RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 KIAA1324Q6UXG2 1013 aaKnown RBP10.92□□□□□ -0.66
TRPS1-201ENST00000220888 CCDC149Q6ZUS6 474 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 USP50Q70EL3 339 aaPredicted RBP10.92□□□□□ -0.66
TRPS1-201ENST00000220888 ARMC2Q8NEN0 867 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 DNAJB3Q8WWF6 145 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 PNMA5Q96PV4 448 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 KCTD10Q9H3F6 313 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 PPCSQ9HAB8 311 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 ATP6V1HQ9UI12 483 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 OPLAHO14841 1288 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 SERPINI2O75830 405 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 C16orf89Q6UX73 402 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 ATG9AQ7Z3C6 839 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 SLFN11Q7Z7L1 901 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 PLD3Q8IV08 490 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 TMEM159Q96B96 161 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 MRPL17Q9NRX2 175 aaKnown RBP10.92□□□□□ -0.66
TRPS1-201ENST00000220888 GRID1Q9ULK0 1009 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 TMCC3Q9ULS5 477 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 PBRM1Q86U86 1689 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 RBAK-RBAKDNI3L0D1 243 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 MYO1CO00159 1063 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 KPNA3O00505 521 aaPredicted RBP10.92□□□□□ -0.66
TRPS1-201ENST00000220888 ENO2P09104 434 aaPredicted RBP10.92□□□□□ -0.66
TRPS1-201ENST00000220888 CYP2A6P11509 494 aaPredicted RBP10.92□□□□□ -0.66
TRPS1-201ENST00000220888 RRM2P31350 389 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 NDUFV1P49821 464 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 SCNN1BP51168 640 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 KDSRQ06136 332 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 SNX30Q5VWJ9 437 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 ZCCHC8Q6NZY4 707 aaKnown RBP10.92□□□□□ -0.66
TRPS1-201ENST00000220888 FOXR1Q6PIV2 292 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 CYP4Z1Q86W10 505 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 FMR1NBQ8N0W7 255 aaPredicted RBP10.92□□□□□ -0.66
TRPS1-201ENST00000220888 GPC2Q8N158 579 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 DEPDC7Q96QD5 511 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 GEMIN8Q9NWZ8 242 aaKnown RBP10.92□□□□□ -0.66
TRPS1-201ENST00000220888 AMD1P17707 334 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 POLR2EP19388 210 aaKnown RBP10.92□□□□□ -0.66
TRPS1-201ENST00000220888 PMS1P54277 932 aaKnown RBP10.92□□□□□ -0.66
TRPS1-201ENST00000220888 SLC18A3Q16572 532 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 ZSCAN18Q8TBC5 510 aaPredicted RBP10.92□□□□□ -0.66
TRPS1-201ENST00000220888 BPIFA3Q9BQP9 254 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 FDXACB1Q9BRP7 624 aaPredicted RBP10.92□□□□□ -0.66
TRPS1-201ENST00000220888 THUMPD3Q9BV44 507 aaKnown RBP10.92□□□□□ -0.66
TRPS1-201ENST00000220888 FRMD8Q9BZ67 464 aaPredicted RBP10.92□□□□□ -0.66
TRPS1-201ENST00000220888 KLHL28Q9NXS3 571 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 DBR1Q9UK59 544 aaKnown RBP10.92□□□□□ -0.66
TRPS1-201ENST00000220888 A0A1B0GW55 424 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 DUX4L2P0CJ85 424 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 DUX4L3P0CJ86 424 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 DUX4L4P0CJ87 422 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 DUX4L5P0CJ88 424 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 DUX4L6P0CJ89 424 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 DUX4L7P0CJ90 424 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 S100A5P33763 92 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 HSPA9P38646 679 aaKnown RBP10.91□□□□□ -0.66
TRPS1-201ENST00000220888 FSCN1Q16658 493 aaKnown RBP10.91□□□□□ -0.66
TRPS1-201ENST00000220888 NBPF9Q3BBW0 867 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 DNERQ8NFT8 737 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 ACSF2Q96CM8 615 aaPredicted RBP10.91□□□□□ -0.66
TRPS1-201ENST00000220888 SGF29Q96ES7 293 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 PPP1R16AQ96I34 528 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 MTMR12Q9C0I1 747 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 VTA1Q9NP79 307 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 MIEF1Q9NQG6 463 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.91□□□□□ -0.66
TRPS1-201ENST00000220888 SCN3BQ9NY72 215 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 SMARCAL1Q9NZC9 954 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 DUX4Q9UBX2 424 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 RRP15Q9Y3B9 282 aaKnown RBP10.91□□□□□ -0.66
TRPS1-201ENST00000220888 PCDHGA4Q9Y5G9 962 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 C1orf167Q5SNV9 1468 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 NCF1BA6NI72 391 aaPredicted RBP10.91□□□□□ -0.66
TRPS1-201ENST00000220888 NCF1CA8MVU1 366 aaPredicted RBP10.91□□□□□ -0.66
TRPS1-201ENST00000220888 TEX33O43247 280 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 TSPAN3O60637 253 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 ENO1P06733 434 aaKnown RBP10.91□□□□□ -0.66
TRPS1-201ENST00000220888 NCF1P14598 390 aaPredicted RBP10.91□□□□□ -0.66
TRPS1-201ENST00000220888 CCDC144BQ3MJ40 725 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 FGD2Q7Z6J4 655 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 FAM71DQ8N9W8 422 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 ADAM33Q9BZ11 813 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 FOXP3Q9BZS1 431 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 DCLK3Q9C098 648 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 ETNK1Q9HBU6 452 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 IMPAD1Q9NX62 359 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 DDX43Q9NXZ2 648 aaKnown RBP10.91□□□□□ -0.66
TRPS1-201ENST00000220888 TDRKHQ9Y2W6 561 aaKnown RBP10.91□□□□□ -0.66
TRPS1-201ENST00000220888 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.91□□□□□ -0.66
TRPS1-201ENST00000220888 IGSF6O95976 241 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 CHGBP05060 677 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 NUMBP49757 651 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 CSTF3Q12996 717 aaKnown RBP10.91□□□□□ -0.66
TRPS1-201ENST00000220888 XRCC4Q13426 336 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 FBXO47Q5MNV8 452 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 TTC39BQ5VTQ0 682 aaPredicted RBP10.91□□□□□ -0.66
TRPS1-201ENST00000220888 AP1ARQ63HQ0 302 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 DENND1BQ6P3S1 775 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 ZDHHC15Q96MV8 337 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms