RNA–Protein interactions for RNA: ENST00000287543.4

MALSU1-201, Transcript of mitochondrial assembly of ribosomal large subunit 1, humanhuman

TSL 2

Gene MALSU1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALSU1-201ENST00000287543 SYNPOQ8N3V7 929 aa20.06■□□□□ 0.8
MALSU1-201ENST00000287543 OSCP1Q8WVF1 389 aa20.06■□□□□ 0.8
MALSU1-201ENST00000287543 NELFBQ8WX92 580 aa20.06■□□□□ 0.8
MALSU1-201ENST00000287543 FBXO32Q969P5 355 aa20.06■□□□□ 0.8
MALSU1-201ENST00000287543 CYFIP2Q96F07 1278 aa20.06■□□□□ 0.8
MALSU1-201ENST00000287543 KCNK16Q96T55 309 aa20.06■□□□□ 0.8
MALSU1-201ENST00000287543 CHRDQ9H2X0 955 aa20.06■□□□□ 0.8
MALSU1-201ENST00000287543 PNPLA8Q9NP80 782 aa20.06■□□□□ 0.8
MALSU1-201ENST00000287543 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.06■□□□□ 0.8
MALSU1-201ENST00000287543 MUC6Q6W4X9 2439 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 PPP1R3GB7ZBB8 358 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 TNFRSF10BO14763 440 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 PMM2O15305 246 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 ABL1P00519 1130 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 SP9P0CG40 484 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 CHRNB1P11230 501 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 CCDC130P13994 396 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 CD58P19256 250 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 IFNAR2P48551 515 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 SLC5A3P53794 718 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 USP4Q13107 963 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 NR1H3Q13133 447 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 ZNF77Q15935 545 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 CCDC40Q4G0X9 1142 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 SNX30Q5VWJ9 437 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 TTI2Q6NXR4 508 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 DDX42Q86XP3 938 aaKnown RBP eCLIP20.05■□□□□ 0.8
MALSU1-201ENST00000287543 CPA6Q8N4T0 437 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 C12orf29Q8N999 325 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 SH3RF2Q8TEC5 729 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 SEMA4DQ92854 862 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 ATP2A3Q93084 1043 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 NKD2Q969F2 451 aaPredicted RBP20.05■□□□□ 0.8
MALSU1-201ENST00000287543 SLC22A12Q96S37 553 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 PHOX2BQ99453 314 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 TMEM30AQ9NV96 361 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 DUS2Q9NX74 493 aaKnown RBP20.05■□□□□ 0.8
MALSU1-201ENST00000287543 HMGXB4Q9UGU5 601 aa20.05■□□□□ 0.8
MALSU1-201ENST00000287543 TCHHQ07283 1943 aa20.04■□□□□ 0.8
MALSU1-201ENST00000287543 FAM92AA1XBS5 289 aa20.04■□□□□ 0.8
MALSU1-201ENST00000287543 P4HA2O15460 535 aa20.04■□□□□ 0.8
MALSU1-201ENST00000287543 OLFM2O95897 454 aa20.04■□□□□ 0.8
MALSU1-201ENST00000287543 CD44P16070 742 aaKnown RBP20.04■□□□□ 0.8
MALSU1-201ENST00000287543 TUBP50607 506 aa20.04■□□□□ 0.8
MALSU1-201ENST00000287543 MAP3K7CLP57077 242 aa20.04■□□□□ 0.8
MALSU1-201ENST00000287543 TNK2Q07912 1038 aa20.04■□□□□ 0.8
MALSU1-201ENST00000287543 PAK1Q13153 545 aa20.04■□□□□ 0.8
MALSU1-201ENST00000287543 CBWD6Q4V339 395 aa20.04■□□□□ 0.8
MALSU1-201ENST00000287543 CBWD3Q5JTY5 395 aa20.04■□□□□ 0.8
MALSU1-201ENST00000287543 CBWD5Q5RIA9 395 aa20.04■□□□□ 0.8
MALSU1-201ENST00000287543 HECTD3Q5T447 861 aa20.04■□□□□ 0.8
MALSU1-201ENST00000287543 SLC35C1Q96A29 364 aa20.04■□□□□ 0.8
MALSU1-201ENST00000287543 HEXIM2Q96MH2 286 aaKnown RBP20.04■□□□□ 0.8
MALSU1-201ENST00000287543 SMOQ99835 787 aa20.04■□□□□ 0.8
MALSU1-201ENST00000287543 FAM126AQ9BYI3 521 aaPredicted RBP20.04■□□□□ 0.8
MALSU1-201ENST00000287543 EBF3Q9H4W6 596 aa20.04■□□□□ 0.8
MALSU1-201ENST00000287543 CISHQ9NSE2 258 aa20.04■□□□□ 0.8
MALSU1-201ENST00000287543 FAM49BQ9NUQ9 324 aa20.04■□□□□ 0.8
MALSU1-201ENST00000287543 KIAA1468Q9P260 1216 aa20.04■□□□□ 0.8
MALSU1-201ENST00000287543 BIN1O00499 593 aa20.03■□□□□ 0.8
MALSU1-201ENST00000287543 SLC9A3R1O14745 358 aaPredicted RBP20.03■□□□□ 0.8
MALSU1-201ENST00000287543 GFRA3O60609 400 aa20.03■□□□□ 0.8
MALSU1-201ENST00000287543 OAS1P00973 400 aaKnown RBP20.03■□□□□ 0.8
MALSU1-201ENST00000287543 BMP6P22004 513 aa20.03■□□□□ 0.8
MALSU1-201ENST00000287543 TBXAS1P24557 533 aaPredicted RBP20.03■□□□□ 0.8
MALSU1-201ENST00000287543 SOX9P48436 509 aa20.03■□□□□ 0.8
MALSU1-201ENST00000287543 CCR3P51677 355 aa20.03■□□□□ 0.8
MALSU1-201ENST00000287543 IFRD2Q12894 506 aaPredicted RBP20.03■□□□□ 0.8
MALSU1-201ENST00000287543 ORC1Q13415 861 aa20.03■□□□□ 0.8
MALSU1-201ENST00000287543 TTC8Q8TAM2 541 aa20.03■□□□□ 0.8
MALSU1-201ENST00000287543 WHAMMQ8TF30 809 aa20.03■□□□□ 0.8
MALSU1-201ENST00000287543 TMEM176AQ96HP8 235 aa20.03■□□□□ 0.8
MALSU1-201ENST00000287543 TWNKQ96RR1 684 aa20.03■□□□□ 0.8
MALSU1-201ENST00000287543 DUSP9Q99956 384 aaKnown RBP20.03■□□□□ 0.8
MALSU1-201ENST00000287543 HPS4Q9NQG7 708 aa20.03■□□□□ 0.8
MALSU1-201ENST00000287543 ADORA2BP29275 332 aa20.02■□□□□ 0.8
MALSU1-201ENST00000287543 FMO5P49326 533 aa20.02■□□□□ 0.8
MALSU1-201ENST00000287543 NRLP54845 237 aa20.02■□□□□ 0.8
MALSU1-201ENST00000287543 SLC8A3P57103 927 aa20.02■□□□□ 0.8
MALSU1-201ENST00000287543 CSTF1Q05048 431 aaKnown RBP20.02■□□□□ 0.8
MALSU1-201ENST00000287543 GRSF1Q12849 480 aaKnown RBP eCLIP20.02■□□□□ 0.8
MALSU1-201ENST00000287543 MTAPQ13126 283 aa20.02■□□□□ 0.8
MALSU1-201ENST00000287543 MAML2Q8IZL2 1156 aaPredicted RBP20.02■□□□□ 0.8
MALSU1-201ENST00000287543 SCAMP5Q8TAC9 235 aa20.02■□□□□ 0.8
MALSU1-201ENST00000287543 DUSP16Q9BY84 665 aa20.02■□□□□ 0.8
MALSU1-201ENST00000287543 ECT2Q9H8V3 914 aa20.02■□□□□ 0.8
MALSU1-201ENST00000287543 TLR8Q9NR97 1041 aaKnown RBP20.02■□□□□ 0.8
MALSU1-201ENST00000287543 CHORDC1Q9UHD1 332 aaPredicted RBP20.02■□□□□ 0.8
MALSU1-201ENST00000287543 CTNND2Q9UQB3 1225 aa20.02■□□□□ 0.8
MALSU1-201ENST00000287543 LEFTY2O00292 366 aa20.01■□□□□ 0.79
MALSU1-201ENST00000287543 TRDMT1O14717 391 aaKnown RBP20.01■□□□□ 0.79
MALSU1-201ENST00000287543 NFATC1O95644 943 aa20.01■□□□□ 0.79
MALSU1-201ENST00000287543 ZDHHC11BP0C7U3 371 aa20.01■□□□□ 0.79
MALSU1-201ENST00000287543 CUL2Q13617 745 aa20.01■□□□□ 0.79
MALSU1-201ENST00000287543 ZNF394Q53GI3 561 aa20.01■□□□□ 0.79
MALSU1-201ENST00000287543 TRIM68Q6AZZ1 485 aa20.01■□□□□ 0.79
MALSU1-201ENST00000287543 SPEM1Q8N4L4 309 aa20.01■□□□□ 0.79
MALSU1-201ENST00000287543 TTC16Q8NEE8 873 aa20.01■□□□□ 0.79
MALSU1-201ENST00000287543 ZMIZ2Q8NF64 920 aa20.01■□□□□ 0.79
MALSU1-201ENST00000287543 TATDN2Q93075 761 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms