RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 STK32BQ9NY57 414 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 MAGED2Q9UNF1 606 aaPredicted RBP15.79■□□□□ 0.12
PTBP1-201ENST00000349038 PLA2G4CQ9UP65 541 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 TRMUO75648 421 aaKnown RBP15.79■□□□□ 0.12
PTBP1-201ENST00000349038 CSPG5O95196 566 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 F7P08709 466 aaPredicted RBP15.79■□□□□ 0.12
PTBP1-201ENST00000349038 POLR2MP0CAP2 368 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 CRABP2P29373 138 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 RPL5P46777 297 aaKnown RBP15.79■□□□□ 0.12
PTBP1-201ENST00000349038 KPNA1P52294 538 aaPredicted RBP15.79■□□□□ 0.12
PTBP1-201ENST00000349038 MAP3K10Q02779 954 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 DCUN1D2Q6PH85 259 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 NCCRP1Q6ZVX7 275 aaPredicted RBP15.79■□□□□ 0.12
PTBP1-201ENST00000349038 CRLF3Q8IUI8 442 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 RSAD2Q8WXG1 361 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 CCT7Q99832 543 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 ARHGEF4Q9NR80 690 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 GGA1Q9UJY5 639 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 DNALI1O14645 258 aaPredicted RBP15.79■□□□□ 0.12
PTBP1-201ENST00000349038 SLC16A4O15374 487 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 HNRNPCL1O60812 293 aaKnown RBP15.79■□□□□ 0.12
PTBP1-201ENST00000349038 PENKP01210 267 aaPredicted RBP15.79■□□□□ 0.12
PTBP1-201ENST00000349038 NFKBIAP25963 317 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 SOX11P35716 441 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 CMPK2Q5EBM0 449 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 DPH6Q7L8W6 267 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 ZNF720Q7Z2F6 126 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 IFNLR1Q8IU57 520 aaPredicted RBP15.79■□□□□ 0.12
PTBP1-201ENST00000349038 BBOF1Q8ND07 529 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 STKLD1Q8NE28 680 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 E2F7Q96AV8 911 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 SRPK1Q96SB4 655 aaKnown RBP15.79■□□□□ 0.12
PTBP1-201ENST00000349038 HSD17B14Q9BPX1 270 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 UBAP1Q9NZ09 502 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 ACTL7BQ9Y614 415 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 MYH11P35749 1972 aa15.79■□□□□ 0.12
PTBP1-201ENST00000349038 TMX2-CTNND1H3BSU7 103 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 NEMP1O14524 444 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 CAPN15O75808 1086 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 KCNA4P22459 653 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 PHBP35232 272 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 SCNN1DP51172 638 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 GDF10P55107 478 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 RPL7AP62424 266 aaKnown RBP15.78■□□□□ 0.12
PTBP1-201ENST00000349038 MTA1Q13330 715 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 ANKRD20A4Q4UJ75 823 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 SYDE2Q5VT97 1194 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 KRT27Q7Z3Y8 459 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 NET1Q7Z628 596 aaPredicted RBP15.78■□□□□ 0.12
PTBP1-201ENST00000349038 FAM156AQ8NDB6 213 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 ADAM32Q8TC27 787 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 PPP4R1Q8TF05 950 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 FAM172AQ8WUF8 416 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 SLCO2A1Q92959 643 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 PGBD4Q96DM1 585 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 ATXN7L3BQ96GX2 97 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 PCSK1NQ9UHG2 260 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 IVNS1ABPQ9Y6Y0 642 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 TNS1Q9HBL0 1735 aaKnown RBP15.78■□□□□ 0.12
PTBP1-201ENST00000349038 GOLGA8QA0A0J9YX86 632 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 GOLGA8OA6NCC3 632 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 E9PBE3 544 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 GOLGA8NF8WBI6 632 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 C6orf229H3BNL8 230 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 UGT1A9O60656 530 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 KLHL41O60662 606 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 TMEM259Q4ZIN3 620 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 HSP90AA5PQ58FG0 334 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 TMC7Q7Z402 723 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 DCAF4Q8WV16 495 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 GAB3Q8WWW8 586 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 ARHGEF1Q92888 912 aaKnown RBP15.78■□□□□ 0.12
PTBP1-201ENST00000349038 MOCOSQ96EN8 888 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 UGT1A7Q9HAW7 530 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 UGT1A10Q9HAW8 530 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 UGT1A8Q9HAW9 530 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 CYLDQ9NQC7 956 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 BARX2Q9UMQ3 279 aaPredicted RBP15.78■□□□□ 0.12
PTBP1-201ENST00000349038 SOX13Q9UN79 622 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 AP4B1Q9Y6B7 739 aa15.78■□□□□ 0.12
PTBP1-201ENST00000349038 ZC3H11AO75152 810 aaKnown RBP eCLIP15.77■□□□□ 0.129e-7■■□□□ 14.3
PTBP1-201ENST00000349038 CCDC166P0CW27 439 aa15.77■□□□□ 0.12
PTBP1-201ENST00000349038 SLC5A2P31639 672 aa15.77■□□□□ 0.12
PTBP1-201ENST00000349038 MFAP3P55082 362 aa15.77■□□□□ 0.12
PTBP1-201ENST00000349038 RPL10AP62906 217 aaKnown RBP15.77■□□□□ 0.12
PTBP1-201ENST00000349038 TSPY1Q01534 308 aa15.77■□□□□ 0.12
PTBP1-201ENST00000349038 NFX1Q12986 1120 aaKnown RBP15.77■□□□□ 0.12
PTBP1-201ENST00000349038 FASTKD5Q7L8L6 764 aaKnown RBP15.77■□□□□ 0.12
PTBP1-201ENST00000349038 UPF1Q92900 1129 aaKnown RBP eCLIP15.77■□□□□ 0.122e-21■■■■■ 76.3
PTBP1-201ENST00000349038 SEL1LQ9UBV2 794 aa15.77■□□□□ 0.12
PTBP1-201ENST00000349038 DENND3A2RUS2 1198 aa15.77■□□□□ 0.12
PTBP1-201ENST00000349038 NDC80O14777 642 aa15.77■□□□□ 0.12
PTBP1-201ENST00000349038 RIMBP2O15034 1052 aa15.77■□□□□ 0.12
PTBP1-201ENST00000349038 DCXO43602 365 aa15.77■□□□□ 0.12
PTBP1-201ENST00000349038 FOSP01100 380 aaPredicted RBP15.77■□□□□ 0.12
PTBP1-201ENST00000349038 VARSP26640 1264 aaKnown RBP15.77■□□□□ 0.12
PTBP1-201ENST00000349038 ALDH1A3P47895 512 aa15.77■□□□□ 0.12
PTBP1-201ENST00000349038 MTTPP55157 894 aa15.77■□□□□ 0.12
PTBP1-201ENST00000349038 ANO4Q32M45 955 aa15.77■□□□□ 0.12
PTBP1-201ENST00000349038 SLC9A9Q8IVB4 645 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms