RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 MAP4P27816 1152 aaKnown RBP16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 NAMPTP43490 491 aa16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 PCSK7Q16549 785 aa16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 DDX53Q86TM3 631 aaKnown RBP16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 PABPC5Q96DU9 382 aaKnown RBP16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 MRGBPQ9NV56 204 aa16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 PCDHB8Q9UN66 801 aa16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 PDHXO00330 501 aa16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 TM9SF1O15321 606 aa16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 KPNA6O60684 536 aa16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 B3GAT3O94766 335 aa16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 SLITRK3O94933 977 aa16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 HOXA10P31260 410 aaPredicted RBP16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 C6orf10Q5SRN2 563 aa16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 ILKAPQ9H0C8 392 aaPredicted RBP16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 NINJ2Q9NZG7 142 aa16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 AFF4Q9UHB7 1163 aaKnown RBP16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 XPO1O14980 1071 aaKnown RBP16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 ZCCHC18P0CG32 403 aa16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 C4orf19Q8IY42 314 aa16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 PGBD3Q8N328 593 aa16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 EIF1ADQ8N9N8 165 aaKnown RBP16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 GPATCH2LQ9NWQ4 482 aa16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 SOX11P35716 441 aa16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 GNL1P36915 607 aaPredicted RBP16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 IL17AQ16552 155 aa16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 ANO4Q32M45 955 aa16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 ABRAQ8N0Z2 381 aa16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 MSL3Q8N5Y2 521 aaKnown RBP16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 RNF217Q8TC41 542 aa16.63■□□□□ 0.25
ARHGEF28-201ENST00000296794 NKRFO15226 690 aaKnown RBP eCLIP16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 SLC12A3P55017 1021 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 VCPP55072 806 aaKnown RBP16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 OLFML2BQ68BL8 750 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 LRRC55Q6ZSA7 311 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 EMC1Q8N766 993 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 SGF29Q96ES7 293 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 PCDH9Q9HC56 1237 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 TMEM247A6NEH6 219 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 SH3KBP1Q96B97 665 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 PDCD2LQ9BRP1 358 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 SHOC2Q9UQ13 582 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 COL5A2P05997 1499 aaPredicted RBP16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 LSM8O95777 96 aaKnown RBP16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 KRT16P08779 473 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 TGM2P21980 687 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 CLCN3P51790 818 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 CBWD6Q4V339 395 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 ZCWPW2Q504Y3 356 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 CBWD3Q5JTY5 395 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 CBWD5Q5RIA9 395 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 NAPEPLDQ6IQ20 393 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 CCDC33Q8N5R6 958 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 DCDC2Q9UHG0 476 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 NFIBO00712 420 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 MTSS1O43312 755 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 AMPD2Q01433 879 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 DDR1Q08345 913 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 APLFQ8IW19 511 aaPredicted RBP16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 CD302Q8IX05 232 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 FUKQ8N0W3 1084 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 SLC25A41Q8N5S1 370 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 DNERQ8NFT8 737 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 AKT1S1Q96B36 256 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 ELMO3Q96BJ8 720 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 IL1RL2Q9HB29 575 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 AGO4Q9HCK5 861 aaKnown RBP16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 CISHQ9NSE2 258 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 TAGLN3Q9UI15 199 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 DNAJC16Q9Y2G8 782 aa16.62■□□□□ 0.25
ARHGEF28-201ENST00000296794 BAZ2BQ9UIF8 2168 aaKnown RBP16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 HMOX2P30519 316 aa16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 SOX10P56693 466 aa16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 C1QBPQ07021 282 aaKnown RBP16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 PDK2Q15119 407 aa16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 ZNF662Q6ZS27 426 aa16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 USP50Q70EL3 339 aaPredicted RBP16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 CLEC4FQ8N1N0 589 aa16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 CALML6Q8TD86 181 aa16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 SEPT8Q92599 483 aa16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 GEMIN8Q9NWZ8 242 aaKnown RBP16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 SHPRHQ149N8 1683 aa16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 DNALI1O14645 258 aaPredicted RBP16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 ESRRBO95718 433 aa16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 TGFB3P10600 412 aa16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 DSG3P32926 999 aa16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 FKBP1CQ5VVH2 108 aa16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 RFWD2Q8NHY2 731 aa16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 RUBCNLQ9H714 662 aa16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 DNAJC18Q9H819 358 aa16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 USP18Q9UMW8 372 aa16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 HSPA1AP0DMV8 641 aaKnown RBP16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 HSPA1BP0DMV9 641 aaKnown RBP16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 PRKCIP41743 596 aa16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 ATN1P54259 1190 aaPredicted RBP16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 MYL6P60660 151 aa16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 ITGB3BPQ13352 177 aaPredicted RBP16.61■□□□□ 0.25
ARHGEF28-201ENST00000296794 SPDYCQ5MJ68 293 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms