RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Fam111aQ9D2L9 613 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Rbm31yQ9D3U4 565 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 March8Q9DBD2 286 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Scamp5Q9JKD3 235 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Wdfy3Q6VNB8 3508 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Mpig6bD7PDD4 242 aa12.92□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Vmn1r86L7N213 316 aa12.92□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Cldn4O35054 210 aa12.92□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Sdc4O35988 198 aaKnown RBP12.92□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 AladP10518 330 aa12.92□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Zp3P10761 424 aa12.92□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Gja4P28235 333 aa12.92□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 CidecP56198 239 aa12.92□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 YwhaeP62259 255 aaKnown RBP12.92□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Nr2c1Q505F1 590 aa12.92□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Gstt1Q64471 240 aa12.92□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Kcnt1Q6ZPR4 1224 aa12.92□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Stk40Q7TNL3 435 aa12.92□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Slc20a2Q80UP8 656 aa12.92□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Ctxn3Q8BXZ0 80 aa12.92□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Gucd1Q8BZI6 239 aa12.92□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 AdigQ8R400 80 aa12.92□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Pcdha12Q91Y18 950 aa12.92□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Tpgs1Q99MS8 303 aa12.92□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Rfc5Q9D0F6 339 aa12.92□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Rnf25Q9QZR0 456 aa12.92□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 PignQ9R1S3 931 aa12.92□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Dmxl1Q6PNC0 3013 aa12.92□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Cacna1eQ61290 2272 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Igkv5-43A0A0B4J1J2 115 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Unc13dB2RUP2 1085 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 D3Z070 196 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Gm10720D3Z1I5 223 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Cyp2t4E9PWV0 503 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Cdk7Q03147 346 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 St3gal2Q11204 350 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Q3TQQ9 903 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Dcaf17Q3TUL7 519 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Itpripl2Q3UV16 535 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Trav8d-2Q5R1B6 112 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Nab2Q61127 525 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Pum1Q80U78 1189 aaKnown RBP12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Fbxw21Q8BI38 468 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Hook1Q8BIL5 728 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Gpr180Q8BPS4 441 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 NelfbQ8C4Y3 580 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Ccdc187Q8C5V8 958 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Parp10Q8CIE4 960 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Scara5Q8K299 491 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Sgms1Q8VCQ6 419 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Slc25a3Q8VEM8 357 aaKnown RBP12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Ipo4Q8VI75 1082 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Fam49bQ921M7 324 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Cstf1Q99LC2 431 aaKnown RBP12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Lpin3Q99PI4 848 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Dlgap1Q9D415 992 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Spry1Q9QXV9 313 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Rasgrp1Q9Z1S3 795 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Ralgapa1Q6GYP7 2035 aa12.91□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Cyp4a12bA2A974 508 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Dmrta2A2A9A2 531 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Acnat1A2AKK5 416 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Gm42957D6RFQ2 366 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Cdh18E9Q9Q6 790 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 TpteG5E8H5 664 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Mup13L7N222 235 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Man2b1O09159 1013 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Pak1O88643 545 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Adrb1P34971 466 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Ptgs2Q05769 604 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Trappc9Q3U0M1 1148 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Scube3Q66PY1 993 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Adck2Q6NSR3 617 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Snx19Q6P4T1 997 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Rhbdf1Q6PIX5 856 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 FukQ7TMC8 1090 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 PrcpQ7TMR0 491 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Tbx10Q810F8 385 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Erlin2Q8BFZ9 340 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Tusc3Q8BTV1 347 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Lmo3Q8BZL8 145 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Syt15Q8C6N3 418 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Adamts2Q8C9W3 1213 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Scyl2Q8CFE4 930 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Neto1Q8R4I7 533 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Barhl2Q8VIB5 384 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Cyp4a12aQ91WL5 508 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Lims2Q91XD2 341 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Serpina9Q9D7D2 418 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Baiap2l1Q9DBJ3 514 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Iigp1Q9QZ85 413 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Atp12aQ9Z1W8 1035 aa12.9□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Wdr90Q6ZPG2 1874 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 CrebbpP45481 2441 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 2210011C24RikA0A087WQ89 206 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Lrrc73B2RWC4 316 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 5830411N06RikB3F5L4 1112 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Ccdc149F6V035 524 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Gm5814J3QP80 125 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Anp32aO35381 247 aa12.89□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms