RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 TFDP2Q14188 446 aa20.34■□□□□ 0.85
HOXC4-201ENST00000303406 TRIP13Q15645 432 aaPredicted RBP20.34■□□□□ 0.85
HOXC4-201ENST00000303406 SMTNL2Q2TAL5 461 aa20.34■□□□□ 0.85
HOXC4-201ENST00000303406 FAM47CQ5HY64 1035 aa20.34■□□□□ 0.85
HOXC4-201ENST00000303406 MAP7D3Q8IWC1 876 aa20.34■□□□□ 0.85
HOXC4-201ENST00000303406 TMEM86AQ8N2M4 240 aa20.34■□□□□ 0.85
HOXC4-201ENST00000303406 ZCCHC9Q8N567 271 aaKnown RBP20.34■□□□□ 0.85
HOXC4-201ENST00000303406 PEBP4Q96S96 227 aa20.34■□□□□ 0.85
HOXC4-201ENST00000303406 STMN4Q9H169 189 aaPredicted RBP20.34■□□□□ 0.85
HOXC4-201ENST00000303406 PCSK1NQ9UHG2 260 aa20.34■□□□□ 0.85
HOXC4-201ENST00000303406 SMAPO00193 183 aa20.33■□□□□ 0.85
HOXC4-201ENST00000303406 GABRDO14764 452 aa20.33■□□□□ 0.85
HOXC4-201ENST00000303406 XPO1O14980 1071 aaKnown RBP20.33■□□□□ 0.85
HOXC4-201ENST00000303406 MDM4O15151 490 aa20.33■□□□□ 0.85
HOXC4-201ENST00000303406 ZNF623O75123 536 aa20.33■□□□□ 0.85
HOXC4-201ENST00000303406 SHBGP04278 402 aa20.33■□□□□ 0.85
HOXC4-201ENST00000303406 PAX3P23760 479 aa20.33■□□□□ 0.85
HOXC4-201ENST00000303406 CHKAP35790 457 aa20.33■□□□□ 0.85
HOXC4-201ENST00000303406 GNGT1P63211 74 aa20.33■□□□□ 0.85
HOXC4-201ENST00000303406 OTUD4Q01804 1114 aaKnown RBP20.33■□□□□ 0.85
HOXC4-201ENST00000303406 NOGQ13253 232 aa20.33■□□□□ 0.85
HOXC4-201ENST00000303406 MORF4L2Q15014 288 aa20.33■□□□□ 0.85
HOXC4-201ENST00000303406 KCNT1Q5JUK3 1230 aa20.33■□□□□ 0.85
HOXC4-201ENST00000303406 MFSD5Q6N075 450 aa20.33■□□□□ 0.85
HOXC4-201ENST00000303406 LRRC31Q6UY01 552 aa20.33■□□□□ 0.85
HOXC4-201ENST00000303406 PCGF5Q86SE9 256 aa20.33■□□□□ 0.85
HOXC4-201ENST00000303406 PCSK9Q8NBP7 692 aaKnown RBP20.33■□□□□ 0.85
HOXC4-201ENST00000303406 SPATA18Q8TC71 538 aa20.33■□□□□ 0.85
HOXC4-201ENST00000303406 ACTL9Q8TC94 416 aa20.33■□□□□ 0.85
HOXC4-201ENST00000303406 PIWIL1Q96J94 861 aaKnown RBP20.33■□□□□ 0.85
HOXC4-201ENST00000303406 C11orf84Q9BUA3 381 aaPredicted RBP20.33■□□□□ 0.85
HOXC4-201ENST00000303406 TSPYL2Q9H2G4 693 aaPredicted RBP20.33■□□□□ 0.85
HOXC4-201ENST00000303406 GOLGA2P5Q9HBQ8 144 aa20.33■□□□□ 0.85
HOXC4-201ENST00000303406 TPX2Q9ULW0 747 aaKnown RBP20.33■□□□□ 0.85
HOXC4-201ENST00000303406 GRIN2DO15399 1336 aa20.33■□□□□ 0.85
HOXC4-201ENST00000303406 TCEA3O75764 348 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 GABBR2O75899 941 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 CABYRO75952 493 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 TTC4O95801 387 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 AGTP01019 485 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 ASGR1P07306 291 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 LMO2P25791 158 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 RPL9P32969 192 aaKnown RBP20.32■□□□□ 0.84
HOXC4-201ENST00000303406 PPP2R2AP63151 447 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 ZSCAN26Q16670 478 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 P3H1Q32P28 736 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 TNFAIP8L3Q5GJ75 292 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 OSTM1Q86WC4 334 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 RFX6Q8HWS3 928 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 B3GALNT2Q8NCR0 500 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 CENPIQ92674 756 aaPredicted RBP20.32■□□□□ 0.84
HOXC4-201ENST00000303406 WNT8BQ93098 351 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 FAM118BQ9BPY3 351 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 CFHR5Q9BXR6 569 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 CNOT10Q9H9A5 744 aaKnown RBP20.32■□□□□ 0.84
HOXC4-201ENST00000303406 NOVA2Q9UNW9 492 aaKnown RBP20.32■□□□□ 0.84
HOXC4-201ENST00000303406 SHOC2Q9UQ13 582 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 SQORQ9Y6N5 450 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 ERICH4A6NGS2 130 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 CYB561D2O14569 222 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 THP07101 528 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 ABHD2P08910 425 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 PDGFRBP09619 1106 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 CCDC130P13994 396 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 RDXP35241 583 aaKnown RBP20.32■□□□□ 0.84
HOXC4-201ENST00000303406 MDH1P40925 334 aaKnown RBP20.32■□□□□ 0.84
HOXC4-201ENST00000303406 CDR1P51861 262 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 SLC8A3P57103 927 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 C15orf59Q2T9L4 293 aaPredicted RBP20.32■□□□□ 0.84
HOXC4-201ENST00000303406 FAM26DQ5JW98 314 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 CCDC25Q86WR0 208 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 GSTCDQ8NEC7 633 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 KCTD13Q8WZ19 329 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 HSPH1Q92598 858 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 ADAM7Q9H2U9 754 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 CENPHQ9H3R5 247 aa20.32■□□□□ 0.84
HOXC4-201ENST00000303406 THSD7BQ9C0I4 1608 aa20.31■□□□□ 0.84
HOXC4-201ENST00000303406 CAND2O75155 1236 aa20.31■□□□□ 0.84
HOXC4-201ENST00000303406 CD48P09326 243 aa20.31■□□□□ 0.84
HOXC4-201ENST00000303406 ADORA2BP29275 332 aa20.31■□□□□ 0.84
HOXC4-201ENST00000303406 LHX1P48742 406 aa20.31■□□□□ 0.84
HOXC4-201ENST00000303406 CDH6P55285 790 aa20.31■□□□□ 0.84
HOXC4-201ENST00000303406 PTK7Q13308 1070 aa20.31■□□□□ 0.84
HOXC4-201ENST00000303406 DPYSL3Q14195 570 aa20.31■□□□□ 0.84
HOXC4-201ENST00000303406 DSC3Q14574 896 aa20.31■□□□□ 0.84
HOXC4-201ENST00000303406 KCNA10Q16322 511 aa20.31■□□□□ 0.84
HOXC4-201ENST00000303406 EFHC1Q5JVL4 640 aa20.31■□□□□ 0.84
HOXC4-201ENST00000303406 SLC2A14Q8TDB8 520 aa20.31■□□□□ 0.84
HOXC4-201ENST00000303406 FAM172AQ8WUF8 416 aa20.31■□□□□ 0.84
HOXC4-201ENST00000303406 FAF2Q96CS3 445 aa20.31■□□□□ 0.84
HOXC4-201ENST00000303406 DDX23Q9BUQ8 820 aaKnown RBP20.31■□□□□ 0.84
HOXC4-201ENST00000303406 MAK16Q9BXY0 300 aaKnown RBP20.31■□□□□ 0.84
HOXC4-201ENST00000303406 DUSP16Q9BY84 665 aa20.31■□□□□ 0.84
HOXC4-201ENST00000303406 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.31■□□□□ 0.84
HOXC4-201ENST00000303406 RNF19AQ9NV58 838 aa20.31■□□□□ 0.84
HOXC4-201ENST00000303406 CWC15Q9P013 229 aaKnown RBP20.31■□□□□ 0.84
HOXC4-201ENST00000303406 SLC12A6Q9UHW9 1150 aa20.31■□□□□ 0.84
HOXC4-201ENST00000303406 PIK3R2O00459 728 aa20.3■□□□□ 0.84
HOXC4-201ENST00000303406 MCF2LO15068 1137 aa20.3■□□□□ 0.84
HOXC4-201ENST00000303406 SKIP12755 728 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms