RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 APPL2Q8NEU8 664 aa22.4■■□□□ 1.18
SMCO4-201ENST00000298966 SHKBP1Q8TBC3 707 aa22.4■■□□□ 1.18
SMCO4-201ENST00000298966 CCDC127Q96BQ5 260 aa22.4■■□□□ 1.18
SMCO4-201ENST00000298966 TSPAN18Q96SJ8 248 aa22.4■■□□□ 1.18
SMCO4-201ENST00000298966 BAG1Q99933 345 aaPredicted RBP22.4■■□□□ 1.18
SMCO4-201ENST00000298966 ASB7Q9H672 318 aa22.4■■□□□ 1.18
SMCO4-201ENST00000298966 RPF1Q9H9Y2 349 aaKnown RBP22.4■■□□□ 1.18
SMCO4-201ENST00000298966 KCND1Q9NSA2 647 aa22.4■■□□□ 1.18
SMCO4-201ENST00000298966 FAM207AQ9NSI2 230 aaPredicted RBP22.4■■□□□ 1.18
SMCO4-201ENST00000298966 SPECC1L-ADORA2AF8WAN1 911 aa22.39■■□□□ 1.17
SMCO4-201ENST00000298966 AXIN1O15169 862 aa22.39■■□□□ 1.17
SMCO4-201ENST00000298966 ARHGAP6O43182 974 aa22.39■■□□□ 1.17
SMCO4-201ENST00000298966 HNRNPH3P31942 346 aaKnown RBP22.39■■□□□ 1.17
SMCO4-201ENST00000298966 OSTNP61366 133 aa22.39■■□□□ 1.17
SMCO4-201ENST00000298966 DLG4P78352 724 aa22.39■■□□□ 1.17
SMCO4-201ENST00000298966 CDK17Q00537 523 aa22.39■■□□□ 1.17
SMCO4-201ENST00000298966 SF3A2Q15428 464 aaKnown RBP22.39■■□□□ 1.17
SMCO4-201ENST00000298966 CBWD6Q4V339 395 aa22.39■■□□□ 1.17
SMCO4-201ENST00000298966 CBWD3Q5JTY5 395 aa22.39■■□□□ 1.17
SMCO4-201ENST00000298966 CBWD5Q5RIA9 395 aa22.39■■□□□ 1.17
SMCO4-201ENST00000298966 ALKAL1Q6UXT8 129 aa22.39■■□□□ 1.17
SMCO4-201ENST00000298966 RALGPS2Q86X27 583 aaPredicted RBP22.39■■□□□ 1.17
SMCO4-201ENST00000298966 TMTC1Q8IUR5 882 aa22.39■■□□□ 1.17
SMCO4-201ENST00000298966 EHBP1Q8NDI1 1231 aa22.39■■□□□ 1.17
SMCO4-201ENST00000298966 PLEKHO2Q8TD55 490 aa22.39■■□□□ 1.17
SMCO4-201ENST00000298966 CPLX3Q8WVH0 158 aa22.39■■□□□ 1.17
SMCO4-201ENST00000298966 LOXL4Q96JB6 756 aa22.39■■□□□ 1.17
SMCO4-201ENST00000298966 SUSD3Q96L08 255 aa22.39■■□□□ 1.17
SMCO4-201ENST00000298966 ARRDC1-AS1Q9H2J1 176 aa22.39■■□□□ 1.17
SMCO4-201ENST00000298966 MYBPHLA2RUH7 354 aa22.38■■□□□ 1.17
SMCO4-201ENST00000298966 DLATP10515 647 aaKnown RBP22.38■■□□□ 1.17
SMCO4-201ENST00000298966 HARSP12081 509 aaKnown RBP22.38■■□□□ 1.17
SMCO4-201ENST00000298966 TNNI1P19237 187 aa22.38■■□□□ 1.17
SMCO4-201ENST00000298966 CTHP32929 405 aa22.38■■□□□ 1.17
SMCO4-201ENST00000298966 GCLMP48507 274 aa22.38■■□□□ 1.17
SMCO4-201ENST00000298966 GOLGA8FQ08AF8 430 aa22.38■■□□□ 1.17
SMCO4-201ENST00000298966 GOLGA8DPQ0D2H9 430 aa22.38■■□□□ 1.17
SMCO4-201ENST00000298966 FCHO2Q0JRZ9 810 aa22.38■■□□□ 1.17
SMCO4-201ENST00000298966 KLHDC7AQ5VTJ3 777 aa22.38■■□□□ 1.17
SMCO4-201ENST00000298966 FBXL13Q8NEE6 735 aa22.38■■□□□ 1.17
SMCO4-201ENST00000298966 RSPRY1Q96DX4 576 aa22.38■■□□□ 1.17
SMCO4-201ENST00000298966 ZMAT2Q96NC0 199 aaKnown RBP22.38■■□□□ 1.17
SMCO4-201ENST00000298966 CRACR2AQ9BSW2 395 aa22.38■■□□□ 1.17
SMCO4-201ENST00000298966 INTS2Q9H0H0 1204 aaKnown RBP22.38■■□□□ 1.17
SMCO4-201ENST00000298966 GANQ9H2C0 597 aa22.38■■□□□ 1.17
SMCO4-201ENST00000298966 PLEKHA5Q9HAU0 1116 aa22.38■■□□□ 1.17
SMCO4-201ENST00000298966 SPTLC3Q9NUV7 552 aa22.38■■□□□ 1.17
SMCO4-201ENST00000298966 YIPF1Q9Y548 306 aa22.38■■□□□ 1.17
SMCO4-201ENST00000298966 ZNF806P0C7X5 589 aa22.37■■□□□ 1.17
SMCO4-201ENST00000298966 UCHL3P15374 230 aa22.37■■□□□ 1.17
SMCO4-201ENST00000298966 KCNE1P15382 129 aa22.37■■□□□ 1.17
SMCO4-201ENST00000298966 KLK7P49862 253 aa22.37■■□□□ 1.17
SMCO4-201ENST00000298966 PLD1Q13393 1074 aa22.37■■□□□ 1.17
SMCO4-201ENST00000298966 ZACNQ401N2 412 aa22.37■■□□□ 1.17
SMCO4-201ENST00000298966 TXNDC11Q6PKC3 985 aa22.37■■□□□ 1.17
SMCO4-201ENST00000298966 RNF19BQ6ZMZ0 732 aa22.37■■□□□ 1.17
SMCO4-201ENST00000298966 SYNPOQ8N3V7 929 aa22.37■■□□□ 1.17
SMCO4-201ENST00000298966 ACAP3Q96P50 834 aa22.37■■□□□ 1.17
SMCO4-201ENST00000298966 APEX2Q9UBZ4 518 aa22.37■■□□□ 1.17
SMCO4-201ENST00000298966 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.37■■□□□ 1.17
SMCO4-201ENST00000298966 A0A1W2PRU2 124 aa22.36■■□□□ 1.17
SMCO4-201ENST00000298966 DPYSL4O14531 572 aa22.36■■□□□ 1.17
SMCO4-201ENST00000298966 TM4SF5O14894 197 aa22.36■■□□□ 1.17
SMCO4-201ENST00000298966 NOL4O94818 638 aa22.36■■□□□ 1.17
SMCO4-201ENST00000298966 SLC9A1P19634 815 aa22.36■■□□□ 1.17
SMCO4-201ENST00000298966 PON2Q15165 354 aa22.36■■□□□ 1.17
SMCO4-201ENST00000298966 CCDC6Q16204 474 aa22.36■■□□□ 1.17
SMCO4-201ENST00000298966 MEA1Q16626 185 aa22.36■■□□□ 1.17
SMCO4-201ENST00000298966 ARHGAP29Q52LW3 1261 aa22.36■■□□□ 1.17
SMCO4-201ENST00000298966 WDR44Q5JSH3 913 aa22.36■■□□□ 1.17
SMCO4-201ENST00000298966 STPG1Q5TH74 334 aa22.36■■□□□ 1.17
SMCO4-201ENST00000298966 SV2AQ7L0J3 742 aa22.36■■□□□ 1.17
SMCO4-201ENST00000298966 ARID3BQ8IVW6 561 aaPredicted RBP22.36■■□□□ 1.17
SMCO4-201ENST00000298966 TTC8Q8TAM2 541 aa22.36■■□□□ 1.17
SMCO4-201ENST00000298966 GAB3Q8WWW8 586 aa22.36■■□□□ 1.17
SMCO4-201ENST00000298966 PDE11AQ9HCR9 933 aa22.36■■□□□ 1.17
SMCO4-201ENST00000298966 C2orf42Q9NWW7 574 aa22.36■■□□□ 1.17
SMCO4-201ENST00000298966 RALYQ9UKM9 306 aaKnown RBP22.36■■□□□ 1.17
SMCO4-201ENST00000298966 DERAQ9Y315 318 aa22.36■■□□□ 1.17
SMCO4-201ENST00000298966 RNF225M0QZC1 329 aaPredicted RBP22.35■■□□□ 1.17
SMCO4-201ENST00000298966 CCP110O43303 1012 aa22.35■■□□□ 1.17
SMCO4-201ENST00000298966 EPN2O95208 641 aa22.35■■□□□ 1.17
SMCO4-201ENST00000298966 C4BPAP04003 597 aaKnown RBP22.35■■□□□ 1.17
SMCO4-201ENST00000298966 CCDC172P0C7W6 258 aa22.35■■□□□ 1.17
SMCO4-201ENST00000298966 EPHB3P54753 998 aa22.35■■□□□ 1.17
SMCO4-201ENST00000298966 POLR2FP61218 127 aaKnown RBP22.35■■□□□ 1.17
SMCO4-201ENST00000298966 DUOXA2Q1HG44 320 aa22.35■■□□□ 1.17
SMCO4-201ENST00000298966 DPY19L2P1Q6NXN4 242 aa22.35■■□□□ 1.17
SMCO4-201ENST00000298966 ENOSF1Q7L5Y1 443 aa22.35■■□□□ 1.17
SMCO4-201ENST00000298966 LMO3Q8TAP4 145 aa22.35■■□□□ 1.17
SMCO4-201ENST00000298966 BAP1Q92560 729 aa22.35■■□□□ 1.17
SMCO4-201ENST00000298966 C18orf25Q96B23 403 aaPredicted RBP22.35■■□□□ 1.17
SMCO4-201ENST00000298966 RRAGDQ9NQL2 400 aaPredicted RBP22.35■■□□□ 1.17
SMCO4-201ENST00000298966 RAB20Q9NX57 234 aa22.35■■□□□ 1.17
SMCO4-201ENST00000298966 CNTN3Q9P232 1028 aa22.35■■□□□ 1.17
SMCO4-201ENST00000298966 PCDHB8Q9UN66 801 aa22.35■■□□□ 1.17
SMCO4-201ENST00000298966 NUP210Q8TEM1 1887 aaPredicted RBP22.34■■□□□ 1.17
SMCO4-201ENST00000298966 RPP40O75818 363 aaKnown RBP22.34■■□□□ 1.17
SMCO4-201ENST00000298966 PROS1P07225 676 aa22.34■■□□□ 1.17
SMCO4-201ENST00000298966 CLCN1P35523 988 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms