RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 ECEL1O95672 775 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 CCNG2Q16589 344 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 CCDC14Q49A88 953 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 TFDP3Q5H9I0 405 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 CLLU1OSQ5K130 101 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 DDX42Q86XP3 938 aaKnown RBP eCLIP15.61■□□□□ 0.09
CCDC47-201ENST00000225726 GRK7Q8WTQ7 553 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 NCAPGQ9BPX3 1015 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 B3GNT5Q9BYG0 378 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 UBXN6Q9BZV1 441 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 DPH5Q9H2P9 285 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 CHST7Q9NS84 486 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 USP18Q9UMW8 372 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 CENPFP49454 3210 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 CLDN5O00501 218 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 FAM153BP0C7A2 387 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 LCP1P13796 627 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 CDKN2BP42772 138 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 GPS2Q13227 327 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 FAM153CQ494X1 144 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 NOMO2Q5JPE7 1267 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 SYDE1Q6ZW31 735 aaPredicted RBP15.61■□□□□ 0.09
CCDC47-201ENST00000225726 KCTD13Q8WZ19 329 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 RNF208Q9H0X6 261 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 FAM153AQ9UHL3 310 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 EFR3BQ9Y2G0 817 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 R3HDM2Q9Y2K5 976 aaKnown RBP15.61■□□□□ 0.09
CCDC47-201ENST00000225726 NBNO60934 754 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 FAM200BP0CF97 657 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 GBP1P32455 592 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 CCDC142Q17RM4 750 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 MREGQ8N565 214 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 ELAC1Q9H777 363 aaKnown RBP15.6■□□□□ 0.09
CCDC47-201ENST00000225726 KANSL3Q9P2N6 904 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 SDC4P31431 198 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 BRCC3P46736 316 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 TAF5Q15542 800 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 PLEKHG4Q58EX7 1191 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 PIGZQ86VD9 579 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 ATG4AQ8WYN0 398 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 RSPH1Q8WYR4 309 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 ACSF2Q96CM8 615 aaPredicted RBP15.6■□□□□ 0.09
CCDC47-201ENST00000225726 SUSD3Q96L08 255 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 TMEM161AQ9NX61 479 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 PCSK1NQ9UHG2 260 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 FEZ2Q9UHY8 353 aaPredicted RBP15.6■□□□□ 0.09
CCDC47-201ENST00000225726 KDELR1P24390 212 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 KCNJ1P48048 391 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 DSC1Q08554 894 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 SNX1Q13596 522 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 TAZQ16635 292 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 C15orf59Q2T9L4 293 aaPredicted RBP15.6■□□□□ 0.09
CCDC47-201ENST00000225726 SMTNL2Q2TAL5 461 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 CLEC20AQ6ZU45 233 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 FAM35AQ86V20 835 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 MYCBPAPQ8TBZ2 947 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 CFAP57Q96MR6 1250 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 KRT82Q9NSB4 513 aa15.6■□□□□ 0.09
CCDC47-201ENST00000225726 MYCP01106 439 aaPredicted RBP15.59■□□□□ 0.09
CCDC47-201ENST00000225726 KRT10P13645 584 aa15.59■□□□□ 0.09
CCDC47-201ENST00000225726 PTPN9P43378 593 aa15.59■□□□□ 0.09
CCDC47-201ENST00000225726 GPNMBQ14956 572 aa15.59■□□□□ 0.09
CCDC47-201ENST00000225726 EFHC1Q5JVL4 640 aa15.59■□□□□ 0.09
CCDC47-201ENST00000225726 KAZNQ674X7 775 aa15.59■□□□□ 0.09
CCDC47-201ENST00000225726 CMASQ8NFW8 434 aaPredicted RBP15.59■□□□□ 0.09
CCDC47-201ENST00000225726 CLEC4CQ8WTT0 213 aa15.59■□□□□ 0.09
CCDC47-201ENST00000225726 APBB2Q92870 758 aa15.59■□□□□ 0.09
CCDC47-201ENST00000225726 RTP3Q9BQQ7 232 aa15.59■□□□□ 0.09
CCDC47-201ENST00000225726 ACBD6Q9BR61 282 aa15.59■□□□□ 0.09
CCDC47-201ENST00000225726 TRIM31Q9BZY9 425 aa15.59■□□□□ 0.09
CCDC47-201ENST00000225726 TANC1Q9C0D5 1861 aa15.59■□□□□ 0.09
CCDC47-201ENST00000225726 I3L4J1 428 aa15.59■□□□□ 0.09
CCDC47-201ENST00000225726 TYMPP19971 482 aa15.59■□□□□ 0.09
CCDC47-201ENST00000225726 PAN2Q504Q3 1202 aaKnown RBP15.59■□□□□ 0.09
CCDC47-201ENST00000225726 ATL2Q8NHH9 583 aa15.59■□□□□ 0.09
CCDC47-201ENST00000225726 SEPT8Q92599 483 aa15.59■□□□□ 0.09
CCDC47-201ENST00000225726 PEBP4Q96S96 227 aa15.59■□□□□ 0.09
CCDC47-201ENST00000225726 NEUROG2Q9H2A3 272 aa15.59■□□□□ 0.09
CCDC47-201ENST00000225726 MYBPHLA2RUH7 354 aa15.59■□□□□ 0.09
CCDC47-201ENST00000225726 PRPSAP2O60256 369 aa15.59■□□□□ 0.09
CCDC47-201ENST00000225726 SH3PXD2AQ5TCZ1 1133 aa15.59■□□□□ 0.09
CCDC47-201ENST00000225726 PCED1BQ96HM7 432 aa15.59■□□□□ 0.09
CCDC47-201ENST00000225726 PCDHB8Q9UN66 801 aa15.59■□□□□ 0.09
CCDC47-201ENST00000225726 TMEM189-UBE2V1I3L0A0 370 aa15.58■□□□□ 0.09
CCDC47-201ENST00000225726 ADIGQ0VDE8 80 aa15.58■□□□□ 0.09
CCDC47-201ENST00000225726 PPP1R7Q15435 360 aa15.58■□□□□ 0.09
CCDC47-201ENST00000225726 KCNT1Q5JUK3 1230 aa15.58■□□□□ 0.09
CCDC47-201ENST00000225726 CYP4V2Q6ZWL3 525 aaPredicted RBP15.58■□□□□ 0.09
CCDC47-201ENST00000225726 KCTD6Q8NC69 237 aa15.58■□□□□ 0.09
CCDC47-201ENST00000225726 HASPINQ8TF76 798 aa15.58■□□□□ 0.09
CCDC47-201ENST00000225726 FAM172AQ8WUF8 416 aa15.58■□□□□ 0.09
CCDC47-201ENST00000225726 DNAH12Q6ZR08 3092 aa15.58■□□□□ 0.08
CCDC47-201ENST00000225726 ENPP3O14638 875 aa15.58■□□□□ 0.08
CCDC47-201ENST00000225726 AP1G2O75843 785 aa15.58■□□□□ 0.08
CCDC47-201ENST00000225726 BEST1O76090 585 aa15.58■□□□□ 0.08
CCDC47-201ENST00000225726 DDHD2O94830 711 aa15.58■□□□□ 0.08
CCDC47-201ENST00000225726 HSPA9P38646 679 aaKnown RBP15.58■□□□□ 0.08
CCDC47-201ENST00000225726 KRT17Q04695 432 aa15.58■□□□□ 0.08
CCDC47-201ENST00000225726 ADCY2Q08462 1091 aa15.58■□□□□ 0.08
CCDC47-201ENST00000225726 PTK6Q13882 451 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms