RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 RFX6Q8HWS3 928 aa15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 ABI1Q8IZP0 508 aa15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 DEFB118Q96PH6 123 aa15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 HNRNPABQ99729 332 aaKnown RBP15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 NCAPGQ9BPX3 1015 aa15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 PAAF1Q9BRP4 392 aa15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 UNC93B1Q9H1C4 597 aa15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 OPA1O60313 960 aa15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 VPS41P49754 854 aa15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 TAF5Q15542 800 aa15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 TRIP13Q15645 432 aaPredicted RBP15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 ALS2CLQ60I27 953 aa15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 OLFML1Q6UWY5 402 aa15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 MAP7D3Q8IWC1 876 aa15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 UROC1Q96N76 676 aa15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 DUSP16Q9BY84 665 aa15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 PHF24Q9UPV7 400 aa15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 R3HDM2Q9Y2K5 976 aaKnown RBP15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 XPO1O14980 1071 aaKnown RBP15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 SELPP16109 830 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 NPR3P17342 541 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 PCK1P35558 622 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 GGCXP38435 758 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 ADCY8P40145 1251 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 PIGZQ86VD9 579 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 FAM172AQ8WUF8 416 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 HERPUD2Q9BSE4 406 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 RNF208Q9H0X6 261 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 KRT82Q9NSB4 513 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 CDH6P55285 790 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 SLC25A11Q02978 314 aaKnown RBP15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 DHX9Q08211 1270 aaKnown RBP15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 MTMR3Q13615 1198 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 TIGD5Q53EQ6 642 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 EFHC1Q5JVL4 640 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 SYDE1Q6ZW31 735 aaPredicted RBP15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 THEM5Q8N1Q8 247 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 C3orf58Q8NDZ4 430 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 FAM71BQ8TC56 605 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 FTHL17Q9BXU8 183 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 CYLDQ9NQC7 956 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 RGS18Q9NS28 235 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 hCG_1818297A0A087WSY0 165 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 TRUB2O95900 331 aaKnown RBP15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 EOMESO95936 686 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 ATF2P15336 505 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 IGFBP6P24592 240 aaPredicted RBP15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 IL1R2P27930 398 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 TKTP29401 623 aaKnown RBP15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 BRCC3P46736 316 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 MAP3K7CLP57077 242 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 ADIGQ0VDE8 80 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 FUKQ8N0W3 1084 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 TSEN2Q8NCE0 465 aaKnown RBP15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 VPS18Q9P253 973 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 CDH9Q9ULB4 789 aa15.2■□□□□ 0.02
SHCBP1-201ENST00000303383 GOLGA6L10A6NI86 522 aa15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 GABRDO14764 452 aa15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 AP1G2O75843 785 aa15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 KDELR1P24390 212 aa15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 DRG2P55039 364 aaKnown RBP15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 KLF1Q13351 362 aaPredicted RBP15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 LIMS2Q7Z4I7 341 aa15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 NEUROG2Q9H2A3 272 aa15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 DSEQ9UL01 958 aa15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 DNM1LO00429 736 aa15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 PQBP1O60828 265 aaKnown RBP15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 CDKN2BP42772 138 aa15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 RPL21P46778 160 aaKnown RBP15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 BYSLQ13895 437 aaKnown RBP15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 SH3PXD2AQ5TCZ1 1133 aa15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 SEZ6LQ9BYH1 1024 aa15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 ATP8A1Q9Y2Q0 1164 aa15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 H3BQF6 201 aa15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 CST8O60676 142 aa15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 CCDC142Q17RM4 750 aa15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 CCDC25Q86WR0 208 aa15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 ARFGAP1Q8N6T3 406 aa15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 CCDC89Q8N998 374 aa15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 SLC43A3Q8NBI5 491 aa15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 TTC13Q8NBP0 860 aa15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 CLEC4CQ8WTT0 213 aa15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 SEC14L1Q92503 715 aa15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 LRFN2Q9ULH4 789 aa15.19■□□□□ 0.02
SHCBP1-201ENST00000303383 CCDC14Q49A88 953 aa15.18■□□□□ 0.02
SHCBP1-201ENST00000303383 BOLA3Q53S33 107 aa15.18■□□□□ 0.02
SHCBP1-201ENST00000303383 NOMO2Q5JPE7 1267 aa15.18■□□□□ 0.02
SHCBP1-201ENST00000303383 DCLRE1AQ6PJP8 1040 aa15.18■□□□□ 0.02
SHCBP1-201ENST00000303383 SLC26A9Q7LBE3 791 aa15.18■□□□□ 0.02
SHCBP1-201ENST00000303383 FBXO25Q8TCJ0 367 aa15.18■□□□□ 0.02
SHCBP1-201ENST00000303383 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.18■□□□□ 0.02
SHCBP1-201ENST00000303383 CAPN9O14815 690 aa15.18■□□□□ 0.02
SHCBP1-201ENST00000303383 PAX3P23760 479 aa15.18■□□□□ 0.02
SHCBP1-201ENST00000303383 OR1G1P47890 313 aa15.18■□□□□ 0.02
SHCBP1-201ENST00000303383 TSPY1Q01534 308 aa15.18■□□□□ 0.02
SHCBP1-201ENST00000303383 MYBPHLA2RUH7 354 aa15.18■□□□□ 0.02
SHCBP1-201ENST00000303383 C9IYK1 514 aa15.18■□□□□ 0.02
SHCBP1-201ENST00000303383 RDXP35241 583 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms