RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 PGFP49763 221 aa21■□□□□ 0.95
TIMP4-201ENST00000287814 PDE4CQ08493 712 aa21■□□□□ 0.95
TIMP4-201ENST00000287814 RAPGEF1Q13905 1077 aa21■□□□□ 0.95
TIMP4-201ENST00000287814 DRAP1Q14919 205 aaPredicted RBP21■□□□□ 0.95
TIMP4-201ENST00000287814 SLC44A3Q8N4M1 653 aa21■□□□□ 0.95
TIMP4-201ENST00000287814 GCNAQ96QF7 691 aa21■□□□□ 0.95
TIMP4-201ENST00000287814 ERGIC2Q96RQ1 377 aa21■□□□□ 0.95
TIMP4-201ENST00000287814 PLA2G2FQ9BZM2 168 aa21■□□□□ 0.95
TIMP4-201ENST00000287814 IGSF9Q9P2J2 1179 aa21■□□□□ 0.95
TIMP4-201ENST00000287814 WDR3Q9UNX4 943 aaKnown RBP eCLIP21■□□□□ 0.95
TIMP4-201ENST00000287814 NCANO14594 1321 aa21■□□□□ 0.95
TIMP4-201ENST00000287814 FAM92AA1XBS5 289 aa20.99■□□□□ 0.95
TIMP4-201ENST00000287814 CYP26A1O43174 497 aa20.99■□□□□ 0.95
TIMP4-201ENST00000287814 RTN3O95197 1032 aaPredicted RBP20.99■□□□□ 0.95
TIMP4-201ENST00000287814 CFHP08603 1231 aa20.99■□□□□ 0.95
TIMP4-201ENST00000287814 CLCN1P35523 988 aa20.99■□□□□ 0.95
TIMP4-201ENST00000287814 VIPR2P41587 438 aa20.99■□□□□ 0.95
TIMP4-201ENST00000287814 ARHGAP15Q53QZ3 475 aa20.99■□□□□ 0.95
TIMP4-201ENST00000287814 PIGZQ86VD9 579 aa20.99■□□□□ 0.95
TIMP4-201ENST00000287814 ARID3BQ8IVW6 561 aaPredicted RBP20.99■□□□□ 0.95
TIMP4-201ENST00000287814 MAB21L3Q8N8X9 362 aa20.99■□□□□ 0.95
TIMP4-201ENST00000287814 SMARCD2Q92925 531 aa20.99■□□□□ 0.95
TIMP4-201ENST00000287814 KXD1Q9BQD3 176 aa20.99■□□□□ 0.95
TIMP4-201ENST00000287814 PNPLA8Q9NP80 782 aa20.99■□□□□ 0.95
TIMP4-201ENST00000287814 CHORDC1Q9UHD1 332 aaPredicted RBP20.99■□□□□ 0.95
TIMP4-201ENST00000287814 C2orf78A6NCI8 922 aa20.99■□□□□ 0.95
TIMP4-201ENST00000287814 ZNF840PA6NDX5 716 aa20.99■□□□□ 0.95
TIMP4-201ENST00000287814 FAM71AQ8IYT1 594 aa20.99■□□□□ 0.95
TIMP4-201ENST00000287814 ZNF606Q8WXB4 792 aa20.99■□□□□ 0.95
TIMP4-201ENST00000287814 MRPS31Q92665 395 aaKnown RBP20.99■□□□□ 0.95
TIMP4-201ENST00000287814 RSPRY1Q96DX4 576 aa20.99■□□□□ 0.95
TIMP4-201ENST00000287814 SLC22A12Q96S37 553 aa20.99■□□□□ 0.95
TIMP4-201ENST00000287814 CYP2S1Q96SQ9 504 aa20.99■□□□□ 0.95
TIMP4-201ENST00000287814 SMG9Q9H0W8 520 aaKnown RBP20.99■□□□□ 0.95
TIMP4-201ENST00000287814 HESX1Q9UBX0 185 aa20.99■□□□□ 0.95
TIMP4-201ENST00000287814 CUL9Q8IWT3 2517 aa20.98■□□□□ 0.95
TIMP4-201ENST00000287814 A0A1B0GTH6 734 aa20.98■□□□□ 0.95
TIMP4-201ENST00000287814 KIF11P52732 1056 aa20.98■□□□□ 0.95
TIMP4-201ENST00000287814 BCAT1P54687 386 aa20.98■□□□□ 0.95
TIMP4-201ENST00000287814 ZNF445P59923 1031 aa20.98■□□□□ 0.95
TIMP4-201ENST00000287814 POLR2FP61218 127 aaKnown RBP20.98■□□□□ 0.95
TIMP4-201ENST00000287814 MON1AQ86VX9 555 aa20.98■□□□□ 0.95
TIMP4-201ENST00000287814 FBXO32Q969P5 355 aa20.98■□□□□ 0.95
TIMP4-201ENST00000287814 NXPE3Q969Y0 559 aa20.98■□□□□ 0.95
TIMP4-201ENST00000287814 LRRC3BQ96PB8 259 aa20.98■□□□□ 0.95
TIMP4-201ENST00000287814 STK33Q9BYT3 514 aa20.98■□□□□ 0.95
TIMP4-201ENST00000287814 UBXN6Q9BZV1 441 aa20.98■□□□□ 0.95
TIMP4-201ENST00000287814 TRPV4Q9HBA0 871 aa20.98■□□□□ 0.95
TIMP4-201ENST00000287814 EHD2Q9NZN4 543 aa20.98■□□□□ 0.95
TIMP4-201ENST00000287814 TRPM5Q9NZQ8 1165 aa20.98■□□□□ 0.95
TIMP4-201ENST00000287814 SORCS3Q9UPU3 1222 aa20.98■□□□□ 0.95
TIMP4-201ENST00000287814 MYH10P35580 1976 aa20.97■□□□□ 0.95
TIMP4-201ENST00000287814 GOLGA6L19H0YKK7 550 aa20.97■□□□□ 0.95
TIMP4-201ENST00000287814 NARSO43776 548 aaKnown RBP20.97■□□□□ 0.95
TIMP4-201ENST00000287814 GABBR2O75899 941 aa20.97■□□□□ 0.95
TIMP4-201ENST00000287814 PRAMEF12O95522 483 aa20.97■□□□□ 0.95
TIMP4-201ENST00000287814 GNA15P30679 374 aa20.97■□□□□ 0.95
TIMP4-201ENST00000287814 FANCCQ00597 558 aa20.97■□□□□ 0.95
TIMP4-201ENST00000287814 BST2Q10589 180 aaKnown RBP20.97■□□□□ 0.95
TIMP4-201ENST00000287814 TDGQ13569 410 aa20.97■□□□□ 0.95
TIMP4-201ENST00000287814 MTSS1LQ765P7 747 aa20.97■□□□□ 0.95
TIMP4-201ENST00000287814 SLC47A2Q86VL8 602 aa20.97■□□□□ 0.95
TIMP4-201ENST00000287814 CMTM8Q8IZV2 173 aa20.97■□□□□ 0.95
TIMP4-201ENST00000287814 PCMTD1Q96MG8 357 aaPredicted RBP20.97■□□□□ 0.95
TIMP4-201ENST00000287814 SLITRK1Q96PX8 696 aa20.97■□□□□ 0.95
TIMP4-201ENST00000287814 EPHX3Q9H6B9 360 aa20.97■□□□□ 0.95
TIMP4-201ENST00000287814 ZFP14Q9HCL3 533 aa20.97■□□□□ 0.95
TIMP4-201ENST00000287814 NLRC4Q9NPP4 1024 aa20.97■□□□□ 0.95
TIMP4-201ENST00000287814 COMMD8Q9NX08 183 aa20.97■□□□□ 0.95
TIMP4-201ENST00000287814 GMIPQ9P107 970 aa20.97■□□□□ 0.95
TIMP4-201ENST00000287814 USP3Q9Y6I4 520 aa20.97■□□□□ 0.95
TIMP4-201ENST00000287814 PI4K2BG5E9Z4 385 aa20.96■□□□□ 0.95
TIMP4-201ENST00000287814 M0QYV0 167 aa20.96■□□□□ 0.95
TIMP4-201ENST00000287814 XPO1O14980 1071 aaKnown RBP20.96■□□□□ 0.95
TIMP4-201ENST00000287814 THAP12O43422 761 aa20.96■□□□□ 0.95
TIMP4-201ENST00000287814 DCXO43602 365 aa20.96■□□□□ 0.95
TIMP4-201ENST00000287814 SERPINC1P01008 464 aa20.96■□□□□ 0.95
TIMP4-201ENST00000287814 RFX1P22670 979 aa20.96■□□□□ 0.95
TIMP4-201ENST00000287814 NR1I3Q14994 352 aa20.96■□□□□ 0.95
TIMP4-201ENST00000287814 RAB41Q5JT25 222 aa20.96■□□□□ 0.95
TIMP4-201ENST00000287814 DENND1BQ6P3S1 775 aa20.96■□□□□ 0.95
TIMP4-201ENST00000287814 RNF214Q8ND24 703 aa20.96■□□□□ 0.95
TIMP4-201ENST00000287814 SLC35F5Q8WV83 523 aa20.96■□□□□ 0.95
TIMP4-201ENST00000287814 SECISBP2LQ93073 1101 aaKnown RBP20.96■□□□□ 0.95
TIMP4-201ENST00000287814 ELSPBP1Q96BH3 223 aa20.96■□□□□ 0.95
TIMP4-201ENST00000287814 TRPC7Q9HCX4 862 aa20.96■□□□□ 0.95
TIMP4-201ENST00000287814 ZNF638Q14966 1978 aaKnown RBP20.96■□□□□ 0.95
TIMP4-201ENST00000287814 OBSL1O75147 1896 aa20.96■□□□□ 0.95
TIMP4-201ENST00000287814 F8VZ95 297 aa20.96■□□□□ 0.95
TIMP4-201ENST00000287814 ECI2O75521 394 aa20.96■□□□□ 0.95
TIMP4-201ENST00000287814 ABL1P00519 1130 aa20.96■□□□□ 0.95
TIMP4-201ENST00000287814 ZDHHC11BP0C7U3 371 aa20.96■□□□□ 0.95
TIMP4-201ENST00000287814 TPM4P67936 248 aa20.96■□□□□ 0.95
TIMP4-201ENST00000287814 STILQ15468 1287 aa20.96■□□□□ 0.95
TIMP4-201ENST00000287814 FILIP1LQ4L180 1135 aa20.96■□□□□ 0.95
TIMP4-201ENST00000287814 PMF1Q6P1K2 205 aa20.96■□□□□ 0.95
TIMP4-201ENST00000287814 VITQ6UXI7 678 aa20.96■□□□□ 0.95
TIMP4-201ENST00000287814 ARL14EPQ8N8R7 260 aaPredicted RBP20.96■□□□□ 0.95
TIMP4-201ENST00000287814 RNF38Q9H0F5 515 aa20.96■□□□□ 0.95
TIMP4-201ENST00000287814 FBXO44Q9H4M3 255 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms