RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 CRTAC1Q9NQ79 661 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 E5RJQ4 531 aa11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 RNF225M0QZC1 329 aaPredicted RBP11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 ATF2P15336 505 aa11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 ERVFC1P60507 584 aa11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 RAB33AQ14088 237 aa11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 CDK5RAP1Q96SZ6 601 aaKnown RBP11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 RASAL2Q9UJF2 1139 aa11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 TET1Q8NFU7 2136 aa11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 NCK2O43639 380 aa11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 C1QBPQ07021 282 aaKnown RBP11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 KRT81Q14533 505 aa11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 AJAP1Q9UKB5 411 aaPredicted RBP11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 YIPF1Q9Y548 306 aa11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 ASB3Q9Y575 518 aa11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 A0A1W2PPC1 479 aa11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 GABRDO14764 452 aa11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 MBL2P11226 248 aaPredicted RBP11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 PTPN2P17706 415 aa11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 SULT1E1P49888 294 aa11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 FMO1Q01740 532 aa11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 MAPK8IP2Q13387 824 aaPredicted RBP11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 MTF1Q14872 753 aa11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 RARS2Q5T160 578 aaKnown RBP11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 PDLIM2Q96JY6 352 aa11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 MCEEQ96PE7 176 aa11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 CDCA3Q99618 268 aaPredicted RBP11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 ZBP1Q9H171 429 aa11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 METTL5Q9NRN9 209 aaKnown RBP11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 FNIP2Q9P278 1114 aa11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 IP6K2Q9UHH9 426 aa11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 FAM50BQ9Y247 325 aa11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 ZKSCAN5Q9Y2L8 839 aa11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 SH3BP1Q9Y3L3 701 aa11.69□□□□□ -0.54
TNFAIP3-201ENST00000237289 SOAT2O75908 522 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 FGF19O95750 216 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 HMBSP08397 361 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 AARSP49588 968 aaKnown RBP eCLIP11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 ZNF268Q14587 947 aaPredicted RBP11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 CCDC70Q6NSX1 233 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 TMC5Q6UXY8 1006 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 FUKQ8N0W3 1084 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 RFFLQ8WZ73 363 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 C16orf45Q96MC5 204 aaPredicted RBP11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 KCNK16Q96T55 309 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 UVRAGQ9P2Y5 699 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 PCDHGC3Q9UN70 934 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 TTC3P53804 2025 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 DDX3XO00571 662 aaKnown RBP eCLIP11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 MEFVO15553 781 aaPredicted RBP11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 B4GALT3O60512 393 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 FOSL2P15408 326 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 GABRR2P28476 465 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 CDC25CP30307 473 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 MIB1Q86YT6 1006 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 MAP7D3Q8IWC1 876 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 TRIM58Q8NG06 486 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 VCPIP1Q96JH7 1222 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 FERMT1Q9BQL6 677 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 HSF2BPO75031 334 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 MOCS2O96007 188 aaPredicted RBP11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 PAFAH1B1P43034 410 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 PSEN1P49768 467 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 SLC5A3P53794 718 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 YWHAZP63104 245 aaKnown RBP11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 RIPOR3Q96MK2 946 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 TTYH3Q9C0H2 523 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 CNGB3Q9NQW8 809 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 DZANK1Q9NVP4 752 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 TMEM253P0C7T8 217 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 HAPLN1P10915 354 aaPredicted RBP11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 EFEMP1Q12805 493 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 MEA1Q16626 185 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 SMYD5Q6GMV2 418 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 MCOLN2Q8IZK6 566 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 MRPL38Q96DV4 380 aaKnown RBP11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 CALR3Q96L12 384 aaKnown RBP11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 RHOBTB2Q9BYZ6 727 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 MAFFQ9ULX9 164 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 INSL5Q9Y5Q6 135 aa11.68□□□□□ -0.54
TNFAIP3-201ENST00000237289 WDR27A2RRH5 827 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 C2orf71A6NGG8 1288 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 ATMINO43313 823 aaPredicted RBP11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 TGM5O43548 720 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 LTFP02788 710 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 RRM1P23921 792 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 HNRNPH3P31942 346 aaKnown RBP11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 SLC6A3Q01959 620 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 DEUP1Q05D60 604 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 TAF10Q12962 218 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 CFAP221Q4G0U5 840 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 FEZF2Q8TBJ5 459 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 EDEM1Q92611 657 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 CLSTN3Q9BQT9 956 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 OLA1Q9NTK5 396 aaKnown RBP11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 GPD1P21695 349 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 RDXP35241 583 aaKnown RBP11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 MAGEA11P43364 429 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms