RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 DERAQ9Y315 318 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 COL2A1P02458 1487 aaPredicted RBP8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 FRMPD4Q14CM0 1322 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 PCYT1AP49585 367 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 CRYBB1P53674 252 aaPredicted RBP8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 POLR2LP62875 67 aaKnown RBP8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 CUL2Q13617 745 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 RNF135Q8IUD6 432 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 DIS3LQ8TF46 1054 aaKnown RBP8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 SLC20A1Q8WUM9 679 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 SLC4A9Q96Q91 983 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 CGRRF1Q99675 332 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 SCUBE2Q9NQ36 999 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 MRPL17Q9NRX2 175 aaKnown RBP8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 SMCHD1A6NHR9 2005 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 CYB561D2O14569 222 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 ERVK-10P10266 1014 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 C4BPBP20851 252 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 AP2B1P63010 937 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 TGM3Q08188 693 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 KIZQ2M2Z5 673 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 EFL1Q7Z2Z2 1120 aaKnown RBP8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 PRUNE1Q86TP1 453 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 BCL2L12Q9HB09 334 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 NAGPAQ9UK23 515 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 PCDHB5Q9Y5E4 795 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 TJP1Q07157 1748 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 A0A087WUV0 522 aaPredicted RBP8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 OPLAHO14841 1288 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 TADA3O75528 432 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 HLA-DRAP01903 254 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 ACADMP11310 421 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 HPGDP15428 266 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 RUNX1T1Q06455 604 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 LRRC23Q53EV4 343 aaPredicted RBP8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 C10orf120Q5SQS8 335 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 IL31Q6EBC2 164 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 SNX31Q8N9S9 440 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 SYBUQ9NX95 663 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 STMN3Q9NZ72 180 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 DNPEPQ9ULA0 475 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 KLRG2A4D1S0 409 aaPredicted RBP8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 NFIBO00712 420 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 ANTXR2P58335 489 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 FIBCD1Q8N539 461 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 CSGALNACT1Q8TDX6 532 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 ACSF2Q96CM8 615 aaPredicted RBP8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 KBTBD4Q9NVX7 518 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 BLOC1S6Q9UL45 172 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 CROCCQ5TZA2 2017 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 MYO7AQ13402 2215 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 A0A0G2JND7 137 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 ACSL3O95573 720 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 PFKMP08237 780 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 NUP62P37198 522 aaPredicted RBP8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 TTLL9Q3SXZ7 439 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 PLA2G4FQ68DD2 849 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 PSRC1Q6PGN9 363 aaPredicted RBP8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 SMIM5Q71RC9 77 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 EPM2AIP1Q7L775 607 aaPredicted RBP8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 GRAMD1CQ8IYS0 662 aa8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 BARX2Q9UMQ3 279 aaPredicted RBP8.64□□□□□ -1.03
PCDHB1-201ENST00000306549 RASA4BC9J798 803 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 SEPT4O43236 478 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 RASA4O43374 803 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 CCDC159P0C7I6 412 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 BRD2P25440 801 aaKnown RBP8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 GRK3P35626 688 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 SLCO1A2P46721 670 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 SULT1E1P49888 294 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 RARS2Q5T160 578 aaKnown RBP8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 PTRHD1Q6GMV3 140 aaKnown RBP8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 OVOS1Q6IE37 1185 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 SHC4Q6S5L8 630 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 C10orf53Q8N6V4 93 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 RBBP8NLQ8NC74 664 aaPredicted RBP8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 ARHGEF26Q96DR7 871 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 COPS7BQ9H9Q2 264 aaPredicted RBP8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 PKD2L2Q9NZM6 624 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 TSR3Q9UJK0 312 aaKnown RBP8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 GIT1Q9Y2X7 761 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 Q9Y3F1 56 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 FHOD1Q9Y613 1164 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 C4AP0C0L4 1744 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 SRGAP2O75044 1071 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 FYNP06241 537 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 EPB42P16452 691 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 TYK2P29597 1187 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 NPTX2P47972 431 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 RHBDL3P58872 404 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 ANGPT1Q15389 498 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 C11orf57Q6ZUT1 292 aaPredicted RBP8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 CCNJLQ8IV13 435 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 MMGT1Q8N4V1 131 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 ATL2Q8NHH9 583 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 FAXDC2Q96IV6 333 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 ADGRE3Q9BY15 652 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 MRPS26Q9BYN8 205 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms