RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 AQP5P55064 265 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 CXCL9Q07325 125 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 FUT2Q10981 343 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 CCL15Q16663 113 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 FAM83EQ2M2I3 478 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 NBPF12Q5TAG4 269 aaPredicted RBP14.28□□□□□ -0.12
SPAST-201ENST00000315285 SLFN11Q7Z7L1 901 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 FAM131BQ86XD5 332 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 ZBED2Q9BTP6 218 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 SUFUQ9UMX1 484 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 AP1G2O75843 785 aa14.27□□□□□ -0.12
SPAST-201ENST00000315285 VTNP04004 478 aa14.27□□□□□ -0.12
SPAST-201ENST00000315285 BGNP21810 368 aa14.27□□□□□ -0.12
SPAST-201ENST00000315285 ATICP31939 592 aa14.27□□□□□ -0.12
SPAST-201ENST00000315285 HDAC4P56524 1084 aa14.27□□□□□ -0.12
SPAST-201ENST00000315285 PPP3CAQ08209 521 aa14.27□□□□□ -0.12
SPAST-201ENST00000315285 MFSD7Q6UXD7 560 aa14.27□□□□□ -0.12
SPAST-201ENST00000315285 DCP1BQ8IZD4 617 aaKnown RBP14.27□□□□□ -0.12
SPAST-201ENST00000315285 EPS8L1Q8TE68 723 aa14.27□□□□□ -0.12
SPAST-201ENST00000315285 TMEM120AQ9BXJ8 343 aa14.27□□□□□ -0.12
SPAST-201ENST00000315285 RUBCNLQ9H714 662 aa14.27□□□□□ -0.12
SPAST-201ENST00000315285 ZC3H4Q9UPT8 1303 aaKnown RBP14.27□□□□□ -0.13
SPAST-201ENST00000315285 TRPC5OSA6NMA1 111 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 SUPT3HB4E1H0 165 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 SUPT3HO75486 399 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 PYGLP06737 847 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 HNRNPH3P31942 346 aaKnown RBP14.27□□□□□ -0.13
SPAST-201ENST00000315285 PBX1P40424 430 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 SERPINB8P50452 374 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 SPDYCQ5MJ68 293 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 DACT2Q5SW24 774 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 LAYNQ6UX15 382 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 SH3GL3Q99963 347 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 DCLRE1BQ9H816 532 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 LRRC40Q9H9A6 602 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 TIMM44O43615 452 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 MYBL2P10244 700 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 KIZQ2M2Z5 673 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 GLB1LQ6UWU2 654 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 KAT5Q92993 513 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 MKL1Q969V6 931 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 EIF2AQ9BY44 585 aaKnown RBP14.27□□□□□ -0.13
SPAST-201ENST00000315285 TAS2R14Q9NYV8 317 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 ASTN1O14525 1302 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 MEIS2O14770 477 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 TTC23LQ6PF05 361 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 DNERQ8NFT8 737 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 GANCQ8TET4 914 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 CPB2Q96IY4 423 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 CHST7Q9NS84 486 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 USP20Q9Y2K6 914 aa14.27□□□□□ -0.13
SPAST-201ENST00000315285 VWA5AO00534 786 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 CNTFP26441 200 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 HOXA10P31260 410 aaPredicted RBP14.26□□□□□ -0.13
SPAST-201ENST00000315285 AMPD2Q01433 879 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 EVX2Q03828 476 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 PPATQ06203 517 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 BMPR2Q13873 1038 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 RASA2Q15283 850 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 LATS2Q9NRM7 1088 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 PCDHGB4Q9UN71 923 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 DNAJC16Q9Y2G8 782 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 A0A087WZ62 844 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 ANKRD63C9JTQ0 380 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 ZNF197O14709 1029 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 CETPP11597 493 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 PTPN4P29074 926 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 ELK3P41970 407 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 SCUBE1Q8IWY4 988 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 FDXACB1Q9BRP7 624 aaPredicted RBP14.26□□□□□ -0.13
SPAST-201ENST00000315285 ADNPQ9H2P0 1102 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 CYP3A7-CYP3A51PA0A087WV96 503 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 CYP3A7P24462 503 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 DLG4P78352 724 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 C15orf52Q6ZUT6 534 aaKnown RBP14.26□□□□□ -0.13
SPAST-201ENST00000315285 CHSY1Q86X52 802 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 SLC16A10Q8TF71 515 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 TNFRSF25Q93038 417 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 ZNF512Q96ME7 567 aaPredicted RBP14.26□□□□□ -0.13
SPAST-201ENST00000315285 ZNF212Q9UDV6 495 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 PSMD10O75832 226 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 ATP6V1G2O95670 118 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 ETFBP38117 255 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 DENND1BQ6P3S1 775 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 SEPT5Q99719 369 aaPredicted RBP14.26□□□□□ -0.13
SPAST-201ENST00000315285 GID8Q9NWU2 228 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 DNPEPQ9ULA0 475 aa14.26□□□□□ -0.13
SPAST-201ENST00000315285 REXO2Q9Y3B8 237 aaKnown RBP14.26□□□□□ -0.13
SPAST-201ENST00000315285 hCG_2014768A0A024R1R8 64 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 F9P00740 461 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 HSPA1AP0DMV8 641 aaKnown RBP14.25□□□□□ -0.13
SPAST-201ENST00000315285 HSPA1BP0DMV9 641 aaKnown RBP14.25□□□□□ -0.13
SPAST-201ENST00000315285 DSG3P32926 999 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 GEMP55040 296 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 DSG1Q02413 1049 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 STX5Q13190 355 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 SPDYAQ5MJ70 313 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 TMEM139Q8IV31 216 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 MSL3Q8N5Y2 521 aaKnown RBP14.25□□□□□ -0.13
SPAST-201ENST00000315285 RFWD2Q8NHY2 731 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms