RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 RINLQ6ZS11 566 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 FAM83AQ86UY5 434 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 MAP4K3Q8IVH8 894 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 GSTCDQ8NEC7 633 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 PDCD2LQ9BRP1 358 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 SENP1Q9P0U3 644 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 NOCTQ9UK39 431 aaKnown RBP10.4□□□□□ -0.74
RNF40-202ENST00000357890 GIPC1O14908 333 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 LYPLA2O95372 231 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 NR3C2P08235 984 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 ETS1P14921 441 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 SSTR1P30872 391 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 GPC3P51654 580 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 ARL4CP56559 192 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 CYP24A1Q07973 514 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 LGSNQ5TDP6 509 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 B3GNT6Q6ZMB0 384 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 RDM1Q8NG50 284 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 OR6Y1Q8NGX8 325 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 LMO3Q8TAP4 145 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 NSUN6Q8TEA1 469 aaKnown RBP10.4□□□□□ -0.74
RNF40-202ENST00000357890 NLRP7Q8WX94 980 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 WWP1Q9H0M0 922 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 DNPEPQ9ULA0 475 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 APOBEC2Q9Y235 224 aaKnown RBP10.4□□□□□ -0.74
RNF40-202ENST00000357890 MYH4Q9Y623 1939 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 IQANK1A0A1B0GTG1 560 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 E2F8A0AVK6 867 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 H7C0C1 242 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 TBC1D12O60347 775 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 ZBTB7AO95365 584 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 TMEM191BP0C7N4 346 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 FDX1P10109 184 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 ATP5OP48047 213 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 AQP5P55064 265 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 SLC25A3Q00325 362 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 SFSWAPQ12872 951 aaKnown RBP10.4□□□□□ -0.74
RNF40-202ENST00000357890 SPP2Q13103 211 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 PTK6Q13882 451 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 PDK3Q15120 406 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 PGM5Q15124 567 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 OASLQ15646 514 aaKnown RBP10.4□□□□□ -0.74
RNF40-202ENST00000357890 DNAL1Q4LDG9 190 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 FKBP1CQ5VVH2 108 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 ASRGL1Q7L266 308 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 ZNF677Q86XU0 584 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 KCTD6Q8NC69 237 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 TMEM35BQ8NCS4 154 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 HSPH1Q92598 858 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 ZNF668Q96K58 619 aaPredicted RBP10.4□□□□□ -0.74
RNF40-202ENST00000357890 EPB41L4BQ9H329 900 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 RPAP3Q9H6T3 665 aaPredicted RBP10.4□□□□□ -0.74
RNF40-202ENST00000357890 AS3MTQ9HBK9 375 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 IL1RAPL1Q9NZN1 696 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 STX18Q9P2W9 335 aaKnown RBP10.4□□□□□ -0.74
RNF40-202ENST00000357890 YDJCA8MPS7 323 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 KCNT1Q5JUK3 1230 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 SLFN12LQ6IEE8 588 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 TRIM72Q6ZMU5 477 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 TMEM161BQ8NDZ6 487 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 ST6GALNAC4Q9H4F1 302 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 PRM3Q9NNZ6 103 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 COL20A1Q9P218 1284 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 ZNRF3Q9ULT6 936 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 TMA7Q9Y2S6 64 aaKnown RBP10.39□□□□□ -0.75
RNF40-202ENST00000357890 ASTN2O75129 1339 aaPredicted RBP10.39□□□□□ -0.75
RNF40-202ENST00000357890 MAGEB3O15480 346 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 XPOTO43592 962 aaKnown RBP10.39□□□□□ -0.75
RNF40-202ENST00000357890 ZC3H11AO75152 810 aaKnown RBP eCLIP10.39□□□□□ -0.75
RNF40-202ENST00000357890 PMLP29590 882 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 POLR2BP30876 1174 aaKnown RBP10.39□□□□□ -0.75
RNF40-202ENST00000357890 RGS2P41220 211 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 NCKAP1LP55160 1127 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 TSPY1Q01534 308 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 OCRLQ01968 901 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 GCNT1Q02742 428 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 PDK4Q16654 411 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 TRMT5Q32P41 509 aaKnown RBP10.39□□□□□ -0.75
RNF40-202ENST00000357890 ATG16L1Q676U5 607 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 TRIM50Q86XT4 487 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 WDR75Q8IWA0 830 aaKnown RBP10.39□□□□□ -0.75
RNF40-202ENST00000357890 RCOR2Q8IZ40 523 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 SAMD3Q8N6K7 520 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 FEZF2Q8TBJ5 459 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 OXNAD1Q96HP4 312 aaPredicted RBP10.39□□□□□ -0.75
RNF40-202ENST00000357890 SYT11Q9BT88 431 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 C10orf88Q9H8K7 445 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 SAR1AQ9NR31 198 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 BRWD3Q6RI45 1802 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 SMAPO00193 183 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 MAFGO15525 162 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 DGKIO75912 1065 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 MTA2O94776 668 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 GARTP22102 1010 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 PTGER2P43116 358 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 PCYT1AP49585 367 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 PRKG1Q13976 671 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 CHI3L2Q15782 390 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 UGCGQ16739 394 aa10.39□□□□□ -0.75
RNF40-202ENST00000357890 DCAF15Q66K64 600 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms