RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 KBTBD12Q3ZCT8 623 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 CRY2Q49AN0 593 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 OLFML2BQ68BL8 750 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 LMBRD2Q68DH5 695 aaPredicted RBP15.61■□□□□ 0.09
XRCC1-201ENST00000262887 TATDN1Q6P1N9 297 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 RNF111Q6ZNA4 994 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 TMEM161BQ8NDZ6 487 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 DNAJC1Q96KC8 554 aaKnown RBP15.61■□□□□ 0.09
XRCC1-201ENST00000262887 RILPQ96NA2 401 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 SRPK1Q96SB4 655 aaKnown RBP15.61■□□□□ 0.09
XRCC1-201ENST00000262887 MXRA8Q9BRK3 442 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 XPO7Q9UIA9 1087 aaKnown RBP15.61■□□□□ 0.09
XRCC1-201ENST00000262887 ADAMTS6Q9UKP5 1117 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 PPME1Q9Y570 386 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 TCRBV7S3A2A0A539 114 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 MEI4A8MW99 385 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 TMEM63AO94886 807 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 CDKN2BP42772 138 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 AQP5P55064 265 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 ZNF200P98182 395 aaPredicted RBP15.61■□□□□ 0.09
XRCC1-201ENST00000262887 BST1Q10588 318 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 ANKRD20A4Q4UJ75 823 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 ATG16L1Q676U5 607 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 SPOPLQ6IQ16 392 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 TMEM270Q6UE05 265 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 B3GNT6Q6ZMB0 384 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 SLC26A7Q8TE54 656 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 RSAD2Q8WXG1 361 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 FBXL18Q96ME1 805 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 ZNRF3Q9ULT6 936 aa15.61■□□□□ 0.09
XRCC1-201ENST00000262887 ITGB5P18084 799 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 PEX2P28328 305 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 CPOXP36551 454 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 RPL26P61254 145 aaKnown RBP15.6■□□□□ 0.09
XRCC1-201ENST00000262887 LRRC38Q5VT99 294 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 KLC3Q6P597 504 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 UGT2A3Q6UWM9 527 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 CDHR3Q6ZTQ4 885 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 SHKBP1Q8TBC3 707 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 SLC44A1Q8WWI5 657 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 E2F7Q96AV8 911 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 MCEEQ96PE7 176 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 FAM213AQ9BRX8 229 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 AGTPBP1Q9UPW5 1226 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 PCDHB4Q9Y5E5 795 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 CCDC195A0A1B0GUA6 201 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 TCRBV9S1A1TA0A576 114 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 VILLO15195 856 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 AP1G1O43747 822 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 GH2P01242 217 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 SERPINA6P08185 405 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 TSHRP16473 764 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 PTPN7P35236 360 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 RPL22P35268 128 aaKnown RBP15.6■□□□□ 0.09
XRCC1-201ENST00000262887 NPTX2P47972 431 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 OTUD4Q01804 1114 aaKnown RBP15.6■□□□□ 0.09
XRCC1-201ENST00000262887 ZNF252P-AS1Q0IIN9 211 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 DMP1Q13316 513 aaPredicted RBP15.6■□□□□ 0.09
XRCC1-201ENST00000262887 SLC39A4Q6P5W5 647 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 RBM44Q6ZP01 1051 aaKnown RBP15.6■□□□□ 0.09
XRCC1-201ENST00000262887 GPD1LQ8N335 351 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 ACTL9Q8TC94 416 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 AGBL1Q96MI9 1066 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 PRICKLE1Q96MT3 831 aaPredicted RBP15.6■□□□□ 0.09
XRCC1-201ENST00000262887 SMYD3Q9H7B4 428 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 KCNH7Q9NS40 1196 aa15.6■□□□□ 0.09
XRCC1-201ENST00000262887 MYH9P35579 1960 aaKnown RBP15.59■□□□□ 0.09
XRCC1-201ENST00000262887 TMEM191CA6NGB0 347 aa15.59■□□□□ 0.09
XRCC1-201ENST00000262887 ZNF189O75820 626 aaPredicted RBP15.59■□□□□ 0.09
XRCC1-201ENST00000262887 ATP5BP06576 529 aaKnown RBP15.59■□□□□ 0.09
XRCC1-201ENST00000262887 TMEM191BP0C7N4 346 aa15.59■□□□□ 0.09
XRCC1-201ENST00000262887 GYS1P13807 737 aa15.59■□□□□ 0.09
XRCC1-201ENST00000262887 EIF4BP23588 611 aaKnown RBP15.59■□□□□ 0.09
XRCC1-201ENST00000262887 ELK3P41970 407 aa15.59■□□□□ 0.09
XRCC1-201ENST00000262887 CRKP46108 304 aa15.59■□□□□ 0.09
XRCC1-201ENST00000262887 BASP1P80723 227 aaKnown RBP15.59■□□□□ 0.09
XRCC1-201ENST00000262887 UBAP2LQ14157 1087 aaKnown RBP15.59■□□□□ 0.09
XRCC1-201ENST00000262887 DCUN1D2Q6PH85 259 aa15.59■□□□□ 0.09
XRCC1-201ENST00000262887 CATSPER2Q96P56 530 aa15.59■□□□□ 0.09
XRCC1-201ENST00000262887 CCNL1Q9UK58 526 aaPredicted RBP15.59■□□□□ 0.09
XRCC1-201ENST00000262887 C15orf38-AP3S2A0A0A6YYH1 394 aa15.59■□□□□ 0.09
XRCC1-201ENST00000262887 BTBD19C9JJ37 291 aa15.59■□□□□ 0.09
XRCC1-201ENST00000262887 RPL5P46777 297 aaKnown RBP15.59■□□□□ 0.09
XRCC1-201ENST00000262887 YWHAGP61981 247 aaKnown RBP eCLIP15.59■□□□□ 0.09
XRCC1-201ENST00000262887 SLC25A3Q00325 362 aa15.59■□□□□ 0.09
XRCC1-201ENST00000262887 CDK18Q07002 472 aa15.59■□□□□ 0.09
XRCC1-201ENST00000262887 NCOA4Q13772 614 aa15.59■□□□□ 0.09
XRCC1-201ENST00000262887 SH3BP5LQ7L8J4 393 aa15.59■□□□□ 0.09
XRCC1-201ENST00000262887 ARPINQ7Z6K5 226 aa15.59■□□□□ 0.09
XRCC1-201ENST00000262887 CRLF3Q8IUI8 442 aa15.59■□□□□ 0.09
XRCC1-201ENST00000262887 RNF168Q8IYW5 571 aaPredicted RBP15.59■□□□□ 0.09
XRCC1-201ENST00000262887 ZNF516Q92618 1163 aa15.59■□□□□ 0.09
XRCC1-201ENST00000262887 ZNF395Q9H8N7 513 aaPredicted RBP15.59■□□□□ 0.09
XRCC1-201ENST00000262887 KMT5AQ9NQR1 393 aa15.59■□□□□ 0.09
XRCC1-201ENST00000262887 DDX56Q9NY93 547 aaKnown RBP15.59■□□□□ 0.09
XRCC1-201ENST00000262887 PCNTO95613 3336 aa15.59■□□□□ 0.09
XRCC1-201ENST00000262887 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.58■□□□□ 0.09
XRCC1-201ENST00000262887 KBTBD13C9JR72 458 aa15.58■□□□□ 0.09
XRCC1-201ENST00000262887 HNRNPDLO14979 420 aaKnown RBP15.58■□□□□ 0.09
XRCC1-201ENST00000262887 HLA-DRAP01903 254 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms