RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 CLEC4CQ8WTT0 213 aa20.03■□□□□ 0.8
CHMP4A-201ENST00000347519 KCTD13Q8WZ19 329 aa20.03■□□□□ 0.8
CHMP4A-201ENST00000347519 ZNF653Q96CK0 615 aa20.03■□□□□ 0.8
CHMP4A-201ENST00000347519 C18orf8Q96DM3 657 aa20.03■□□□□ 0.8
CHMP4A-201ENST00000347519 PIWIL1Q96J94 861 aaKnown RBP20.03■□□□□ 0.8
CHMP4A-201ENST00000347519 HSFY1Q96LI6 401 aa20.03■□□□□ 0.8
CHMP4A-201ENST00000347519 C8orf48Q96LL4 319 aa20.03■□□□□ 0.8
CHMP4A-201ENST00000347519 UBXN6Q9BZV1 441 aa20.03■□□□□ 0.8
CHMP4A-201ENST00000347519 TTYH1Q9H313 450 aaPredicted RBP20.03■□□□□ 0.8
CHMP4A-201ENST00000347519 CYP4F11Q9HBI6 524 aa20.03■□□□□ 0.8
CHMP4A-201ENST00000347519 MYO1AQ9UBC5 1043 aa20.03■□□□□ 0.8
CHMP4A-201ENST00000347519 SALL4Q9UJQ4 1053 aa20.03■□□□□ 0.8
CHMP4A-201ENST00000347519 ZNF638Q14966 1978 aaKnown RBP20.02■□□□□ 0.8
CHMP4A-201ENST00000347519 TCRBV5S1A1TA0A578 114 aa20.02■□□□□ 0.8
CHMP4A-201ENST00000347519 PAPSS1O43252 624 aaPredicted RBP20.02■□□□□ 0.8
CHMP4A-201ENST00000347519 CLCN4P51793 760 aa20.02■□□□□ 0.8
CHMP4A-201ENST00000347519 SLC8A3P57103 927 aa20.02■□□□□ 0.8
CHMP4A-201ENST00000347519 ADIGQ0VDE8 80 aa20.02■□□□□ 0.8
CHMP4A-201ENST00000347519 RAB41Q5JT25 222 aa20.02■□□□□ 0.8
CHMP4A-201ENST00000347519 PDE12Q6L8Q7 609 aaKnown RBP20.02■□□□□ 0.8
CHMP4A-201ENST00000347519 CCAR2Q8N163 923 aaKnown RBP20.02■□□□□ 0.8
CHMP4A-201ENST00000347519 SCAMP5Q8TAC9 235 aa20.02■□□□□ 0.8
CHMP4A-201ENST00000347519 GIPC2Q8TF65 315 aa20.02■□□□□ 0.8
CHMP4A-201ENST00000347519 SLC22A17Q8WUG5 538 aa20.02■□□□□ 0.8
CHMP4A-201ENST00000347519 LRCH3Q96II8 777 aa20.02■□□□□ 0.8
CHMP4A-201ENST00000347519 NOX5Q96PH1 765 aa20.02■□□□□ 0.8
CHMP4A-201ENST00000347519 MIS12Q9H081 205 aa20.02■□□□□ 0.8
CHMP4A-201ENST00000347519 CNOT8Q9UFF9 292 aaKnown RBP20.02■□□□□ 0.8
CHMP4A-201ENST00000347519 FBXW11Q9UKB1 542 aa20.02■□□□□ 0.8
CHMP4A-201ENST00000347519 INTUQ9ULD6 942 aa20.02■□□□□ 0.8
CHMP4A-201ENST00000347519 YIPF1Q9Y548 306 aa20.02■□□□□ 0.8
CHMP4A-201ENST00000347519 TRANK1O15050 2925 aa20.02■□□□□ 0.79
CHMP4A-201ENST00000347519 MYO16Q9Y6X6 1858 aa20.01■□□□□ 0.79
CHMP4A-201ENST00000347519 COL6A3P12111 3177 aa20.01■□□□□ 0.79
CHMP4A-201ENST00000347519 CYP1A2P05177 515 aa20.01■□□□□ 0.79
CHMP4A-201ENST00000347519 CALB1P05937 261 aa20.01■□□□□ 0.79
CHMP4A-201ENST00000347519 USP46P62068 366 aa20.01■□□□□ 0.79
CHMP4A-201ENST00000347519 GPC5P78333 572 aa20.01■□□□□ 0.79
CHMP4A-201ENST00000347519 MTMR3Q13615 1198 aa20.01■□□□□ 0.79
CHMP4A-201ENST00000347519 RBM23Q86U06 439 aaKnown RBP20.01■□□□□ 0.79
CHMP4A-201ENST00000347519 SCUBE3Q8IX30 993 aa20.01■□□□□ 0.79
CHMP4A-201ENST00000347519 TCEAL8Q8IYN2 117 aa20.01■□□□□ 0.79
CHMP4A-201ENST00000347519 VCPIP1Q96JH7 1222 aa20.01■□□□□ 0.79
CHMP4A-201ENST00000347519 ULBP1Q9BZM6 244 aa20.01■□□□□ 0.79
CHMP4A-201ENST00000347519 SYNCQ9H7C4 482 aa20.01■□□□□ 0.79
CHMP4A-201ENST00000347519 CYLDQ9NQC7 956 aa20.01■□□□□ 0.79
CHMP4A-201ENST00000347519 NCANO14594 1321 aa20■□□□□ 0.79
CHMP4A-201ENST00000347519 GOLGA8SH3BPF8 625 aa20■□□□□ 0.79
CHMP4A-201ENST00000347519 TRIM66O15016 1216 aa20■□□□□ 0.79
CHMP4A-201ENST00000347519 EPCAMP16422 314 aa20■□□□□ 0.79
CHMP4A-201ENST00000347519 TKTL1P51854 596 aa20■□□□□ 0.79
CHMP4A-201ENST00000347519 SLC5A3P53794 718 aa20■□□□□ 0.79
CHMP4A-201ENST00000347519 TAF5Q15542 800 aa20■□□□□ 0.79
CHMP4A-201ENST00000347519 OR6B2Q6IFH4 312 aa20■□□□□ 0.79
CHMP4A-201ENST00000347519 PPP1R2P3Q6NXS1 205 aa20■□□□□ 0.79
CHMP4A-201ENST00000347519 BHLHA9Q7RTU4 235 aa20■□□□□ 0.79
CHMP4A-201ENST00000347519 KREMEN2Q8NCW0 462 aa20■□□□□ 0.79
CHMP4A-201ENST00000347519 IPO4Q8TEX9 1081 aaKnown RBP20■□□□□ 0.79
CHMP4A-201ENST00000347519 CTNNBL1Q8WYA6 563 aaPredicted RBP20■□□□□ 0.79
CHMP4A-201ENST00000347519 KHSRPQ92945 711 aaKnown RBP eCLIP20■□□□□ 0.79
CHMP4A-201ENST00000347519 MCRS1Q96EZ8 462 aa20■□□□□ 0.79
CHMP4A-201ENST00000347519 LRRC4Q9HBW1 653 aa20■□□□□ 0.79
CHMP4A-201ENST00000347519 PNPLA8Q9NP80 782 aa20■□□□□ 0.79
CHMP4A-201ENST00000347519 LZTFL1Q9NQ48 299 aa20■□□□□ 0.79
CHMP4A-201ENST00000347519 AVENQ9NQS1 362 aaPredicted RBP20■□□□□ 0.79
CHMP4A-201ENST00000347519 COG5Q9UP83 839 aa20■□□□□ 0.79
CHMP4A-201ENST00000347519 PRRG1O14668 218 aa19.99■□□□□ 0.79
CHMP4A-201ENST00000347519 GLUD1P00367 558 aa19.99■□□□□ 0.79
CHMP4A-201ENST00000347519 ELF1P32519 619 aa19.99■□□□□ 0.79
CHMP4A-201ENST00000347519 GTF2F1P35269 517 aaKnown RBP eCLIP19.99■□□□□ 0.79
CHMP4A-201ENST00000347519 ACADSBP45954 432 aa19.99■□□□□ 0.79
CHMP4A-201ENST00000347519 TUFMP49411 452 aaKnown RBP19.99■□□□□ 0.79
CHMP4A-201ENST00000347519 RBM10P98175 930 aaKnown RBP19.99■□□□□ 0.79
CHMP4A-201ENST00000347519 IFRD2Q12894 506 aaPredicted RBP19.99■□□□□ 0.79
CHMP4A-201ENST00000347519 ZNF268Q14587 947 aaPredicted RBP19.99■□□□□ 0.79
CHMP4A-201ENST00000347519 PLEKHA7Q6IQ23 1121 aa19.99■□□□□ 0.79
CHMP4A-201ENST00000347519 OLFML1Q6UWY5 402 aa19.99■□□□□ 0.79
CHMP4A-201ENST00000347519 NUP93Q8N1F7 819 aa19.99■□□□□ 0.79
CHMP4A-201ENST00000347519 MRPL38Q96DV4 380 aaKnown RBP19.99■□□□□ 0.79
CHMP4A-201ENST00000347519 SPATA17Q96L03 361 aa19.99■□□□□ 0.79
CHMP4A-201ENST00000347519 TRIM7Q9C029 511 aa19.99■□□□□ 0.79
CHMP4A-201ENST00000347519 PRDM12Q9H4Q4 367 aa19.99■□□□□ 0.79
CHMP4A-201ENST00000347519 OSGEPQ9NPF4 335 aa19.99■□□□□ 0.79
CHMP4A-201ENST00000347519 HSFX1Q9UBD0 423 aa19.99■□□□□ 0.79
CHMP4A-201ENST00000347519 PAXBP1Q9Y5B6 917 aa19.99■□□□□ 0.79
CHMP4A-201ENST00000347519 INSL5Q9Y5Q6 135 aa19.99■□□□□ 0.79
CHMP4A-201ENST00000347519 USP3Q9Y6I4 520 aa19.99■□□□□ 0.79
CHMP4A-201ENST00000347519 SLC38A8A6NNN8 435 aa19.98■□□□□ 0.79
CHMP4A-201ENST00000347519 USP17L7P0C7H9 530 aa19.98■□□□□ 0.79
CHMP4A-201ENST00000347519 MYBL1P10243 752 aa19.98■□□□□ 0.79
CHMP4A-201ENST00000347519 PGFP49763 221 aa19.98■□□□□ 0.79
CHMP4A-201ENST00000347519 GSCP56915 257 aaPredicted RBP19.98■□□□□ 0.79
CHMP4A-201ENST00000347519 RPL10AP62906 217 aaKnown RBP19.98■□□□□ 0.79
CHMP4A-201ENST00000347519 TWF1Q12792 350 aa19.98■□□□□ 0.79
CHMP4A-201ENST00000347519 MAMLD1Q13495 774 aa19.98■□□□□ 0.79
CHMP4A-201ENST00000347519 GRIN2CQ14957 1233 aa19.98■□□□□ 0.79
CHMP4A-201ENST00000347519 DUSP6Q16828 381 aa19.98■□□□□ 0.79
CHMP4A-201ENST00000347519 PPP1R15BQ5SWA1 713 aa19.98■□□□□ 0.79
CHMP4A-201ENST00000347519 LIN9Q5TKA1 542 aa19.98■□□□□ 0.79
CHMP4A-201ENST00000347519 ZNF662Q6ZS27 426 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms