RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 METTL14Q9HCE5 456 aaKnown RBP28.04■■■□□ 2.08
CDKN2A-201ENST00000304494 COMMD8Q9NX08 183 aa28.04■■■□□ 2.08
CDKN2A-201ENST00000304494 KIF26AQ9ULI4 1882 aaPredicted RBP28.04■■■□□ 2.08
CDKN2A-201ENST00000304494 ABL1P00519 1130 aa28.03■■■□□ 2.08
CDKN2A-201ENST00000304494 TCF3P15923 654 aa28.03■■■□□ 2.08
CDKN2A-201ENST00000304494 CD44P16070 742 aaKnown RBP28.03■■■□□ 2.08
CDKN2A-201ENST00000304494 CD58P19256 250 aa28.03■■■□□ 2.08
CDKN2A-201ENST00000304494 AMPD2Q01433 879 aa28.03■■■□□ 2.08
CDKN2A-201ENST00000304494 MORC3Q14149 939 aa28.03■■■□□ 2.08
CDKN2A-201ENST00000304494 ZNF528Q3MIS6 628 aa28.03■■■□□ 2.08
CDKN2A-201ENST00000304494 MAML2Q8IZL2 1156 aaPredicted RBP28.03■■■□□ 2.08
CDKN2A-201ENST00000304494 C12orf29Q8N999 325 aa28.03■■■□□ 2.08
CDKN2A-201ENST00000304494 RIN3Q8TB24 985 aa28.03■■■□□ 2.08
CDKN2A-201ENST00000304494 SEMA4DQ92854 862 aa28.03■■■□□ 2.08
CDKN2A-201ENST00000304494 EBF3Q9H4W6 596 aa28.03■■■□□ 2.08
CDKN2A-201ENST00000304494 FAM124BQ9H5Z6 455 aaPredicted RBP28.03■■■□□ 2.08
CDKN2A-201ENST00000304494 CSNK1G1Q9HCP0 422 aa28.03■■■□□ 2.08
CDKN2A-201ENST00000304494 FAM49BQ9NUQ9 324 aa28.03■■■□□ 2.08
CDKN2A-201ENST00000304494 USP34Q70CQ2 3546 aa28.03■■■□□ 2.08
CDKN2A-201ENST00000304494 PIEZO1Q92508 2521 aa28.02■■■□□ 2.08
CDKN2A-201ENST00000304494 BICDL2A1A5D9 508 aa28.02■■■□□ 2.08
CDKN2A-201ENST00000304494 TNFRSF10BO14763 440 aa28.02■■■□□ 2.08
CDKN2A-201ENST00000304494 GFRA3O60609 400 aa28.02■■■□□ 2.08
CDKN2A-201ENST00000304494 CILPO75339 1184 aa28.02■■■□□ 2.08
CDKN2A-201ENST00000304494 CHRNB1P11230 501 aa28.02■■■□□ 2.08
CDKN2A-201ENST00000304494 SLC5A3P53794 718 aa28.02■■■□□ 2.08
CDKN2A-201ENST00000304494 FOXR2Q6PJQ5 311 aa28.02■■■□□ 2.08
CDKN2A-201ENST00000304494 TTC16Q8NEE8 873 aa28.02■■■□□ 2.08
CDKN2A-201ENST00000304494 SH3RF2Q8TEC5 729 aa28.02■■■□□ 2.08
CDKN2A-201ENST00000304494 NKD2Q969F2 451 aaPredicted RBP28.02■■■□□ 2.08
CDKN2A-201ENST00000304494 FBXO32Q969P5 355 aa28.02■■■□□ 2.08
CDKN2A-201ENST00000304494 TWNKQ96RR1 684 aa28.02■■■□□ 2.08
CDKN2A-201ENST00000304494 HPS4Q9NQG7 708 aa28.02■■■□□ 2.08
CDKN2A-201ENST00000304494 DUS2Q9NX74 493 aaKnown RBP28.02■■■□□ 2.08
CDKN2A-201ENST00000304494 DMDP11532 3685 aa28.02■■■□□ 2.08
CDKN2A-201ENST00000304494 ZNF638Q14966 1978 aaKnown RBP28.01■■■□□ 2.07
CDKN2A-201ENST00000304494 FAM200BP0CF97 657 aa28.01■■■□□ 2.07
CDKN2A-201ENST00000304494 MTAPQ13126 283 aa28.01■■■□□ 2.07
CDKN2A-201ENST00000304494 CBWD6Q4V339 395 aa28.01■■■□□ 2.07
CDKN2A-201ENST00000304494 CBWD3Q5JTY5 395 aa28.01■■■□□ 2.07
CDKN2A-201ENST00000304494 DGKKQ5KSL6 1271 aa28.01■■■□□ 2.07
CDKN2A-201ENST00000304494 CBWD5Q5RIA9 395 aa28.01■■■□□ 2.07
CDKN2A-201ENST00000304494 TRIM68Q6AZZ1 485 aa28.01■■■□□ 2.07
CDKN2A-201ENST00000304494 KLHL10Q6JEL2 608 aa28.01■■■□□ 2.07
CDKN2A-201ENST00000304494 TXNDC11Q6PKC3 985 aa28.01■■■□□ 2.07
CDKN2A-201ENST00000304494 FILIP1Q7Z7B0 1213 aa28.01■■■□□ 2.07
CDKN2A-201ENST00000304494 OSCP1Q8WVF1 389 aa28.01■■■□□ 2.07
CDKN2A-201ENST00000304494 ATP2A3Q93084 1043 aa28.01■■■□□ 2.07
CDKN2A-201ENST00000304494 CYFIP2Q96F07 1278 aa28.01■■■□□ 2.07
CDKN2A-201ENST00000304494 HNRNPABQ99729 332 aaKnown RBP28.01■■■□□ 2.07
CDKN2A-201ENST00000304494 SMOQ99835 787 aa28.01■■■□□ 2.07
CDKN2A-201ENST00000304494 SEMA4AQ9H3S1 761 aa28.01■■■□□ 2.07
CDKN2A-201ENST00000304494 COQ4Q9Y3A0 265 aa28.01■■■□□ 2.07
CDKN2A-201ENST00000304494 PATJQ8NI35 1801 aa28.01■■■□□ 2.07
CDKN2A-201ENST00000304494 ANAPC1Q9H1A4 1944 aa28■■■□□ 2.07
CDKN2A-201ENST00000304494 PPP1R3GB7ZBB8 358 aa28■■■□□ 2.07
CDKN2A-201ENST00000304494 BIN1O00499 593 aa28■■■□□ 2.07
CDKN2A-201ENST00000304494 OLFM2O95897 454 aa28■■■□□ 2.07
CDKN2A-201ENST00000304494 OAS1P00973 400 aaKnown RBP28■■■□□ 2.07
CDKN2A-201ENST00000304494 BMP6P22004 513 aa28■■■□□ 2.07
CDKN2A-201ENST00000304494 ADORA2BP29275 332 aa28■■■□□ 2.07
CDKN2A-201ENST00000304494 IFNAR2P48551 515 aa28■■■□□ 2.07
CDKN2A-201ENST00000304494 MAP3K7CLP57077 242 aa28■■■□□ 2.07
CDKN2A-201ENST00000304494 SLC7A9P82251 487 aa28■■■□□ 2.07
CDKN2A-201ENST00000304494 PPP2R5DQ14738 602 aa28■■■□□ 2.07
CDKN2A-201ENST00000304494 MAMSTRQ6ZN01 415 aa28■■■□□ 2.07
CDKN2A-201ENST00000304494 CPA6Q8N4T0 437 aa28■■■□□ 2.07
CDKN2A-201ENST00000304494 SCAMP5Q8TAC9 235 aa28■■■□□ 2.07
CDKN2A-201ENST00000304494 WHAMMQ8TF30 809 aa28■■■□□ 2.07
CDKN2A-201ENST00000304494 NELFBQ8WX92 580 aa28■■■□□ 2.07
CDKN2A-201ENST00000304494 SLC35C1Q96A29 364 aa28■■■□□ 2.07
CDKN2A-201ENST00000304494 FBXO44Q9H4M3 255 aa28■■■□□ 2.07
CDKN2A-201ENST00000304494 IL37Q9NZH6 218 aa28■■■□□ 2.07
CDKN2A-201ENST00000304494 ARSAP15289 507 aa27.99■■■□□ 2.07
CDKN2A-201ENST00000304494 CSTF1Q05048 431 aaKnown RBP27.99■■■□□ 2.07
CDKN2A-201ENST00000304494 PON2Q15165 354 aa27.99■■■□□ 2.07
CDKN2A-201ENST00000304494 CCDC40Q4G0X9 1142 aa27.99■■■□□ 2.07
CDKN2A-201ENST00000304494 TTI2Q6NXR4 508 aa27.99■■■□□ 2.07
CDKN2A-201ENST00000304494 KIAA1958Q8N8K9 716 aa27.99■■■□□ 2.07
CDKN2A-201ENST00000304494 TRIML1Q8N9V2 468 aa27.99■■■□□ 2.07
CDKN2A-201ENST00000304494 ZMIZ2Q8NF64 920 aa27.99■■■□□ 2.07
CDKN2A-201ENST00000304494 EXOC4Q96A65 974 aa27.99■■■□□ 2.07
CDKN2A-201ENST00000304494 PRMT8Q9NR22 394 aaPredicted RBP27.99■■■□□ 2.07
CDKN2A-201ENST00000304494 CISHQ9NSE2 258 aa27.99■■■□□ 2.07
CDKN2A-201ENST00000304494 FAM92AA1XBS5 289 aa27.98■■■□□ 2.07
CDKN2A-201ENST00000304494 LEFTY2O00292 366 aa27.98■■■□□ 2.07
CDKN2A-201ENST00000304494 BEST1O76090 585 aa27.98■■■□□ 2.07
CDKN2A-201ENST00000304494 CCR3P51677 355 aa27.98■■■□□ 2.07
CDKN2A-201ENST00000304494 SNX30Q5VWJ9 437 aa27.98■■■□□ 2.07
CDKN2A-201ENST00000304494 DUSP9Q99956 384 aaKnown RBP27.98■■■□□ 2.07
CDKN2A-201ENST00000304494 RNF38Q9H0F5 515 aa27.98■■■□□ 2.07
CDKN2A-201ENST00000304494 PNPLA8Q9NP80 782 aa27.98■■■□□ 2.07
CDKN2A-201ENST00000304494 CTNND2Q9UQB3 1225 aa27.98■■■□□ 2.07
CDKN2A-201ENST00000304494 WNT6Q9Y6F9 365 aa27.98■■■□□ 2.07
CDKN2A-201ENST00000304494 VPS13AQ96RL7 3174 aa27.97■■■□□ 2.07
CDKN2A-201ENST00000304494 PRR23AA6NEV1 266 aa27.97■■■□□ 2.07
CDKN2A-201ENST00000304494 TUBP50607 506 aa27.97■■■□□ 2.07
CDKN2A-201ENST00000304494 PAK1Q13153 545 aa27.97■■■□□ 2.07
CDKN2A-201ENST00000304494 ZNF394Q53GI3 561 aa27.97■■■□□ 2.07
CDKN2A-201ENST00000304494 CLEC20AQ6ZU45 233 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms