RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 IQCEQ6IPM2 695 aa4.22□□□□□ -1.73
CNOT4-202ENST00000356162 OTOP3Q7RTS5 596 aa4.22□□□□□ -1.73
CNOT4-202ENST00000356162 TMC8Q8IU68 726 aa4.22□□□□□ -1.73
CNOT4-202ENST00000356162 ZDHHC14Q8IZN3 488 aa4.22□□□□□ -1.73
CNOT4-202ENST00000356162 CRYBG2Q8N1P7 616 aa4.22□□□□□ -1.73
CNOT4-202ENST00000356162 TTC9BQ8N6N2 239 aa4.22□□□□□ -1.73
CNOT4-202ENST00000356162 ZSCAN1Q8NBB4 408 aa4.22□□□□□ -1.73
CNOT4-202ENST00000356162 ATAD1Q8NBU5 361 aa4.22□□□□□ -1.73
CNOT4-202ENST00000356162 LMO3Q8TAP4 145 aa4.22□□□□□ -1.73
CNOT4-202ENST00000356162 SMARCD1Q96GM5 515 aa4.22□□□□□ -1.73
CNOT4-202ENST00000356162 POM121Q96HA1 1249 aa4.22□□□□□ -1.73
CNOT4-202ENST00000356162 C8orf48Q96LL4 319 aa4.22□□□□□ -1.73
CNOT4-202ENST00000356162 UHRF1Q96T88 793 aaPredicted RBP4.22□□□□□ -1.73
CNOT4-202ENST00000356162 SEPT5Q99719 369 aaPredicted RBP4.22□□□□□ -1.73
CNOT4-202ENST00000356162 TUBGCP2Q9BSJ2 902 aa4.22□□□□□ -1.73
CNOT4-202ENST00000356162 NT5C1AQ9BXI3 368 aa4.22□□□□□ -1.73
CNOT4-202ENST00000356162 CRISPLD1Q9H336 500 aa4.22□□□□□ -1.73
CNOT4-202ENST00000356162 DPEP3Q9H4B8 488 aa4.22□□□□□ -1.73
CNOT4-202ENST00000356162 ASAH2Q9NR71 780 aa4.22□□□□□ -1.73
CNOT4-202ENST00000356162 EPS15L1Q9UBC2 864 aa4.22□□□□□ -1.73
CNOT4-202ENST00000356162 HMGXB4Q9UGU5 601 aa4.22□□□□□ -1.73
CNOT4-202ENST00000356162 ZFP37Q9Y6Q3 630 aaPredicted RBP4.22□□□□□ -1.73
CNOT4-202ENST00000356162 BRWD1Q9NSI6 2320 aa4.22□□□□□ -1.73
CNOT4-202ENST00000356162 DOCK8Q8NF50 2099 aa4.22□□□□□ -1.73
CNOT4-202ENST00000356162 TCF20Q9UGU0 1960 aaKnown RBP4.22□□□□□ -1.73
CNOT4-202ENST00000356162 SYCE3A1L190 88 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 MYBPHLA2RUH7 354 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 ZNF197O14709 1029 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 RHOP08100 348 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 PDGFRBP09619 1106 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 CSH1P0DML2 217 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 CSH2P0DML3 217 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 ZNF18P17022 549 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 PTPN2P17706 415 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 ATF6P18850 670 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 ANXA13P27216 316 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 CDC25CP30307 473 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 RNF144AP50876 292 aaPredicted RBP4.21□□□□□ -1.73
CNOT4-202ENST00000356162 CDH8P55286 799 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 TPM4P67936 248 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 KRT31Q15323 416 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 EXOC3L4Q17RC7 722 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 CCDC142Q17RM4 750 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 MIIPQ5JXC2 388 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 ARHGAP17Q68EM7 881 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 TRIM65Q6PJ69 517 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 PDZD4Q76G19 769 aaPredicted RBP4.21□□□□□ -1.73
CNOT4-202ENST00000356162 GET4Q7L5D6 327 aaPredicted RBP4.21□□□□□ -1.73
CNOT4-202ENST00000356162 ARHGEF19Q8IW93 802 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 FAM200AQ8TCP9 573 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 WHAMMQ8TF30 809 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 NANOS1Q8WY41 292 aaKnown RBP4.21□□□□□ -1.73
CNOT4-202ENST00000356162 PSMG2Q969U7 264 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 JAKMIP2Q96AA8 810 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 ELMO3Q96BJ8 720 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 ACSF2Q96CM8 615 aaPredicted RBP4.21□□□□□ -1.73
CNOT4-202ENST00000356162 TRMT2BQ96GJ1 504 aaKnown RBP4.21□□□□□ -1.73
CNOT4-202ENST00000356162 PCED1BQ96HM7 432 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 SPATA17Q96L03 361 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 ZNF512Q96ME7 567 aaPredicted RBP4.21□□□□□ -1.73
CNOT4-202ENST00000356162 GCNAQ96QF7 691 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 TWNKQ96RR1 684 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 MED10Q9BTT4 135 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 B3GNT5Q9BYG0 378 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 NDST4Q9H3R1 872 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 PRM3Q9NNZ6 103 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 KRT82Q9NSB4 513 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 CISHQ9NSE2 258 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 SAMSN1Q9NSI8 373 aaKnown RBP4.21□□□□□ -1.73
CNOT4-202ENST00000356162 COMMD8Q9NX08 183 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 TAB2Q9NYJ8 693 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 EHD2Q9NZN4 543 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 DNMT3BQ9UBC3 853 aaKnown RBP4.21□□□□□ -1.73
CNOT4-202ENST00000356162 UXTQ9UBK9 157 aaPredicted RBP4.21□□□□□ -1.73
CNOT4-202ENST00000356162 LIMA1Q9UHB6 759 aaKnown RBP4.21□□□□□ -1.73
CNOT4-202ENST00000356162 ZMYM5Q9UJ78 669 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 GTF3C4Q9UKN8 822 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 PCDHB11Q9Y5F2 797 aa4.21□□□□□ -1.73
CNOT4-202ENST00000356162 SLC38A8A6NNN8 435 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 LGALS16A8MUM7 142 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 C2CD4DB7Z1M9 353 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 ATP2C2O75185 946 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 LRRN2O75325 713 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 PAEPP09466 180 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 WEE2P0C1S8 567 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 CD58P19256 250 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 DDX6P26196 483 aaKnown RBP eCLIP4.21□□□□□ -1.74
CNOT4-202ENST00000356162 ZNF132P52740 706 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 COPB1P53618 953 aaKnown RBP4.21□□□□□ -1.74
CNOT4-202ENST00000356162 NTHL1P78549 312 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 CYP27A1Q02318 531 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 STILQ15468 1287 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 FKBP15Q5T1M5 1219 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 CYP4A22Q5TCH4 519 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 GRASPQ7Z6J2 395 aaPredicted RBP4.21□□□□□ -1.74
CNOT4-202ENST00000356162 ACOT1Q86TX2 421 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 DHX40Q8IX18 779 aaKnown RBP4.21□□□□□ -1.74
CNOT4-202ENST00000356162 PPM1KQ8N3J5 372 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 GPR161Q8N6U8 529 aaKnown RBP4.21□□□□□ -1.74
CNOT4-202ENST00000356162 SLC4A11Q8NBS3 891 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms