RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 KREMEN1Q96MU8 473 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 RILPQ96NA2 401 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 TMEM117Q9H0C3 514 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 OLFML3Q9NRN5 406 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 AGPAT3Q9NRZ7 376 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 TUBA8Q9NY65 449 aaPredicted RBP8.28□□□□□ -1.08
RTL3-201ENST00000321110 PADI4Q9UM07 663 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 GNEQ9Y223 722 aaKnown RBP8.28□□□□□ -1.08
RTL3-201ENST00000321110 FRMD4BQ9Y2L6 1034 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 SNED1Q8TER0 1413 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.28□□□□□ -1.08
RTL3-201ENST00000321110 TMX2-CTNND1H3BSU7 103 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 hCG_1984214I3L0E3 225 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 K7EPI3 171 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 FBXO21O94952 628 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 STAMBPO95630 424 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 CALCAP01258 141 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 CD58P19256 250 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 CLCN2P51788 898 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 TMPRSS15P98073 1019 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 PEX6Q13608 980 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 C2CD6Q53TS8 623 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 DCLRE1AQ6PJP8 1040 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 SLC7A5P1Q8MH63 180 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 ZNF713Q8N859 430 aaPredicted RBP8.28□□□□□ -1.08
RTL3-201ENST00000321110 CEP95Q96GE4 821 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 GPATCH1Q9BRR8 931 aaKnown RBP8.28□□□□□ -1.08
RTL3-201ENST00000321110 TCHPQ9BT92 498 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 EIF2AQ9BY44 585 aaKnown RBP8.28□□□□□ -1.08
RTL3-201ENST00000321110 SLC2A11Q9BYW1 496 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 KLC2Q9H0B6 622 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 ZNF287Q9HBT7 754 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 XPNPEP1Q9NQW7 623 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 TRNAU1APQ9NX07 287 aaKnown RBP8.28□□□□□ -1.08
RTL3-201ENST00000321110 PSMD13Q9UNM6 376 aa8.28□□□□□ -1.08
RTL3-201ENST00000321110 A0A0B4J269 797 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 I3L4J1 428 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 EIF3DO15371 548 aaKnown RBP eCLIP8.27□□□□□ -1.09
RTL3-201ENST00000321110 GRIN3BO60391 1043 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 KRT10P13645 584 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 RPA1P27694 616 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 GJC1P36383 396 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 GCLMP48507 274 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 CTBSQ01459 385 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 FAAP100Q0VG06 881 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 TUBB3Q13509 450 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 CYTH1Q15438 398 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 HIF1AQ16665 826 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 KLHL38Q2WGJ6 581 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 EPC2Q52LR7 807 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 C6orf183Q5T699 404 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 ANKRD22Q5VYY1 191 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 OGFOD2Q6N063 350 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 NEPROQ6NW34 567 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 DEFB107AQ8IZN7 70 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 CENPSQ8N2Z9 138 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 TSPAN14Q8NG11 270 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 ITPKCQ96DU7 683 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 NLRP4Q96MN2 994 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 FIZ1Q96SL8 496 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 EYA3Q99504 573 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 GPCPD1Q9NPB8 672 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 TBC1D23Q9NUY8 699 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 KLHL11Q9NVR0 708 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 SHOC2Q9UQ13 582 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 GPC6Q9Y625 555 aaPredicted RBP8.27□□□□□ -1.09
RTL3-201ENST00000321110 TAF1LQ8IZX4 1826 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 CYB561D2O14569 222 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 XPO1O14980 1071 aaKnown RBP8.27□□□□□ -1.09
RTL3-201ENST00000321110 ATP2A1O14983 1001 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 SLC26A4O43511 780 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 LDHAP00338 332 aaKnown RBP8.27□□□□□ -1.09
RTL3-201ENST00000321110 CYP11B1P15538 503 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 ITGAXP20702 1163 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 PHBP35232 272 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 PPARGP37231 505 aaPredicted RBP8.27□□□□□ -1.09
RTL3-201ENST00000321110 COPAP53621 1224 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 NUP107P57740 925 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 PTK7Q13308 1070 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 CHI3L2Q15782 390 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 C1orf220Q5T0J3 134 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 CIAPIN1Q6FI81 312 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 ACAD10Q6JQN1 1059 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 NANOGP8Q6NSW7 305 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 FBXW8Q8N3Y1 598 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 CCDC33Q8N5R6 958 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 MYCT1Q8N699 235 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 FBXO36Q8NEA4 188 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 DDX1Q92499 740 aaKnown RBP8.27□□□□□ -1.09
RTL3-201ENST00000321110 E2F7Q96AV8 911 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 ERLEC1Q96DZ1 483 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 PAIP1Q9H074 479 aaKnown RBP8.27□□□□□ -1.09
RTL3-201ENST00000321110 PSTPIP2Q9H939 334 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 C6orf203Q9P0P8 240 aaPredicted RBP8.27□□□□□ -1.09
RTL3-201ENST00000321110 EBF1Q9UH73 591 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 PACSIN3Q9UKS6 424 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 RNF11Q9Y3C5 154 aa8.27□□□□□ -1.09
RTL3-201ENST00000321110 ASTN2O75129 1339 aaPredicted RBP8.26□□□□□ -1.09
RTL3-201ENST00000321110 SOBPA7XYQ1 873 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 PI4K2BG5E9Z4 385 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms