RNA–Protein interactions for RNA: ENST00000324727.8

SCN4B-201, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4B, Length 4,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-201ENST00000324727 DCDC2CA8MYV0 355 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 NCAM1P13591 858 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 EPHB2P29323 1055 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 NAMPTP43490 491 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 LRRC74BQ6ZQY2 392 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 RDM1Q8NG50 284 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 ZNF384Q8TF68 577 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 RMDN1Q96DB5 314 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 KLF6Q99612 283 aaPredicted RBP12.1□□□□□ -0.47
SCN4B-201ENST00000324727 WDR18Q9BV38 432 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 UBXN6Q9BZV1 441 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 VPS11Q9H270 941 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 UBAP1Q9NZ09 502 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 PFDN6O15212 129 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 ARSEP51690 589 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 TAF1BQ53T94 588 aaPredicted RBP12.1□□□□□ -0.47
SCN4B-201ENST00000324727 PRPF39Q86UA1 669 aaKnown RBP12.1□□□□□ -0.47
SCN4B-201ENST00000324727 MTDHQ86UE4 582 aaKnown RBP12.1□□□□□ -0.47
SCN4B-201ENST00000324727 MKL1Q969V6 931 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 TMEM237Q96Q45 408 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 SP110Q9HB58 689 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 TAF6P49848 677 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 EIF3EP60228 445 aaKnown RBP12.1□□□□□ -0.47
SCN4B-201ENST00000324727 MAPK7Q13164 816 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 GOLGA7BQ2TAP0 167 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 DEFB115Q30KQ5 88 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 TRIM72Q6ZMU5 477 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 SCUBE1Q8IWY4 988 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 DNERQ8NFT8 737 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 ZNF507Q8TCN5 953 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 SH3TC2Q8TF17 1288 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 PGLYRP2Q96PD5 576 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 SH3GL2Q99962 352 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 MKNK1Q9BUB5 465 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 ZCWPW1Q9H0M4 648 aa12.1□□□□□ -0.47
SCN4B-201ENST00000324727 PSMC3IPQ9P2W1 217 aaPredicted RBP12.1□□□□□ -0.47
SCN4B-201ENST00000324727 PTPRZ1P23471 2315 aaPredicted RBP12.1□□□□□ -0.47
SCN4B-201ENST00000324727 H0Y626 953 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 TRIM16O95361 564 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 CD4P01730 458 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 RARGP13631 454 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 TPI1P60174 286 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 POU5F1BQ06416 359 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 TBL3Q12788 808 aaKnown RBP12.09□□□□□ -0.47
SCN4B-201ENST00000324727 INAQ16352 499 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 HIF1AQ16665 826 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 CDKAL1Q5VV42 579 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 SLC20A1Q8WUM9 679 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 ZNF184Q99676 751 aaPredicted RBP12.09□□□□□ -0.47
SCN4B-201ENST00000324727 PAIP1Q9H074 479 aaKnown RBP12.09□□□□□ -0.47
SCN4B-201ENST00000324727 PCDHB7Q9Y5E2 793 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 CEP290O15078 2479 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 KCNN4O15554 427 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 ENDOD1O94919 500 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 MLH1P40692 756 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 MMP14P50281 582 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 ATXN3P54252 364 aaPredicted RBP12.09□□□□□ -0.47
SCN4B-201ENST00000324727 CDC42EP1Q00587 391 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 ZNF484Q5JVG2 852 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 TMTC4Q5T4D3 741 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 CREG2Q8IUH2 290 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 NKX2-3Q8TAU0 364 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 NFKBIEO00221 500 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 PDE2AO00408 941 aaPredicted RBP12.09□□□□□ -0.47
SCN4B-201ENST00000324727 KLHL2O95198 593 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 TGFB3P10600 412 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 ENO3P13929 434 aaPredicted RBP12.09□□□□□ -0.47
SCN4B-201ENST00000324727 XRCC4Q13426 336 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 CUL2Q13617 745 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 HABP4Q5JVS0 413 aaKnown RBP12.09□□□□□ -0.47
SCN4B-201ENST00000324727 FAXCQ5TGI0 409 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 MPZL3Q6UWV2 235 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 SYDE1Q6ZW31 735 aaPredicted RBP12.09□□□□□ -0.47
SCN4B-201ENST00000324727 PATL1Q86TB9 770 aaKnown RBP12.09□□□□□ -0.47
SCN4B-201ENST00000324727 RIBC1Q8N443 379 aaPredicted RBP12.09□□□□□ -0.47
SCN4B-201ENST00000324727 MAGEC3Q8TD91 643 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 CMTM5Q96DZ9 223 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 TINF2Q9BSI4 451 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 MANSC1Q9H8J5 431 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 ATXN10Q9UBB4 475 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 SLC8A2Q9UPR5 921 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 KPNA7A9QM74 516 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 KIAA0391O15091 583 aaKnown RBP12.09□□□□□ -0.47
SCN4B-201ENST00000324727 ATP6V1C1P21283 382 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 MAGEA4P43358 317 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 STX3Q13277 289 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 ITGB3BPQ13352 177 aaPredicted RBP12.09□□□□□ -0.47
SCN4B-201ENST00000324727 ARID3BQ8IVW6 561 aaPredicted RBP12.09□□□□□ -0.47
SCN4B-201ENST00000324727 GPATCH2LQ9NWQ4 482 aa12.09□□□□□ -0.47
SCN4B-201ENST00000324727 MED1Q15648 1581 aaPredicted RBP12.09□□□□□ -0.47
SCN4B-201ENST00000324727 CST8O60676 142 aa12.08□□□□□ -0.48
SCN4B-201ENST00000324727 ELNP15502 786 aa12.08□□□□□ -0.48
SCN4B-201ENST00000324727 PCSK1P29120 753 aa12.08□□□□□ -0.48
SCN4B-201ENST00000324727 NUP107P57740 925 aa12.08□□□□□ -0.48
SCN4B-201ENST00000324727 GPR141Q7Z602 305 aa12.08□□□□□ -0.48
SCN4B-201ENST00000324727 SLC47A2Q86VL8 602 aa12.08□□□□□ -0.48
SCN4B-201ENST00000324727 ARRDC4Q8NCT1 418 aa12.08□□□□□ -0.48
SCN4B-201ENST00000324727 IFT43Q96FT9 208 aa12.08□□□□□ -0.48
SCN4B-201ENST00000324727 MRPL1Q9BYD6 325 aaKnown RBP12.08□□□□□ -0.48
SCN4B-201ENST00000324727 PLEKHA5Q9HAU0 1116 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms