RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 ANKS1BQ7Z6G8 1248 aa20.22■□□□□ 0.83
CHMP6-201ENST00000325167 PCGF5Q86SE9 256 aa20.22■□□□□ 0.83
CHMP6-201ENST00000325167 RELL1Q8IUW5 271 aa20.22■□□□□ 0.83
CHMP6-201ENST00000325167 KLHDC9Q8NEP7 349 aa20.22■□□□□ 0.83
CHMP6-201ENST00000325167 SLC35B2Q8TB61 432 aa20.22■□□□□ 0.83
CHMP6-201ENST00000325167 ROPN1BQ9BZX4 212 aaPredicted RBP20.22■□□□□ 0.83
CHMP6-201ENST00000325167 ROPN1Q9HAT0 212 aaPredicted RBP20.22■□□□□ 0.83
CHMP6-201ENST00000325167 TRIP12Q14669 1992 aaPredicted RBP20.22■□□□□ 0.83
CHMP6-201ENST00000325167 TRIP11Q15643 1979 aa20.21■□□□□ 0.83
CHMP6-201ENST00000325167 ZNF487B1APH4 448 aa20.21■□□□□ 0.83
CHMP6-201ENST00000325167 RIPK2O43353 540 aa20.21■□□□□ 0.83
CHMP6-201ENST00000325167 IVLP07476 585 aa20.21■□□□□ 0.83
CHMP6-201ENST00000325167 SKIP12755 728 aa20.21■□□□□ 0.83
CHMP6-201ENST00000325167 CACNB2Q08289 660 aaPredicted RBP20.21■□□□□ 0.83
CHMP6-201ENST00000325167 MGAT3Q09327 533 aa20.21■□□□□ 0.83
CHMP6-201ENST00000325167 OASLQ15646 514 aaKnown RBP20.21■□□□□ 0.83
CHMP6-201ENST00000325167 C6orf118Q5T5N4 469 aa20.21■□□□□ 0.83
CHMP6-201ENST00000325167 KCTD16Q68DU8 428 aa20.21■□□□□ 0.83
CHMP6-201ENST00000325167 TMEM86AQ8N2M4 240 aa20.21■□□□□ 0.83
CHMP6-201ENST00000325167 MAK16Q9BXY0 300 aaKnown RBP20.21■□□□□ 0.83
CHMP6-201ENST00000325167 PCDH9Q9HC56 1237 aa20.21■□□□□ 0.83
CHMP6-201ENST00000325167 DNPEPQ9ULA0 475 aa20.21■□□□□ 0.83
CHMP6-201ENST00000325167 SMAPO00193 183 aa20.2■□□□□ 0.82
CHMP6-201ENST00000325167 PTGESO14684 152 aa20.2■□□□□ 0.82
CHMP6-201ENST00000325167 SPTLC1O15269 473 aa20.2■□□□□ 0.82
CHMP6-201ENST00000325167 THP07101 528 aa20.2■□□□□ 0.82
CHMP6-201ENST00000325167 RPL9P32969 192 aaKnown RBP20.2■□□□□ 0.82
CHMP6-201ENST00000325167 PTPN9P43378 593 aa20.2■□□□□ 0.82
CHMP6-201ENST00000325167 RGS7P49802 495 aa20.2■□□□□ 0.82
CHMP6-201ENST00000325167 SOX4Q06945 474 aaPredicted RBP20.2■□□□□ 0.82
CHMP6-201ENST00000325167 IZUMO3Q5VZ72 239 aa20.2■□□□□ 0.82
CHMP6-201ENST00000325167 SLC26A9Q7LBE3 791 aa20.2■□□□□ 0.82
CHMP6-201ENST00000325167 OR2W6PQ8NHA6 318 aa20.2■□□□□ 0.82
CHMP6-201ENST00000325167 SPATA18Q8TC71 538 aa20.2■□□□□ 0.82
CHMP6-201ENST00000325167 PGM2Q96G03 612 aa20.2■□□□□ 0.82
CHMP6-201ENST00000325167 EPB41L4BQ9H329 900 aa20.2■□□□□ 0.82
CHMP6-201ENST00000325167 CENPHQ9H3R5 247 aa20.2■□□□□ 0.82
CHMP6-201ENST00000325167 SQORQ9Y6N5 450 aa20.2■□□□□ 0.82
CHMP6-201ENST00000325167 SRRM3A6NNA2 597 aaPredicted RBP20.19■□□□□ 0.82
CHMP6-201ENST00000325167 APOC4-APOC2K7ER74 178 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 DNALI1O14645 258 aaPredicted RBP20.19■□□□□ 0.82
CHMP6-201ENST00000325167 CST8O60676 142 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 CAND2O75155 1236 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 ENDOD1O94919 500 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 APOC2P02655 101 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 ASGR1P07306 291 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 SLC29A2Q14542 456 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 SMTNL2Q2TAL5 461 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 MRPL10Q7Z7H8 261 aaKnown RBP20.19■□□□□ 0.82
CHMP6-201ENST00000325167 RFX6Q8HWS3 928 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 ARRDC4Q8NCT1 418 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 HNRNPABQ99729 332 aaKnown RBP20.19■□□□□ 0.82
CHMP6-201ENST00000325167 TSPYL2Q9H2G4 693 aaPredicted RBP20.19■□□□□ 0.82
CHMP6-201ENST00000325167 SEMA4AQ9H3S1 761 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 UBN1Q9NPG3 1134 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 PCSK1NQ9UHG2 260 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 NME7Q9Y5B8 376 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 CYB561D2O14569 222 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 XPO1O14980 1071 aaKnown RBP20.19■□□□□ 0.82
CHMP6-201ENST00000325167 ZNF623O75123 536 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 CHRNA1P02708 482 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 PDGFRBP09619 1106 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 FGFR1P11362 822 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 LHX1P48742 406 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 PLCB3Q01970 1234 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 MORF4L2Q15014 288 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 EFHC1Q5JVL4 640 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 HIBCHQ6NVY1 386 aaPredicted RBP20.19■□□□□ 0.82
CHMP6-201ENST00000325167 CCDC25Q86WR0 208 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 B3GALNT2Q8NCR0 500 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 HSPH1Q92598 858 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 PHACTR1Q9C0D0 580 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 DPEP3Q9H4B8 488 aa20.19■□□□□ 0.82
CHMP6-201ENST00000325167 CWC15Q9P013 229 aaKnown RBP20.19■□□□□ 0.82
CHMP6-201ENST00000325167 MCF2LO15068 1137 aa20.18■□□□□ 0.82
CHMP6-201ENST00000325167 MDM4O15151 490 aa20.18■□□□□ 0.82
CHMP6-201ENST00000325167 TP73O15350 636 aa20.18■□□□□ 0.82
CHMP6-201ENST00000325167 PAPSS1O43252 624 aaPredicted RBP20.18■□□□□ 0.82
CHMP6-201ENST00000325167 PTK7Q13308 1070 aa20.18■□□□□ 0.82
CHMP6-201ENST00000325167 TRIP13Q15645 432 aaPredicted RBP20.18■□□□□ 0.82
CHMP6-201ENST00000325167 KCNA10Q16322 511 aa20.18■□□□□ 0.82
CHMP6-201ENST00000325167 PTGISQ16647 500 aa20.18■□□□□ 0.82
CHMP6-201ENST00000325167 CCDC14Q49A88 953 aa20.18■□□□□ 0.82
CHMP6-201ENST00000325167 KCNT1Q5JUK3 1230 aa20.18■□□□□ 0.82
CHMP6-201ENST00000325167 RNF180Q86T96 592 aa20.18■□□□□ 0.82
CHMP6-201ENST00000325167 ZCCHC9Q8N567 271 aaKnown RBP20.18■□□□□ 0.82
CHMP6-201ENST00000325167 SH2D3CQ8N5H7 860 aa20.18■□□□□ 0.82
CHMP6-201ENST00000325167 PGBD4Q96DM1 585 aa20.18■□□□□ 0.82
CHMP6-201ENST00000325167 CNOT10Q9H9A5 744 aaKnown RBP20.18■□□□□ 0.82
CHMP6-201ENST00000325167 TPX2Q9ULW0 747 aaKnown RBP20.18■□□□□ 0.82
CHMP6-201ENST00000325167 SHOC2Q9UQ13 582 aa20.18■□□□□ 0.82
CHMP6-201ENST00000325167 GABRDO14764 452 aa20.17■□□□□ 0.82
CHMP6-201ENST00000325167 PRKAR2AP13861 404 aaKnown RBP20.17■□□□□ 0.82
CHMP6-201ENST00000325167 ADORA2BP29275 332 aa20.17■□□□□ 0.82
CHMP6-201ENST00000325167 ARSEP51690 589 aa20.17■□□□□ 0.82
CHMP6-201ENST00000325167 CDH6P55285 790 aa20.17■□□□□ 0.82
CHMP6-201ENST00000325167 OTUD4Q01804 1114 aaKnown RBP20.17■□□□□ 0.82
CHMP6-201ENST00000325167 KRT81Q14533 505 aa20.17■□□□□ 0.82
CHMP6-201ENST00000325167 P3H1Q32P28 736 aa20.17■□□□□ 0.82
CHMP6-201ENST00000325167 CCSAPQ6IQ19 270 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms