RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 BCAT1P54687 386 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 GNGT1P63211 74 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 OTUD4Q01804 1114 aaKnown RBP19.37■□□□□ 0.69
HOXC11-201ENST00000243082 P3H1Q32P28 736 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 TTC19Q6DKK2 380 aaPredicted RBP19.37■□□□□ 0.69
HOXC11-201ENST00000243082 ZDHHC17Q8IUH5 632 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 TOP6BLQ8N6T0 577 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 UHMK1Q8TAS1 419 aaKnown RBP19.37■□□□□ 0.69
HOXC11-201ENST00000243082 CCHCR1Q8TD31 782 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 TMEM121Q9BTD3 319 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 TMEM109Q9BVC6 243 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 OSBPL7Q9BZF2 842 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 PRDM4Q9UKN5 801 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 TMEM88BA6NKF7 163 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 DCDC2CA8MYV0 355 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 ARSEP51690 589 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 AFF1P51825 1210 aaKnown RBP19.37■□□□□ 0.69
HOXC11-201ENST00000243082 SNX16P57768 344 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 KCNA10Q16322 511 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 ZSCAN26Q16670 478 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 CDO1Q16878 200 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 CCSAPQ6IQ19 270 aaPredicted RBP19.37■□□□□ 0.69
HOXC11-201ENST00000243082 PAXIP1Q6ZW49 1069 aaPredicted RBP19.37■□□□□ 0.69
HOXC11-201ENST00000243082 HOOK3Q86VS8 718 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 TTC13Q8NBP0 860 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 KLHDC9Q8NEP7 349 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 SLC2A14Q8TDB8 520 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 TLCD1Q96CP7 247 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 DDX23Q9BUQ8 820 aaKnown RBP19.37■□□□□ 0.69
HOXC11-201ENST00000243082 FRMD8P1Q9BZ68 369 aaPredicted RBP19.37■□□□□ 0.69
HOXC11-201ENST00000243082 A6NNZ2 444 aa19.36■□□□□ 0.69
HOXC11-201ENST00000243082 HPDP32754 393 aaPredicted RBP19.36■□□□□ 0.69
HOXC11-201ENST00000243082 ATP11AP98196 1134 aa19.36■□□□□ 0.69
HOXC11-201ENST00000243082 PLCB3Q01970 1234 aa19.36■□□□□ 0.69
HOXC11-201ENST00000243082 TUBB8Q3ZCM7 444 aa19.36■□□□□ 0.69
HOXC11-201ENST00000243082 AGO3Q9H9G7 860 aaKnown RBP19.36■□□□□ 0.69
HOXC11-201ENST00000243082 DNAJC17Q9NVM6 304 aaKnown RBP19.36■□□□□ 0.69
HOXC11-201ENST00000243082 DNALI1O14645 258 aaPredicted RBP19.35■□□□□ 0.69
HOXC11-201ENST00000243082 TKTP29401 623 aaKnown RBP19.35■□□□□ 0.69
HOXC11-201ENST00000243082 MLH1P40692 756 aa19.35■□□□□ 0.69
HOXC11-201ENST00000243082 MAGOHP61326 146 aaKnown RBP19.35■□□□□ 0.69
HOXC11-201ENST00000243082 SKIDA1Q1XH10 827 aa19.35■□□□□ 0.69
HOXC11-201ENST00000243082 RFX6Q8HWS3 928 aa19.35■□□□□ 0.69
HOXC11-201ENST00000243082 CLEC4CQ8WTT0 213 aa19.35■□□□□ 0.69
HOXC11-201ENST00000243082 PGM2Q96G03 612 aa19.35■□□□□ 0.69
HOXC11-201ENST00000243082 GAD1Q99259 594 aa19.35■□□□□ 0.69
HOXC11-201ENST00000243082 CALN1Q9BXU9 219 aa19.35■□□□□ 0.69
HOXC11-201ENST00000243082 TSPYL2Q9H2G4 693 aaPredicted RBP19.35■□□□□ 0.69
HOXC11-201ENST00000243082 RSAD1Q9HA92 442 aa19.35■□□□□ 0.69
HOXC11-201ENST00000243082 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.35■□□□□ 0.69
HOXC11-201ENST00000243082 MIOSQ9NXC5 875 aa19.35■□□□□ 0.69
HOXC11-201ENST00000243082 CACNG4Q9UBN1 327 aa19.35■□□□□ 0.69
HOXC11-201ENST00000243082 CYB561D2O14569 222 aa19.35■□□□□ 0.69
HOXC11-201ENST00000243082 EIF3HO15372 352 aaKnown RBP eCLIP19.35■□□□□ 0.69
HOXC11-201ENST00000243082 PRPSAP2O60256 369 aa19.35■□□□□ 0.69
HOXC11-201ENST00000243082 SDC4P31431 198 aa19.35■□□□□ 0.69
HOXC11-201ENST00000243082 CDH6P55285 790 aa19.35■□□□□ 0.69
HOXC11-201ENST00000243082 GUCY1A3Q02108 690 aa19.35■□□□□ 0.69
HOXC11-201ENST00000243082 MMRN1Q13201 1228 aa19.35■□□□□ 0.69
HOXC11-201ENST00000243082 B3GALNT2Q8NCR0 500 aa19.35■□□□□ 0.69
HOXC11-201ENST00000243082 FAM172AQ8WUF8 416 aa19.35■□□□□ 0.69
HOXC11-201ENST00000243082 LPPQ93052 612 aa19.35■□□□□ 0.69
HOXC11-201ENST00000243082 TNIP3Q96KP6 325 aa19.35■□□□□ 0.69
HOXC11-201ENST00000243082 CYLDQ9NQC7 956 aa19.35■□□□□ 0.69
HOXC11-201ENST00000243082 RNF186Q9NXI6 227 aa19.35■□□□□ 0.69
HOXC11-201ENST00000243082 APOC4-APOC2K7ER74 178 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 ATP2C2O75185 946 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 TTC4O95801 387 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 APOC2P02655 101 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 FAM163BP0C2L3 166 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 ELNP15502 786 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 GPS1Q13098 491 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 DPYSL3Q14195 570 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 WSCD1Q658N2 575 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 SLC26A9Q7LBE3 791 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 RELL1Q8IUW5 271 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 ARFGAP2Q8N6H7 521 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 C10orf88Q9H8K7 445 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 PCDH9Q9HC56 1237 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 SLC38A7Q9NVC3 462 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 TLDC2A0PJX2 215 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 SGK1O00141 431 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 GABRDO14764 452 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 GPR182O15218 404 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 ACSL3O95573 720 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 MYCNP04198 464 aaPredicted RBP19.34■□□□□ 0.69
HOXC11-201ENST00000243082 LCP1P13796 627 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 PRKAR2AP13861 404 aaKnown RBP19.34■□□□□ 0.69
HOXC11-201ENST00000243082 PECAM1P16284 738 aaPredicted RBP19.34■□□□□ 0.69
HOXC11-201ENST00000243082 SCNN1AP37088 669 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 THPOP40225 353 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 HNRNPH2P55795 449 aaKnown RBP19.34■□□□□ 0.69
HOXC11-201ENST00000243082 KYNUQ16719 465 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 CCDC142Q17RM4 750 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 BOLA3Q53S33 107 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 C6orf118Q5T5N4 469 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 AGMOQ6ZNB7 445 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 ZCCHC9Q8N567 271 aaKnown RBP19.34■□□□□ 0.69
HOXC11-201ENST00000243082 EPS8L3Q8TE67 593 aaKnown RBP19.34■□□□□ 0.69
HOXC11-201ENST00000243082 HSFY1Q96LI6 401 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms