RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 CDH8P55286 799 aa10.36□□□□□ -0.75
VPS41-201ENST00000265745 NOP14P78316 857 aaKnown RBP10.36□□□□□ -0.75
VPS41-201ENST00000265745 ZXDBP98169 803 aa10.36□□□□□ -0.75
VPS41-201ENST00000265745 AMPD2Q01433 879 aa10.36□□□□□ -0.75
VPS41-201ENST00000265745 DMWDQ09019 674 aa10.36□□□□□ -0.75
VPS41-201ENST00000265745 GRSF1Q12849 480 aaKnown RBP eCLIP10.36□□□□□ -0.75
VPS41-201ENST00000265745 BIRC3Q13489 604 aa10.36□□□□□ -0.75
VPS41-201ENST00000265745 NCOA4Q13772 614 aa10.36□□□□□ -0.75
VPS41-201ENST00000265745 MTF1Q14872 753 aa10.36□□□□□ -0.75
VPS41-201ENST00000265745 FSTL4Q6MZW2 842 aa10.36□□□□□ -0.75
VPS41-201ENST00000265745 B3GALNT2Q8NCR0 500 aa10.36□□□□□ -0.75
VPS41-201ENST00000265745 SH3RF2Q8TEC5 729 aa10.36□□□□□ -0.75
VPS41-201ENST00000265745 B3GNT5Q9BYG0 378 aa10.36□□□□□ -0.75
VPS41-201ENST00000265745 ZNF518BQ9C0D4 1074 aa10.36□□□□□ -0.75
VPS41-201ENST00000265745 LINC00597Q9H2U6 94 aa10.36□□□□□ -0.75
VPS41-201ENST00000265745 ECT2Q9H8V3 914 aa10.36□□□□□ -0.75
VPS41-201ENST00000265745 FBRSL1Q9HCM7 1045 aaKnown RBP10.36□□□□□ -0.75
VPS41-201ENST00000265745 TMEM30AQ9NV96 361 aa10.36□□□□□ -0.75
VPS41-201ENST00000265745 DUS2Q9NX74 493 aaKnown RBP10.36□□□□□ -0.75
VPS41-201ENST00000265745 EHD2Q9NZN4 543 aa10.36□□□□□ -0.75
VPS41-201ENST00000265745 TRPM5Q9NZQ8 1165 aa10.36□□□□□ -0.75
VPS41-201ENST00000265745 NCDNQ9UBB6 729 aa10.36□□□□□ -0.75
VPS41-201ENST00000265745 ARHGAP26Q9UNA1 814 aa10.36□□□□□ -0.75
VPS41-201ENST00000265745 CHURC1-FNTBB4DL54 471 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 CLDN5O00501 218 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 IKBKBO14920 756 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 NR3C1P04150 777 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 TCF3P15923 654 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 HOXC13P31276 330 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 CNR2P34972 360 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 GJA4P35212 333 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 ABL2P42684 1182 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 PPP3CCP48454 512 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 FNTBP49356 437 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 PDE6CP51160 858 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 DLG4P78352 724 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 TAF10Q12962 218 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 USP4Q13107 963 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 KCNB1Q14721 858 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 SGSM1Q2NKQ1 1148 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 ZNF699Q32M78 642 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 EML3Q32P44 896 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 NAIF1Q69YI7 327 aaPredicted RBP10.35□□□□□ -0.75
VPS41-201ENST00000265745 PKN3Q6P5Z2 889 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 ERMP1Q7Z2K6 904 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 LONP2Q86WA8 852 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 CPA6Q8N4T0 437 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 GPR161Q8N6U8 529 aaKnown RBP10.35□□□□□ -0.75
VPS41-201ENST00000265745 TTC16Q8NEE8 873 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 SECISBP2LQ93073 1101 aaKnown RBP10.35□□□□□ -0.75
VPS41-201ENST00000265745 ELMO3Q96BJ8 720 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 P2RY13Q9BPV8 354 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 ELOVL4Q9GZR5 314 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 RNF38Q9H0F5 515 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 SMYD3Q9H7B4 428 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 TRAF3IP3Q9Y228 551 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 ATP6V1DQ9Y5K8 247 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 WNT6Q9Y6F9 365 aa10.35□□□□□ -0.75
VPS41-201ENST00000265745 A0A1W2PQ27 194 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 A0A1W2PQ64 194 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 A0A1W2PQD8 194 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 ATG13O75143 517 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 RHOBTB3O94955 611 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 OLFM2O95897 454 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 EGFP01133 1207 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 DRD1P21728 446 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 RAP1GAPP47736 663 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 IFNAR2P48551 515 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 SLC7A9P82251 487 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 DPYDQ12882 1025 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 SIM2Q14190 667 aaPredicted RBP10.34□□□□□ -0.75
VPS41-201ENST00000265745 PUM1Q14671 1186 aaKnown RBP eCLIP10.34□□□□□ -0.75
VPS41-201ENST00000265745 LPAL2Q16609 132 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 ZACNQ401N2 412 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 ZNF667Q5HYK9 610 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 C1orf220Q5T0J3 134 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 HEATR6Q6AI08 1181 aaKnown RBP10.34□□□□□ -0.75
VPS41-201ENST00000265745 LAIR1Q6GTX8 287 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 PAQR9Q6ZVX9 377 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 SV2AQ7L0J3 742 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 ADGRG2Q8IZP9 1017 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 KIAA1958Q8N8K9 716 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 TAF4BQ92750 862 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 ATP2A3Q93084 1043 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 KCNK16Q96T55 309 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 SCAND2PQ9GZW5 306 aaPredicted RBP10.34□□□□□ -0.75
VPS41-201ENST00000265745 SDCBP2Q9H190 292 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 PRM3Q9NNZ6 103 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 DLL3Q9NYJ7 618 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 IL37Q9NZH6 218 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 GMEB2Q9UKD1 530 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 RAB23Q9ULC3 237 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 FRMD4BQ9Y2L6 1034 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 CEP250Q9BV73 2442 aa10.34□□□□□ -0.75
VPS41-201ENST00000265745 DCHS1Q96JQ0 3298 aa10.33□□□□□ -0.76
VPS41-201ENST00000265745 LEFTY2O00292 366 aa10.33□□□□□ -0.76
VPS41-201ENST00000265745 MAPK13O15264 365 aa10.33□□□□□ -0.76
VPS41-201ENST00000265745 CALUO43852 315 aaPredicted RBP10.33□□□□□ -0.76
VPS41-201ENST00000265745 RNF40O75150 1001 aa10.33□□□□□ -0.76
VPS41-201ENST00000265745 ZNF202O95125 648 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms