RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 HACE1Q8IYU2 909 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 C12orf29Q8N999 325 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 EXT2Q93063 718 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 MIEF2Q96C03 454 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 TUBB6Q9BUF5 446 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 SIK2Q9H0K1 926 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 WWP1Q9H0M0 922 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 C2orf40Q9H1Z8 148 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 MCM8Q9UJA3 840 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 MYH1P12882 1939 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 MYH4Q9Y623 1939 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 hCG_1818297A0A087WSY0 165 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 ADCY3O60266 1144 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 UNGP13051 313 aaPredicted RBP11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 KDELR1P24390 212 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 SERPINB4P48594 390 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 MCL1Q07820 350 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 NIPA1Q7RTP0 329 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 TMEM130Q8N3G9 435 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 RDM1Q8NG50 284 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 TFAP2BQ92481 460 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 SRPK1Q96SB4 655 aaKnown RBP11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 PORCNQ9H237 461 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 CYP39A1Q9NYL5 469 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 TLK1Q9UKI8 766 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 NR2E3Q9Y5X4 410 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 UBR2Q8IWV8 1755 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 E5RJQ4 531 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 KRT36O76013 467 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 STAG3L1P0CL83 205 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 PTPN4P29074 926 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 GARSP41250 739 aaKnown RBP11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 BNIP1Q12981 228 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 CRYMQ14894 314 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 PTPN20Q4JDL3 420 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 C12orf56Q8IXR9 622 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 AAASQ9NRG9 546 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 MGRN1O60291 552 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 C4BPAP04003 597 aaKnown RBP11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 HMGCRP04035 888 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 UBA1P22314 1058 aaKnown RBP11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 SOX11P35716 441 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 MMEL1Q495T6 779 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 IER5Q5VY09 327 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 POLNQ7Z5Q5 900 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 RASSF3Q86WH2 238 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 TEX9Q8N6V9 391 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 NT5C1AQ9BXI3 368 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 ADAM7Q9H2U9 754 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 EPB41L4BQ9H329 900 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 PTPRJQ12913 1337 aa11.53□□□□□ -0.56
SEMA4D-201ENST00000339861 EME2A4GXA9 379 aaPredicted RBP11.52□□□□□ -0.56
SEMA4D-201ENST00000339861 TMEM191CA6NGB0 347 aa11.52□□□□□ -0.56
SEMA4D-201ENST00000339861 USP12O75317 370 aa11.52□□□□□ -0.56
SEMA4D-201ENST00000339861 NFICP08651 508 aa11.52□□□□□ -0.56
SEMA4D-201ENST00000339861 MMP8P22894 467 aa11.52□□□□□ -0.56
SEMA4D-201ENST00000339861 NDST1P52848 882 aa11.52□□□□□ -0.56
SEMA4D-201ENST00000339861 DPYSL3Q14195 570 aa11.52□□□□□ -0.56
SEMA4D-201ENST00000339861 DCAF6Q58WW2 860 aa11.52□□□□□ -0.56
SEMA4D-201ENST00000339861 ZC3H12AQ5D1E8 599 aaKnown RBP11.52□□□□□ -0.56
SEMA4D-201ENST00000339861 SNX30Q5VWJ9 437 aa11.52□□□□□ -0.56
SEMA4D-201ENST00000339861 BRSK2Q8IWQ3 736 aa11.52□□□□□ -0.56
SEMA4D-201ENST00000339861 RYBPQ8N488 228 aaPredicted RBP11.52□□□□□ -0.56
SEMA4D-201ENST00000339861 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.52□□□□□ -0.56
SEMA4D-201ENST00000339861 ALKBH8Q96BT7 664 aaKnown RBP11.52□□□□□ -0.56
SEMA4D-201ENST00000339861 ACSS2Q9NR19 701 aa11.52□□□□□ -0.56
SEMA4D-201ENST00000339861 IL1RAPL1Q9NZN1 696 aa11.52□□□□□ -0.56
SEMA4D-201ENST00000339861 PAK5Q9P286 719 aa11.52□□□□□ -0.56
SEMA4D-201ENST00000339861 SLC24A2Q9UI40 661 aa11.52□□□□□ -0.56
SEMA4D-201ENST00000339861 MTO1Q9Y2Z2 717 aaKnown RBP11.52□□□□□ -0.56
SEMA4D-201ENST00000339861 GLI3P10071 1580 aa11.52□□□□□ -0.56
SEMA4D-201ENST00000339861 AIM2O14862 343 aa11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 LMNAP02545 664 aaKnown RBP11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 AP3M2P53677 418 aa11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 WNT7BP56706 349 aa11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 PDK4Q16654 411 aa11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 TTC39BQ5VTQ0 682 aaPredicted RBP11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 ALYREFQ86V81 257 aaKnown RBP11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 WDR49Q8IV35 697 aa11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 FAM13CQ8NE31 585 aa11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 WDR35Q9P2L0 1181 aa11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 TSPAN16Q9UKR8 245 aa11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 CHKBQ9Y259 395 aa11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 ZNF536O15090 1300 aa11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 GOLGA8QA0A0J9YX86 632 aa11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 GOLGA8OA6NCC3 632 aa11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 GOLGA8NF8WBI6 632 aa11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 GOLGA8TH3BQL2 631 aa11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 MICAL2O94851 1124 aa11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 VNN1O95497 513 aa11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 POU5F1BQ06416 359 aa11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 KIZQ2M2Z5 673 aa11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 SH3PXD2AQ5TCZ1 1133 aa11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 MPZL3Q6UWV2 235 aa11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 PPWD1Q96BP3 646 aaKnown RBP11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 SGF29Q96ES7 293 aa11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 CPXM1Q96SM3 734 aa11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 DDX50Q9BQ39 737 aaKnown RBP11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 RNPEPL1Q9HAU8 725 aa11.52□□□□□ -0.57
SEMA4D-201ENST00000339861 UBP1Q9NZI7 540 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms