RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 CYP1A2P05177 515 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 TUBBP07437 444 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 EPHB1P54762 984 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 HADHBP55084 474 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 ITIH3Q06033 890 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 LAPTM4AQ15012 233 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 PLA2G2CQ5R387 149 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 LIN9Q5TKA1 542 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 ADAT2Q7Z6V5 191 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 SESTD1Q86VW0 696 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 RGL4Q8IZJ4 473 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 BEST2Q8NFU1 509 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 TRIM11Q96F44 468 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 AP1M1Q9BXS5 423 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 CELF4Q9BZC1 486 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 PLEKHA5Q9HAU0 1116 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 OGFRQ9NZT2 677 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 ZIM2Q9NZV7 527 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 SRRDQ9UH36 339 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 ITGA11Q9UKX5 1188 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 NOC2LQ9Y3T9 749 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 SNX9Q9Y5X1 595 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 MIF4GDA9UHW6 222 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 BHMG1C9JSJ3 638 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 H0Y3Z8 333 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 ADAMTS4O75173 837 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 RPS6KA5O75582 802 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 AGR2O95994 175 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 JUNDP17535 347 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 HALP42357 657 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 MRPS6P82932 125 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 PTPRNQ16849 979 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 C11orf63Q6NUN7 778 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 MON1BQ7L1V2 547 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 MAATS1Q7Z4T9 603 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 FAM228AQ86W67 206 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 KLHL7Q8IXQ5 586 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 USP38Q8NB14 1042 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 TMEM35BQ8NCS4 154 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 ACTRT1Q8TDG2 376 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 HDAC7Q8WUI4 952 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 TFAP2BQ92481 460 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 KRT35Q92764 455 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 SNX27Q96L92 541 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 KRT12Q99456 494 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 BCO2Q9BYV7 579 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 TRIM7Q9C029 511 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 CARD9Q9H257 536 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 MRPL47Q9HD33 250 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 CHCHD3Q9NX63 227 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 RAB21Q9UL25 225 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 STXBP5LQ9Y2K9 1186 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 KRIT1O00522 736 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 CES2O00748 559 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 TLR3O15455 904 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 MED7O43513 233 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 FZD6O60353 706 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 CILPO75339 1184 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 HMGCRP04035 888 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 MYBL1P10243 752 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 RPL17P18621 184 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 MCM3P25205 808 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 HOXC8P31273 242 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 THPOP40225 353 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 MARCKSL1P49006 195 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 ST13P50502 369 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 HTRA3P83110 453 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 PTPN11Q06124 597 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 LLGL1Q15334 1064 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 PTGISQ16647 500 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 LONRF2Q1L5Z9 754 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 DESI1Q6ICB0 168 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 DCUN1D2Q6PH85 259 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 ZNF572Q7Z3I7 529 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 RNF180Q86T96 592 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 ERICH1Q86X53 443 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 MMGT1Q8N4V1 131 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 UBR7Q8N806 425 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 ARL10Q8N8L6 244 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 PCSK9Q8NBP7 692 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 ALG3Q92685 438 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 C18orf25Q96B23 403 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 TMEM176AQ96HP8 235 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 LRCH3Q96II8 777 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 VCPIP1Q96JH7 1222 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 HEXIM2Q96MH2 286 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 AGAP3Q96P47 875 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 TWNKQ96RR1 684 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 DDX47Q9H0S4 455 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 SDCBP2Q9H190 292 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 SYNCQ9H7C4 482 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 GOLGA2P5Q9HBQ8 144 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 ZNF358Q9NW07 568 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 ZNF446Q9NWS9 450 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 SAGE1Q9NXZ1 904 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 VTI1BQ9UEU0 232 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 TUBGCP4Q9UGJ1 667 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 HMGXB4Q9UGU5 601 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 UBQLN1Q9UMX0 589 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 ST3GAL5Q9UNP4 418 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms