RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 LCMT1Q9UIC8 334 aa10.65□□□□□ -0.7
RBFOX1-202ENST00000340209 C2CD2Q9Y426 696 aa10.65□□□□□ -0.7
RBFOX1-202ENST00000340209 LIASO43766 372 aa10.65□□□□□ -0.7
RBFOX1-202ENST00000340209 BRCC3P46736 316 aa10.65□□□□□ -0.7
RBFOX1-202ENST00000340209 YWHAGP61981 247 aaKnown RBP eCLIP10.65□□□□□ -0.7
RBFOX1-202ENST00000340209 PPP2R2AP63151 447 aa10.65□□□□□ -0.7
RBFOX1-202ENST00000340209 PURAQ00577 322 aaKnown RBP10.65□□□□□ -0.7
RBFOX1-202ENST00000340209 CNGA2Q16280 664 aa10.65□□□□□ -0.7
RBFOX1-202ENST00000340209 MORN1Q5T089 497 aa10.65□□□□□ -0.7
RBFOX1-202ENST00000340209 CASC4Q6P4E1 433 aa10.65□□□□□ -0.7
RBFOX1-202ENST00000340209 RSPH3Q86UC2 560 aa10.65□□□□□ -0.7
RBFOX1-202ENST00000340209 UNC45BQ8IWX7 931 aa10.65□□□□□ -0.7
RBFOX1-202ENST00000340209 PYROXD2Q8N2H3 581 aa10.65□□□□□ -0.7
RBFOX1-202ENST00000340209 ARFGAP1Q8N6T3 406 aa10.65□□□□□ -0.7
RBFOX1-202ENST00000340209 CHMP2BQ9UQN3 213 aa10.65□□□□□ -0.7
RBFOX1-202ENST00000340209 MAD1L1Q9Y6D9 718 aa10.65□□□□□ -0.7
RBFOX1-202ENST00000340209 MYO18AQ92614 2054 aaKnown RBP10.65□□□□□ -0.71
RBFOX1-202ENST00000340209 CCDC78A2IDD5 438 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 WDR91A4D1P6 747 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 F8W810 466 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 TRIM66O15016 1216 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 HMGCRP04035 888 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 PAEPP09466 180 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 CHN1P15882 459 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 KDELR1P24390 212 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 CTCFP49711 727 aaPredicted RBP10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 CLCNKBP51801 687 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 FCGRTP55899 365 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 SLMAPQ14BN4 828 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 CEP57Q86XR8 500 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 C4orf33Q8N1A6 199 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 TRAIPQ9BWF2 469 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 KRT82Q9NSB4 513 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 SMIM35A0A1B0GVV1 85 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 ATICP31939 592 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 SULT1E1P49888 294 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 PITX1P78337 314 aaPredicted RBP10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 ZNF467Q7Z7K2 595 aaPredicted RBP10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 ARFGAP2Q8N6H7 521 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 ARHGEF2Q92974 986 aaKnown RBP10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 KATNAL1Q9BW62 490 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 DDX43Q9NXZ2 648 aaKnown RBP10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 NME7Q9Y5B8 376 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 PRRC2BQ5JSZ5 2229 aaKnown RBP10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 COL1A2P08123 1366 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 EIF3HO15372 352 aaKnown RBP eCLIP10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 PAPSS1O43252 624 aaPredicted RBP10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 ZBED1O96006 694 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 CDKN2BP42772 138 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 LIG3P49916 1009 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 KCNA10Q16322 511 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 CCNG2Q16589 344 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 PTGISQ16647 500 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 ANKRD22Q5VYY1 191 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 TRNP1Q6NT89 227 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 UBR7Q8N806 425 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 ZNF560Q96MR9 790 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 SH3GL2Q99962 352 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 ZNF518BQ9C0D4 1074 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 AGO3Q9H9G7 860 aaKnown RBP10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 CYP3A43Q9HB55 503 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 ALG13Q9NP73 1137 aaKnown RBP10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 INTS9Q9NV88 658 aaKnown RBP10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 PRDM4Q9UKN5 801 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 MFHAS1Q9Y4C4 1052 aa10.64□□□□□ -0.71
RBFOX1-202ENST00000340209 H0YHG0 523 aa10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 PPFIA2O75334 1257 aa10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 AVILO75366 819 aa10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 KIAA0754O94854 1291 aa10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 TKTP29401 623 aaKnown RBP10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 MDH1P40925 334 aaKnown RBP10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 IFT88Q13099 833 aa10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 SCN4BQ8IWT1 228 aa10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 FAF2Q96CS3 445 aa10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 KCNK16Q96T55 309 aa10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 PRMT1Q99873 361 aaKnown RBP10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 RAB6BQ9NRW1 208 aa10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 NINJ2Q9NZG7 142 aa10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 PLXNB2O15031 1838 aa10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 KIAA0100Q14667 2235 aaKnown RBP10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 XPOTO43592 962 aaKnown RBP10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 SSTR1P30872 391 aa10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 RDXP35241 583 aaKnown RBP10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 MAGEA4P43358 317 aa10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 ROR1Q01973 937 aa10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 RNASELQ05823 741 aaKnown RBP10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 FAM187BQ17R55 369 aa10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 C17orf99Q6UX52 265 aa10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 PIGZQ86VD9 579 aa10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 PALM2Q8IXS6 379 aa10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 LINC01465Q8N7H1 131 aa10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 CCDC110Q8TBZ0 833 aa10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 RAET1EQ8TD07 263 aa10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 SIK2Q9H0K1 926 aa10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 KIF9Q9HAQ2 790 aa10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 DDX56Q9NY93 547 aaKnown RBP10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 PCDHGC3Q9UN70 934 aa10.63□□□□□ -0.71
RBFOX1-202ENST00000340209 RBM47A0AV96 593 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms