RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Gemin2Q9CQQ4 269 aa12.83□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Marc1Q9CW42 340 aa12.83□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Dnaaf1Q9D2H9 634 aa12.83□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Dlgap1Q9D415 992 aa12.83□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Cbx6Q9DBY5 414 aa12.83□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Scamp5Q9JKD3 235 aa12.83□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Adam23Q9R1V7 829 aa12.83□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Eif2ak3Q9Z2B5 1114 aa12.83□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Top3bQ9Z321 862 aaKnown RBP12.83□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Eml5Q8BQM8 1977 aa12.83□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Scn8aQ9WTU3 1978 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Cyp2t4E9PWV0 503 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Pgrmc1O55022 195 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Cldn2O88552 230 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Myl1P05977 188 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Serpinc1P32261 465 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Stat4P42228 749 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Slc11a2P49282 568 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Taar7eQ5QD09 358 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Scube3Q66PY1 993 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Prl3a1Q78Y73 227 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Trim65Q8BFW4 522 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Kctd6Q8BNL5 237 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Cep95Q8BVV7 827 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Ankk1Q8BZ25 745 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Svs3bQ8BZH8 265 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Afap1l1Q8BZI0 768 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 NemfQ8CCP0 1064 aaKnown RBP12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Kat5Q8CHK4 513 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Zc3h3Q8CHP0 950 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Gspt1Q8R050 636 aaKnown RBP12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Luzp1Q8R4U7 1068 aaKnown RBP12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Fam114a2Q8VE88 497 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Barhl2Q8VIB5 384 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Snrnp25Q8VIK1 123 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Ube2sQ921J4 223 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Rfc5Q9D0F6 339 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 CabyrQ9D424 453 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Ndst4Q9EQW8 872 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Pdk2Q9JK42 407 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Znf354bQ9QXT9 601 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 St6galnac4Q9R2B6 360 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Kat6aQ8BZ21 2003 aa12.82□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Odf2A3KGV1 830 aaKnown RBP12.81□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 ImpactO55091 318 aa12.81□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Adssl1P28650 457 aa12.81□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Vamp7P70280 220 aa12.81□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Grm2Q14BI2 872 aa12.81□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 G2e3Q5RJY2 716 aa12.81□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Igbp1Q61249 340 aa12.81□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Xpo1Q6P5F9 1071 aaKnown RBP12.81□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Znf821Q6PD05 413 aa12.81□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Ctxn3Q8BXZ0 80 aa12.81□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Efl1Q8C0D5 1127 aa12.81□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Kctd15Q8K0E1 283 aa12.81□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Nol6Q8R5K4 1152 aaKnown RBP12.81□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Lrrc3bQ8VCH9 259 aa12.81□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Taf12Q8VE65 161 aa12.81□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Ankrd1Q9CR42 319 aa12.81□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Ogfod3Q9D136 315 aa12.81□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Rpl4Q9D8E6 419 aaKnown RBP12.81□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Phospho2Q9D9M5 241 aa12.81□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Dnajb9Q9QYI6 222 aa12.81□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Mfap5Q9QZJ6 164 aa12.81□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Plxnd1Q3UH93 1925 aa12.81□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Lrrc73B2RWC4 316 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Gm28042B7ZCM9 1014 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Vmn2r100E9QAZ9 850 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Ebf3O08791 596 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Cldn4O35054 210 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Stx1aO35526 288 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Ptger3P30557 365 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 TktP40142 623 aaKnown RBP12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 CtswP56203 371 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Mcl1P97287 331 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Mrpl10Q3TBW2 262 aaKnown RBP12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Trappc9Q3U0M1 1148 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Prdm6Q3UZD5 596 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Bahd1Q497V6 772 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Satb1Q60611 764 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Traf3Q60803 567 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Arnt2Q61324 712 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Pi15Q8BS03 258 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Tusc3Q8BTV1 347 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Elmo3Q8BYZ7 720 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 CcinQ8CDE2 588 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Asb2Q8K0L0 634 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Rell1Q8K2J7 272 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Angel1Q8VCU0 667 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Pth2rQ91V95 546 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Ophn1Q99J31 802 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 AdprmQ99KS6 340 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Rab11fip1Q9D620 645 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Necab3Q9D6J4 353 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Itga2bQ9QUM0 1033 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Trp53inp1Q9QXE4 239 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Nr4a3Q9QZB6 627 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Klra10Q9R1G6 266 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 NbnQ9R207 751 aa12.8□□□□□ -0.36
Ccdc28a-202ENSMUST00000080860 Gadd45gQ9Z111 159 aa12.8□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms