 ABRAQ8N0Z2 381 aa9.7□□□□□ -0.86
SMARCAL1-202ENST00000358207 DCLK2Q8N568 766 aa9.7□□□□□ -0.86
SMARCAL1-202ENST00000358207 EXD1Q8NHP7 514 aa9.7□□□□□ -0.86
SMARCAL1-202ENST00000358207 SH2D3AQ9BRG2 576 aa9.7□□□□□ -0.86
SMARCAL1-202ENST00000358207 CYLDQ9NQC7 956 aa9.7□□□□□ -0.86
SMARCAL1-202ENST00000358207 GID8Q9NWU2 228 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms