RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 GJB4Q9NTQ9 266 aa13.79□□□□□ -0.2
TRAK1-201ENST00000327628 UXTQ9UBK9 157 aaPredicted RBP13.79□□□□□ -0.2
TRAK1-201ENST00000327628 HACD1B0YJ81 288 aa13.79□□□□□ -0.2
TRAK1-201ENST00000327628 IMPDH2P12268 514 aa13.79□□□□□ -0.2
TRAK1-201ENST00000327628 PTPN3P26045 913 aa13.79□□□□□ -0.2
TRAK1-201ENST00000327628 GMPSP49915 693 aaPredicted RBP13.79□□□□□ -0.2
TRAK1-201ENST00000327628 C1QBPQ07021 282 aaKnown RBP13.79□□□□□ -0.2
TRAK1-201ENST00000327628 STK4Q13043 487 aa13.79□□□□□ -0.2
TRAK1-201ENST00000327628 CAMK2GQ13555 558 aaPredicted RBP13.79□□□□□ -0.2
TRAK1-201ENST00000327628 ZCCHC8Q6NZY4 707 aaKnown RBP13.79□□□□□ -0.2
TRAK1-201ENST00000327628 CYP4Z2PQ8N1L4 340 aa13.79□□□□□ -0.2
TRAK1-201ENST00000327628 TC2NQ8N9U0 490 aa13.79□□□□□ -0.2
TRAK1-201ENST00000327628 TMA16Q96EY4 203 aaKnown RBP13.79□□□□□ -0.2
TRAK1-201ENST00000327628 TMEM237Q96Q45 408 aa13.79□□□□□ -0.2
TRAK1-201ENST00000327628 ECSITQ9BQ95 431 aa13.79□□□□□ -0.2
TRAK1-201ENST00000327628 PABPC3Q9H361 631 aaKnown RBP13.79□□□□□ -0.2
TRAK1-201ENST00000327628 VTI1BQ9UEU0 232 aa13.79□□□□□ -0.2
TRAK1-201ENST00000327628 KDSRQ06136 332 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 BST2Q10589 180 aaKnown RBP13.78□□□□□ -0.2
TRAK1-201ENST00000327628 SKIV2LQ15477 1246 aaKnown RBP13.78□□□□□ -0.2
TRAK1-201ENST00000327628 EZH2Q15910 746 aaKnown RBP13.78□□□□□ -0.2
TRAK1-201ENST00000327628 FAM83AQ86UY5 434 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 SKA1Q96BD8 255 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 SCUBE2Q9NQ36 999 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 NPHP3-ACAD11A0A0J9YXS1 232 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 TMEM120BA0PK00 339 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 SOX6P35712 828 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 CYTH1Q15438 398 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 CCDC92Q53HC0 331 aaPredicted RBP13.78□□□□□ -0.2
TRAK1-201ENST00000327628 WDR93Q6P2C0 686 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 SLFN11Q7Z7L1 901 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 TRHDEQ9UKU6 1024 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 USP1O94782 785 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 EPHB2P29323 1055 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 GUCA1AP43080 201 aaPredicted RBP13.78□□□□□ -0.2
TRAK1-201ENST00000327628 PRIM2P49643 509 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 PEX5P50542 639 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 ZNF410Q86VK4 478 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 AGAP3Q96P47 875 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 DIABLOQ9NR28 239 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 STMN3Q9NZ72 180 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 VPS51Q9UID3 782 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 RNF112Q9ULX5 631 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 RAD51CO43502 376 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 SERPIND1P05546 499 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 IRX1P78414 480 aaPredicted RBP13.78□□□□□ -0.2
TRAK1-201ENST00000327628 CCNG2Q16589 344 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 FAM182BQ5T319 152 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 SLC30A5Q8TAD4 765 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 DNAJC9Q8WXX5 260 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 VAT1Q99536 393 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 TRIM51Q9BSJ1 452 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 POLG2Q9UHN1 485 aa13.78□□□□□ -0.2
TRAK1-201ENST00000327628 RARGP13631 454 aa13.77□□□□□ -0.2
TRAK1-201ENST00000327628 NR2C2P49116 596 aa13.77□□□□□ -0.2
TRAK1-201ENST00000327628 GUCY1A3Q02108 690 aa13.77□□□□□ -0.2
TRAK1-201ENST00000327628 PDIA6Q15084 440 aa13.77□□□□□ -0.2
TRAK1-201ENST00000327628 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.77□□□□□ -0.2
TRAK1-201ENST00000327628 SPIRE2Q8WWL2 714 aa13.77□□□□□ -0.2
TRAK1-201ENST00000327628 OLFM1Q99784 485 aa13.77□□□□□ -0.2
TRAK1-201ENST00000327628 SLC39A10Q9ULF5 831 aa13.77□□□□□ -0.2
TRAK1-201ENST00000327628 CEMIPQ8WUJ3 1361 aa13.77□□□□□ -0.2
TRAK1-201ENST00000327628 MYO1GB0I1T2 1018 aa13.77□□□□□ -0.2
TRAK1-201ENST00000327628 ASS1P00966 412 aaKnown RBP13.77□□□□□ -0.2
TRAK1-201ENST00000327628 C1orf131Q8NDD1 294 aaKnown RBP13.77□□□□□ -0.2
TRAK1-201ENST00000327628 CEP44Q9C0F1 390 aa13.77□□□□□ -0.2
TRAK1-201ENST00000327628 MAF1Q9H063 256 aa13.77□□□□□ -0.2
TRAK1-201ENST00000327628 CLPBQ9H078 707 aa13.77□□□□□ -0.2
TRAK1-201ENST00000327628 DEFB129Q9H1M3 183 aa13.77□□□□□ -0.2
TRAK1-201ENST00000327628 MSH4O15457 936 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 STRNO43815 780 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 AP1G2O75843 785 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 RTN3O95197 1032 aaPredicted RBP13.77□□□□□ -0.21
TRAK1-201ENST00000327628 ITGB3P05106 788 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 LONRF1Q17RB8 773 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 GNASQ5JWF2 1037 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 LMBRD2Q68DH5 695 aaPredicted RBP13.77□□□□□ -0.21
TRAK1-201ENST00000327628 DENND1BQ6P3S1 775 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 GSPT2Q8IYD1 628 aaKnown RBP13.77□□□□□ -0.21
TRAK1-201ENST00000327628 FBXO32Q969P5 355 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 WNK4Q96J92 1243 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 DCLK3Q9C098 648 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.77□□□□□ -0.21
TRAK1-201ENST00000327628 SYBUQ9NX95 663 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 DNPEPQ9ULA0 475 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 PPP1R3GB7ZBB8 358 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 CXCL11O14625 94 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 ADCY3O60266 1144 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 FKBP6O75344 327 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 PDGFRBP09619 1106 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 CCDC159P0C7I6 412 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 SOAT1P35610 550 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 FMR1Q06787 632 aaKnown RBP eCLIP13.77□□□□□ -0.21
TRAK1-201ENST00000327628 CCDC153Q494R4 210 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 PALB2Q86YC2 1186 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 FBXL16Q8N461 479 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 BSNDQ8WZ55 320 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 WDR24Q96S15 920 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 ASB7Q9H672 318 aa13.77□□□□□ -0.21
TRAK1-201ENST00000327628 THG1LQ9NWX6 298 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms