RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 FLT3P36888 993 aa13.66□□□□□ -0.22
VAMP7-201ENST00000262640 HADHQ16836 314 aaKnown RBP13.66□□□□□ -0.22
VAMP7-201ENST00000262640 CTXN3Q4LDR2 81 aa13.66□□□□□ -0.22
VAMP7-201ENST00000262640 CCDC70Q6NSX1 233 aa13.66□□□□□ -0.22
VAMP7-201ENST00000262640 POLNQ7Z5Q5 900 aa13.66□□□□□ -0.22
VAMP7-201ENST00000262640 CEP57Q86XR8 500 aa13.66□□□□□ -0.22
VAMP7-201ENST00000262640 ZMIZ2Q8NF64 920 aa13.66□□□□□ -0.22
VAMP7-201ENST00000262640 KHSRPQ92945 711 aaKnown RBP eCLIP13.66□□□□□ -0.227e-9■■■□□ 15.4
VAMP7-201ENST00000262640 OXCT2Q9BYC2 517 aaPredicted RBP13.66□□□□□ -0.22
VAMP7-201ENST00000262640 CARNS1A5YM72 827 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 NT5C1B-RDH14C9J2C7 533 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 H7C4K7 107 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 GRAP2O75791 330 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 RNF8O76064 485 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 CACNA2D1P54289 1103 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 NFE2Q16621 373 aaPredicted RBP13.65□□□□□ -0.22
VAMP7-201ENST00000262640 RAB41Q5JT25 222 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 CMTR2Q8IYT2 770 aaKnown RBP13.65□□□□□ -0.22
VAMP7-201ENST00000262640 EXD1Q8NHP7 514 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 CLEC4CQ8WTT0 213 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 NCAPGQ9BPX3 1015 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 RC3H2Q9HBD1 1191 aaKnown RBP13.65□□□□□ -0.22
VAMP7-201ENST00000262640 PNPLA8Q9NP80 782 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 DDX56Q9NY93 547 aaKnown RBP13.65□□□□□ -0.22
VAMP7-201ENST00000262640 HHLA1C9JL84 531 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 CCDC188H7C350 402 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 KRIT1O00522 736 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 SART1O43290 800 aaKnown RBP13.65□□□□□ -0.22
VAMP7-201ENST00000262640 LRCH4O75427 683 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 SDC4P31431 198 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 PCK1P35558 622 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 PBX3P40426 434 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 TKTL1P51854 596 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 MRPS5P82675 430 aaKnown RBP13.65□□□□□ -0.22
VAMP7-201ENST00000262640 ADCY1Q08828 1119 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 TAF5Q15542 800 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 SLC39A12Q504Y0 691 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 TRNP1Q6NT89 227 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 FUBP3Q96I24 572 aaKnown RBP eCLIP13.65□□□□□ -0.22
VAMP7-201ENST00000262640 KCNK16Q96T55 309 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 RHOBTB2Q9BYZ6 727 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 CNGB3Q9NQW8 809 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 TMEM30AQ9NV96 361 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 COL4A6Q14031 1691 aa13.65□□□□□ -0.22
VAMP7-201ENST00000262640 HSF2BPO75031 334 aa13.64□□□□□ -0.23
VAMP7-201ENST00000262640 ZRANB2O95218 330 aaKnown RBP eCLIP13.64□□□□□ -0.23
VAMP7-201ENST00000262640 GLI1P08151 1106 aa13.64□□□□□ -0.23
VAMP7-201ENST00000262640 KRT7P08729 469 aa13.64□□□□□ -0.23
VAMP7-201ENST00000262640 GJC1P36383 396 aa13.64□□□□□ -0.23
VAMP7-201ENST00000262640 CETN2P41208 172 aa13.64□□□□□ -0.23
VAMP7-201ENST00000262640 PTPN9P43378 593 aa13.64□□□□□ -0.23
VAMP7-201ENST00000262640 CDR1P51861 262 aa13.64□□□□□ -0.23
VAMP7-201ENST00000262640 CCDC14Q49A88 953 aa13.64□□□□□ -0.23
VAMP7-201ENST00000262640 AADACL2Q6P093 401 aa13.64□□□□□ -0.23
VAMP7-201ENST00000262640 ANKS3Q6ZW76 656 aa13.64□□□□□ -0.23
VAMP7-201ENST00000262640 TMEM173Q86WV6 379 aaPredicted RBP13.64□□□□□ -0.23
VAMP7-201ENST00000262640 RCOR2Q8IZ40 523 aa13.64□□□□□ -0.23
VAMP7-201ENST00000262640 ARFGAP1Q8N6T3 406 aa13.64□□□□□ -0.23
VAMP7-201ENST00000262640 BCL7CQ8WUZ0 217 aaPredicted RBP13.64□□□□□ -0.23
VAMP7-201ENST00000262640 RBM41Q96IZ5 413 aaKnown RBP13.64□□□□□ -0.23
VAMP7-201ENST00000262640 TTPALQ9BTX7 342 aa13.64□□□□□ -0.23
VAMP7-201ENST00000262640 GOLGA6L10A0A0M3HER8 536 aa13.64□□□□□ -0.23
VAMP7-201ENST00000262640 EFEMP2O95967 443 aa13.64□□□□□ -0.23
VAMP7-201ENST00000262640 OR4Q2P0C623 313 aa13.64□□□□□ -0.23
VAMP7-201ENST00000262640 TCF4P15884 667 aa13.64□□□□□ -0.23
VAMP7-201ENST00000262640 SLC25A11Q02978 314 aaKnown RBP13.64□□□□□ -0.23
VAMP7-201ENST00000262640 FPGSQ05932 587 aa13.64□□□□□ -0.23
VAMP7-201ENST00000262640 BTG3Q14201 252 aaPredicted RBP13.64□□□□□ -0.23
VAMP7-201ENST00000262640 SPOUT1Q5T280 376 aaKnown RBP13.64□□□□□ -0.23
VAMP7-201ENST00000262640 FAM117BQ6P1L5 589 aa13.64□□□□□ -0.23
VAMP7-201ENST00000262640 SLC13A5Q86YT5 568 aaPredicted RBP13.64□□□□□ -0.23
VAMP7-201ENST00000262640 IGSF21Q96ID5 467 aa13.64□□□□□ -0.23
VAMP7-201ENST00000262640 ZNF558Q96NG5 402 aa13.64□□□□□ -0.23
VAMP7-201ENST00000262640 AP1M1Q9BXS5 423 aa13.64□□□□□ -0.23
VAMP7-201ENST00000262640 DAB1O75553 588 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 FGBP02675 491 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 KRT1P04264 644 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 RHOXF2BP0C7M4 288 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 LAG3P18627 525 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 PPP2R5EQ16537 467 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 USP41Q3LFD5 358 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 GLE1Q53GS7 698 aaKnown RBP13.63□□□□□ -0.23
VAMP7-201ENST00000262640 KCNT2Q6UVM3 1135 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 OTOP2Q7RTS6 562 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 GPRIN1Q7Z2K8 1008 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 SCML4Q8N228 414 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 MAIP1Q8WWC4 291 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 B3GALT6Q96L58 329 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 CFAP57Q96MR6 1250 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 RHOXF2Q9BQY4 288 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 DDX23Q9BUQ8 820 aaKnown RBP13.63□□□□□ -0.23
VAMP7-201ENST00000262640 ULBP1Q9BZM6 244 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 ANKZF1Q9H8Y5 726 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.63□□□□□ -0.23
VAMP7-201ENST00000262640 PCDHB5Q9Y5E4 795 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 TARSL2A2RTX5 802 aaKnown RBP13.63□□□□□ -0.23
VAMP7-201ENST00000262640 TBC1D4O60343 1298 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 TUBBP07437 444 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 MIPP30301 263 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 NDUFV1P49821 464 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms