RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 CnpP16330 420 aa18.96■□□□□ 0.63
Trim71-201ENSMUST00000111816 Echdc3Q9D7J9 300 aa18.96■□□□□ 0.63
Trim71-201ENSMUST00000111816 Fam172aQ3TNH5 417 aa18.96■□□□□ 0.63
Trim71-201ENSMUST00000111816 Cyp3a11Q64459 504 aa18.96■□□□□ 0.63
Trim71-201ENSMUST00000111816 Gprc5dQ9JIL6 344 aa18.96■□□□□ 0.63
Trim71-201ENSMUST00000111816 Nfe2l3Q9WTM4 660 aa18.96■□□□□ 0.63
Trim71-201ENSMUST00000111816 Adssl1P28650 457 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 A1cfQ5YD48 595 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Dhx40Q6PE54 779 aaKnown RBP18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Pcp4l1Q6W8Q3 68 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Baiap2l2Q80Y61 522 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Scfd1Q8BRF7 639 aaKnown RBP18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Ciao1Q99KN2 339 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Fam227bQ9D518 532 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Adarb2Q9JI20 745 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Creb3l1Q9Z125 519 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Gm3147A0A0J9YU88 481 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Pkn1P70268 946 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Xlr3bQ6P205 226 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Cacnb1Q8R3Z5 597 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Mageb16Q9CWV4 363 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 SncgQ9Z0F7 123 aaKnown RBP18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Abcc6Q9R1S7 1498 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Peg3Q3URU2 1571 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Plin2P43883 425 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Defa17Q64016 82 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Zfp454Q80Y34 536 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Slc39a6Q8C145 765 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Spef1Q99JL1 234 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Trmt44Q9D2Q2 713 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Ttc25Q9D4B2 624 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Far2Q7TNT2 515 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Ppwd1Q8CEC6 646 aaKnown RBP18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Actl9Q8CG27 415 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Slc47a1Q8K0H1 567 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Dlg2Q91XM9 852 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Dis3Q9CSH3 958 aaKnown RBP18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 UmpsP13439 481 aaKnown RBP18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 BtkP35991 659 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Pkp1P97350 728 aaKnown RBP18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Rbm44Q3V089 1013 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Ccdc85aQ5SP85 500 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Ubp1Q811S7 540 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Q8BGD0 127 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 NgrnQ99KS2 293 aaKnown RBP18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 NwcQ9CQI4 244 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Gpc6Q9R087 555 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Cnksr1A2A9K7 700 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Ccdc7bE9Q9Y3 381 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Gm16440K7N6G6 218 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Gm8271L7N2E2 218 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Sema3eP70275 775 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Ccnt2Q7TQK0 723 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Znf569Q80W31 679 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Arhgap36B1AUC7 590 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Serpina5P70458 405 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 PrkcqQ02111 707 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 VclQ64727 1066 aaKnown RBP18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Lrfn2Q80TG9 788 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Olfr1122Q8VGT9 326 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Crtc3Q91X84 619 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Mgrn1Q9D074 532 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Gm5689F6Y2A6 97 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Srp54P14576 504 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 OsbpQ3B7Z2 805 aa18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Lsm7Q9CQQ8 103 aaKnown RBP18.95■□□□□ 0.62
Trim71-201ENSMUST00000111816 Kiaa0100Q5SYL3 2234 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Fam43bA2AM80 330 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Kifc5bE9PUA5 672 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Gm5431Q5NCB3 844 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Ttll4Q80UG8 1193 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Rab36Q8CAM5 267 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Tmem63cQ8CBX0 802 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Sik2Q8CFH6 931 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Hs6st1Q9QYK5 411 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Kcnma1Q08460 1209 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Tbc1d22bQ80VE5 505 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 H2-M9O19442 342 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Olfml2aQ8BHP7 681 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Plac9Q8K262 108 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 PdgfaP20033 211 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Tmem26Q3UP23 366 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Cdk20Q9JHU3 346 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Eif4g3Q80XI3 1579 aaKnown RBP18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Syndig1A2ANU3 258 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Mybpc1D3YU50 1127 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 CamkvQ3UHL1 512 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Pold4Q9CWP8 107 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Itih4A6X935 942 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 EpoP07321 192 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Pou1f1Q00286 291 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Trpv1Q704Y3 839 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Nudt14Q9D142 222 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Vmn2r25W4VSP2 855 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Gm13078A2AGW8 474 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Slc38a7Q8BWH0 463 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Myl9Q9CQ19 172 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Ift46Q9DB07 301 aa18.94■□□□□ 0.62
Trim71-201ENSMUST00000111816 Gm3636E9Q5P1 227 aa18.93■□□□□ 0.62
Trim71-201ENSMUST00000111816 Eif1adQ3THJ3 170 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms