RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 ELOVL4Q9GZR5 314 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 XAB2Q9HCS7 855 aaKnown RBP15.6■□□□□ 0.09
C9orf47-201ENST00000334490 SNCAIPQ9Y6H5 919 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 MON2Q7Z3U7 1717 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 SPECC1L-ADORA2AF8WAN1 911 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 GJB1P08034 283 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 FNTAP49354 379 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 CLNS1AP54105 237 aaKnown RBP15.59■□□□□ 0.09
C9orf47-201ENST00000334490 GEMP55040 296 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 FUT2Q10981 343 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 NBPF20Q3BBV1 942 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 SH3RF1Q7Z6J0 888 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 MCOLN2Q8IZK6 566 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 NOA1Q8NC60 698 aaKnown RBP15.59■□□□□ 0.09
C9orf47-201ENST00000334490 GIPC2Q8TF65 315 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 NCLNQ969V3 563 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 SPATA17Q96L03 361 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 ATXN3LQ9H3M9 355 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 KPNA1P52294 538 aaPredicted RBP15.59■□□□□ 0.09
C9orf47-201ENST00000334490 ZNF467Q7Z7K2 595 aaPredicted RBP15.59■□□□□ 0.09
C9orf47-201ENST00000334490 REXO1L1PQ8IX06 675 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 SCUBE3Q8IX30 993 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 TMEM199Q8N511 208 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 HIPK4Q8NE63 616 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 CDT1Q9H211 546 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 CASS4Q9NQ75 786 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 CHRM3P20309 590 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 BDNFP23560 247 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 CD52P31358 61 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 GRK4P32298 578 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 TUFMP49411 452 aaKnown RBP15.59■□□□□ 0.09
C9orf47-201ENST00000334490 CTCFP49711 727 aaPredicted RBP15.59■□□□□ 0.09
C9orf47-201ENST00000334490 RGS4P49798 205 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 HIBCHQ6NVY1 386 aaPredicted RBP15.59■□□□□ 0.09
C9orf47-201ENST00000334490 C4orf33Q8N1A6 199 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 USP13Q92995 863 aaPredicted RBP15.59■□□□□ 0.09
C9orf47-201ENST00000334490 STAMBPL1Q96FJ0 436 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 RNPEPQ9H4A4 650 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 PSMC3IPQ9P2W1 217 aaPredicted RBP15.59■□□□□ 0.09
C9orf47-201ENST00000334490 PPP1R11O60927 126 aaPredicted RBP15.59■□□□□ 0.09
C9orf47-201ENST00000334490 FARP2O94887 1054 aaPredicted RBP15.59■□□□□ 0.09
C9orf47-201ENST00000334490 JCHAINP01591 159 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 HMGCRP04035 888 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 FDFT1P37268 417 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.59■□□□□ 0.09
C9orf47-201ENST00000334490 ANO5Q75V66 913 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 GBP7Q8N8V2 638 aaPredicted RBP15.59■□□□□ 0.09
C9orf47-201ENST00000334490 DNAJC19Q96DA6 116 aa15.59■□□□□ 0.09
C9orf47-201ENST00000334490 CBX4O00257 560 aa15.58■□□□□ 0.09
C9orf47-201ENST00000334490 MICAL2O94851 1124 aa15.58■□□□□ 0.09
C9orf47-201ENST00000334490 PAEPP09466 180 aa15.58■□□□□ 0.09
C9orf47-201ENST00000334490 PPP3CAQ08209 521 aa15.58■□□□□ 0.09
C9orf47-201ENST00000334490 UGCGQ16739 394 aa15.58■□□□□ 0.09
C9orf47-201ENST00000334490 DENND5BQ6ZUT9 1274 aa15.58■□□□□ 0.09
C9orf47-201ENST00000334490 UNC45BQ8IWX7 931 aa15.58■□□□□ 0.09
C9orf47-201ENST00000334490 FRMD8Q9BZ67 464 aaPredicted RBP15.58■□□□□ 0.09
C9orf47-201ENST00000334490 ZNF212Q9UDV6 495 aa15.58■□□□□ 0.09
C9orf47-201ENST00000334490 ST3GAL5Q9UNP4 418 aa15.58■□□□□ 0.09
C9orf47-201ENST00000334490 L3MBTL1Q9Y468 752 aa15.58■□□□□ 0.09
C9orf47-201ENST00000334490 ORC6Q9Y5N6 252 aa15.58■□□□□ 0.09
C9orf47-201ENST00000334490 GMNCA6NCL1 334 aa15.58■□□□□ 0.08
C9orf47-201ENST00000334490 ZNF268Q14587 947 aaPredicted RBP15.58■□□□□ 0.08
C9orf47-201ENST00000334490 NFIL3Q16649 462 aa15.58■□□□□ 0.08
C9orf47-201ENST00000334490 TASP1Q9H6P5 420 aa15.58■□□□□ 0.08
C9orf47-201ENST00000334490 ZCCHC17Q9NP64 241 aaKnown RBP15.58■□□□□ 0.08
C9orf47-201ENST00000334490 FGFR1OP2Q9NVK5 253 aa15.58■□□□□ 0.08
C9orf47-201ENST00000334490 ZMYM2Q9UBW7 1377 aa15.58■□□□□ 0.08
C9orf47-201ENST00000334490 ONECUT3O60422 494 aaPredicted RBP15.58■□□□□ 0.08
C9orf47-201ENST00000334490 HMOX2P30519 316 aa15.58■□□□□ 0.08
C9orf47-201ENST00000334490 TBX4P57082 545 aa15.58■□□□□ 0.08
C9orf47-201ENST00000334490 PTENP60484 403 aa15.58■□□□□ 0.08
C9orf47-201ENST00000334490 PTK7Q13308 1070 aa15.58■□□□□ 0.08
C9orf47-201ENST00000334490 CAPRIN1Q14444 709 aaKnown RBP15.58■□□□□ 0.08
C9orf47-201ENST00000334490 TIGD7Q6NT04 549 aaPredicted RBP15.58■□□□□ 0.08
C9orf47-201ENST00000334490 HERC6Q8IVU3 1022 aa15.58■□□□□ 0.08
C9orf47-201ENST00000334490 UPF1Q92900 1129 aaKnown RBP eCLIP15.58■□□□□ 0.08
C9orf47-201ENST00000334490 PCMTD2Q9NV79 361 aa15.58■□□□□ 0.08
C9orf47-201ENST00000334490 OPHN1O60890 802 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 SERPIND1P05546 499 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 SPATA31C1P0DKV0 1188 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 MCL1Q07820 350 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 PTK6Q13882 451 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 TMEM86AQ8N2M4 240 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 NSMCE4AQ9NXX6 385 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 SLC25A13Q9UJS0 675 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 AGTP01019 485 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 TBCCQ15814 346 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.57■□□□□ 0.08
C9orf47-201ENST00000334490 WSCD1Q658N2 575 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 PPTC7Q8NI37 304 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 CD99L2Q8TCZ2 262 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 CDK5RAP1Q96SZ6 601 aaKnown RBP15.57■□□□□ 0.08
C9orf47-201ENST00000334490 KLF6Q99612 283 aaPredicted RBP15.57■□□□□ 0.08
C9orf47-201ENST00000334490 ZFP69BQ9UJL9 534 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 RPS6KL1Q9Y6S9 549 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 E2F8A0AVK6 867 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 GYG2O15488 501 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 PRPF4O43172 522 aaKnown RBP eCLIP15.57■□□□□ 0.08
C9orf47-201ENST00000334490 HAUS5O94927 633 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 NFICP08651 508 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms