RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 PCGF5Q86SE9 256 aa18.47■□□□□ 0.55
GCDH-201ENST00000222214 KLHDC9Q8NEP7 349 aa18.47■□□□□ 0.55
GCDH-201ENST00000222214 MAK16Q9BXY0 300 aaKnown RBP18.47■□□□□ 0.55
GCDH-201ENST00000222214 CDC42EP4Q9H3Q1 356 aaKnown RBP18.47■□□□□ 0.55
GCDH-201ENST00000222214 AAASQ9NRG9 546 aa18.47■□□□□ 0.55
GCDH-201ENST00000222214 SRRM3A6NNA2 597 aaPredicted RBP18.46■□□□□ 0.55
GCDH-201ENST00000222214 ZNF487B1APH4 448 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 CHRNA1P02708 482 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 THP07101 528 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 PDGFRBP09619 1106 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 VPS41P49754 854 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 ARSEP51690 589 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 GNGT1P63211 74 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 OTUD4Q01804 1114 aaKnown RBP18.46■□□□□ 0.55
GCDH-201ENST00000222214 MORF4L2Q15014 288 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 P3H1Q32P28 736 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 DNAJC21Q5F1R6 531 aaKnown RBP18.46■□□□□ 0.55
GCDH-201ENST00000222214 RFX6Q8HWS3 928 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 TMEM86AQ8N2M4 240 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 ZCCHC9Q8N567 271 aaKnown RBP18.46■□□□□ 0.55
GCDH-201ENST00000222214 B3GALNT2Q8NCR0 500 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 ACTL9Q8TC94 416 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 HSPH1Q92598 858 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 TLCD1Q96CP7 247 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 ZIC5Q96T25 663 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 HNRNPABQ99729 332 aaKnown RBP18.46■□□□□ 0.55
GCDH-201ENST00000222214 TSPYL2Q9H2G4 693 aaPredicted RBP18.46■□□□□ 0.55
GCDH-201ENST00000222214 GOLGA2P5Q9HBQ8 144 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 CWC15Q9P013 229 aaKnown RBP18.46■□□□□ 0.55
GCDH-201ENST00000222214 BCCIPQ9P287 314 aaKnown RBP eCLIP18.46■□□□□ 0.55
GCDH-201ENST00000222214 TPX2Q9ULW0 747 aaKnown RBP18.46■□□□□ 0.55
GCDH-201ENST00000222214 TULP2O00295 520 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 XPO1O14980 1071 aaKnown RBP18.46■□□□□ 0.55
GCDH-201ENST00000222214 MDM4O15151 490 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 EIF3HO15372 352 aaKnown RBP eCLIP18.46■□□□□ 0.55
GCDH-201ENST00000222214 TTC4O95801 387 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 SHBGP04278 402 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 ASGR1P07306 291 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 LMO2P25791 158 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 TRNP1Q6NT89 227 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 PAXIP1Q6ZW49 1069 aaPredicted RBP18.46■□□□□ 0.55
GCDH-201ENST00000222214 SCUBE3Q8IX30 993 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 PIWIL1Q96J94 861 aaKnown RBP18.46■□□□□ 0.55
GCDH-201ENST00000222214 CALN1Q9BXU9 219 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 RNF19AQ9NV58 838 aa18.46■□□□□ 0.55
GCDH-201ENST00000222214 NOVA2Q9UNW9 492 aaKnown RBP18.46■□□□□ 0.55
GCDH-201ENST00000222214 SGK1O00141 431 aa18.45■□□□□ 0.54
GCDH-201ENST00000222214 SMAPO00193 183 aa18.45■□□□□ 0.54
GCDH-201ENST00000222214 PIK3R2O00459 728 aa18.45■□□□□ 0.54
GCDH-201ENST00000222214 CYB561D2O14569 222 aa18.45■□□□□ 0.54
GCDH-201ENST00000222214 CABYRO75952 493 aa18.45■□□□□ 0.54
GCDH-201ENST00000222214 CCDC130P13994 396 aa18.45■□□□□ 0.54
GCDH-201ENST00000222214 ADORA2BP29275 332 aa18.45■□□□□ 0.54
GCDH-201ENST00000222214 RPL9P32969 192 aaKnown RBP18.45■□□□□ 0.54
GCDH-201ENST00000222214 CDH6P55285 790 aa18.45■□□□□ 0.54
GCDH-201ENST00000222214 PPP2R2AP63151 447 aa18.45■□□□□ 0.54
GCDH-201ENST00000222214 MRPL10Q7Z7H8 261 aaKnown RBP18.45■□□□□ 0.54
GCDH-201ENST00000222214 KHSRPQ92945 711 aaKnown RBP eCLIP18.45■□□□□ 0.54
GCDH-201ENST00000222214 PEBP4Q96S96 227 aa18.45■□□□□ 0.54
GCDH-201ENST00000222214 CNOT10Q9H9A5 744 aaKnown RBP18.45■□□□□ 0.54
GCDH-201ENST00000222214 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.45■□□□□ 0.54
GCDH-201ENST00000222214 GABRDO14764 452 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 MCF2LO15068 1137 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 ZNF623O75123 536 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 AGTP01019 485 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 PAX3P23760 479 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 CHKAP35790 457 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 MDH1P40925 334 aaKnown RBP18.44■□□□□ 0.54
GCDH-201ENST00000222214 LHX1P48742 406 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 KCNA10Q16322 511 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 C15orf59Q2T9L4 293 aaPredicted RBP18.44■□□□□ 0.54
GCDH-201ENST00000222214 EFHC1Q5JVL4 640 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 MFSD5Q6N075 450 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 LRRC31Q6UY01 552 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 CYP4V2Q6ZWL3 525 aaPredicted RBP18.44■□□□□ 0.54
GCDH-201ENST00000222214 SLC2A14Q8TDB8 520 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 FAM172AQ8WUF8 416 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 ZFP42Q96MM3 310 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 CFAP57Q96MR6 1250 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 PHACTR1Q9C0D0 580 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 SHOC2Q9UQ13 582 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 RASGRF2O14827 1237 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 RGS16O15492 202 aaPredicted RBP18.44■□□□□ 0.54
GCDH-201ENST00000222214 GRAP2O75791 330 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 CTSHP09668 335 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 MLH1P40692 756 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 ATP1A2P50993 1020 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 DYNLT1P63172 113 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 SP3Q02447 781 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 GPS1Q13098 491 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 KRT81Q14533 505 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 PTGISQ16647 500 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 CDO1Q16878 200 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 CCSAPQ6IQ19 270 aaPredicted RBP18.44■□□□□ 0.54
GCDH-201ENST00000222214 RSAD2Q8WXG1 361 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 HAUS1Q96CS2 278 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 TMEM121Q9BTD3 319 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 DUSP16Q9BY84 665 aa18.44■□□□□ 0.54
GCDH-201ENST00000222214 NGRNQ9NPE2 291 aaKnown RBP18.44■□□□□ 0.54
GCDH-201ENST00000222214 GRIN2DO15399 1336 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms