RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 PGM1P36871 562 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 ZNF200P98182 395 aaPredicted RBP14.04□□□□□ -0.16
SKA3-202ENST00000314759 HSF5Q4G112 596 aaPredicted RBP14.04□□□□□ -0.16
SKA3-202ENST00000314759 FAM182AQ5T1J6 154 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 SLFN12LQ6IEE8 588 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 CDHR3Q6ZTQ4 885 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 PDCD7Q8N8D1 485 aaKnown RBP14.04□□□□□ -0.16
SKA3-202ENST00000314759 TTC13Q8NBP0 860 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 ZNF184Q99676 751 aaPredicted RBP14.04□□□□□ -0.16
SKA3-202ENST00000314759 SLC9A2Q9UBY0 812 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 TJP2Q9UDY2 1190 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 RIPK3Q9Y572 518 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 LRRIQ4A6NIV6 560 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 DKC1O60832 514 aaKnown RBP eCLIP14.03□□□□□ -0.16
SKA3-202ENST00000314759 LDHAP00338 332 aaKnown RBP14.03□□□□□ -0.16
SKA3-202ENST00000314759 PIGRP01833 764 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 ABCD1P33897 745 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 RANBP1P43487 201 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 DPYSL3Q14195 570 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 SYCP2LQ5T4T6 812 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 RSBN1LQ6PCB5 846 aaPredicted RBP14.03□□□□□ -0.16
SKA3-202ENST00000314759 JOSD2Q8TAC2 188 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 TUBGCP5Q96RT8 1024 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 IMPG2Q9BZV3 1241 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 ZNF518BQ9C0D4 1074 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 CISHQ9NSE2 258 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 ZBTB12Q9Y330 459 aaPredicted RBP14.03□□□□□ -0.16
SKA3-202ENST00000314759 IKBKGQ9Y6K9 419 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 ADGRA2Q96PE1 1338 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 ARID2Q68CP9 1835 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 KBTBD13C9JR72 458 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 RAD17O75943 681 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 IL1BP01584 269 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 LYNP07948 512 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 INHBAP08476 426 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 HARSP12081 509 aaKnown RBP14.03□□□□□ -0.16
SKA3-202ENST00000314759 TSHRP16473 764 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 CCND2P30279 289 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 ACTR2P61160 394 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 TAZQ16635 292 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 CNPY1Q3B7I2 92 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 STYK1Q6J9G0 422 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 PPFIBP2Q8ND30 876 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 LPAR1Q92633 364 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 FRMD8P1Q9BZ68 369 aaPredicted RBP14.03□□□□□ -0.16
SKA3-202ENST00000314759 JPH1Q9HDC5 661 aaPredicted RBP14.03□□□□□ -0.16
SKA3-202ENST00000314759 ZNF212Q9UDV6 495 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 POLIQ9UNA4 740 aa14.03□□□□□ -0.16
SKA3-202ENST00000314759 SCAF8Q9UPN6 1271 aaKnown RBP14.03□□□□□ -0.16
SKA3-202ENST00000314759 B2RBV5 119 aa14.02□□□□□ -0.16
SKA3-202ENST00000314759 STAM2O75886 525 aa14.02□□□□□ -0.16
SKA3-202ENST00000314759 FAM155BO75949 473 aa14.02□□□□□ -0.16
SKA3-202ENST00000314759 WEE2P0C1S8 567 aa14.02□□□□□ -0.16
SKA3-202ENST00000314759 EIF4BP23588 611 aaKnown RBP14.02□□□□□ -0.16
SKA3-202ENST00000314759 MYL6P60660 151 aa14.02□□□□□ -0.16
SKA3-202ENST00000314759 FAM91A1Q658Y4 838 aa14.02□□□□□ -0.16
SKA3-202ENST00000314759 ABHD15Q6UXT9 468 aa14.02□□□□□ -0.16
SKA3-202ENST00000314759 TREML1Q86YW5 311 aa14.02□□□□□ -0.16
SKA3-202ENST00000314759 WNK4Q96J92 1243 aa14.02□□□□□ -0.16
SKA3-202ENST00000314759 PGAP2Q9UHJ9 254 aa14.02□□□□□ -0.16
SKA3-202ENST00000314759 TEX264Q9Y6I9 313 aa14.02□□□□□ -0.16
SKA3-202ENST00000314759 CAPN14A8MX76 684 aa14.02□□□□□ -0.17
SKA3-202ENST00000314759 A8MXQ7 604 aa14.02□□□□□ -0.17
SKA3-202ENST00000314759 H3BRJ5 948 aa14.02□□□□□ -0.17
SKA3-202ENST00000314759 MAFGO15525 162 aa14.02□□□□□ -0.17
SKA3-202ENST00000314759 AVILO75366 819 aa14.02□□□□□ -0.17
SKA3-202ENST00000314759 KRT7P08729 469 aa14.02□□□□□ -0.17
SKA3-202ENST00000314759 KRT3P12035 628 aa14.02□□□□□ -0.17
SKA3-202ENST00000314759 ETS2P15036 469 aa14.02□□□□□ -0.17
SKA3-202ENST00000314759 CDH5P33151 784 aaPredicted RBP14.02□□□□□ -0.17
SKA3-202ENST00000314759 RAP1GDS1P52306 607 aa14.02□□□□□ -0.17
SKA3-202ENST00000314759 EIF3EP60228 445 aaKnown RBP14.02□□□□□ -0.17
SKA3-202ENST00000314759 TGFB2P61812 414 aa14.02□□□□□ -0.17
SKA3-202ENST00000314759 TAF5Q15542 800 aa14.02□□□□□ -0.17
SKA3-202ENST00000314759 PTPN20Q4JDL3 420 aa14.02□□□□□ -0.17
SKA3-202ENST00000314759 PRPF39Q86UA1 669 aaKnown RBP14.02□□□□□ -0.17
SKA3-202ENST00000314759 DEPTORQ8TB45 409 aa14.02□□□□□ -0.17
SKA3-202ENST00000314759 SRPK1Q96SB4 655 aaKnown RBP14.02□□□□□ -0.17
SKA3-202ENST00000314759 GMLQ99445 158 aa14.02□□□□□ -0.17
SKA3-202ENST00000314759 MECRQ9BV79 373 aa14.02□□□□□ -0.17
SKA3-202ENST00000314759 KLF11O14901 512 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 RBP3P10745 1247 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 TNFSF9P41273 254 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 YWHAGP61981 247 aaKnown RBP eCLIP14.01□□□□□ -0.17
SKA3-202ENST00000314759 XKR3Q5GH77 459 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 RASIP1Q5U651 963 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 THNSL1Q8IYQ7 743 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 AZIN2Q96A70 460 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 CLPTM1LQ96KA5 538 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 FAM161BQ96MY7 647 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 MTMR12Q9C0I1 747 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 PORCNQ9H237 461 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 PCSK1NQ9UHG2 260 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 CYTH4Q9UIA0 394 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 TTLL13PA6NNM8 815 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 ENO1P06733 434 aaKnown RBP14.01□□□□□ -0.17
SKA3-202ENST00000314759 CES4AQ5XG92 561 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 XRRA1Q6P2D8 792 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 DENND1BQ6P3S1 775 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 IZUMO2Q6UXV1 221 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms