RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 KlO35082 1014 aa9.32□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 EmbP21995 330 aa9.32□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Gjc1P28229 396 aa9.32□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Flt3lgP49772 232 aa9.32□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 CtswP56203 371 aa9.32□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 MlxipQ2VPU4 917 aa9.32□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Grxcr1Q50H32 290 aa9.32□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Cntn2Q61330 1040 aa9.32□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Fam102aQ78T81 392 aa9.32□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Zdhhc17Q80TN5 632 aa9.32□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Llgl1Q80Y17 1036 aa9.32□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Lpin3Q99PI4 848 aa9.32□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Dbndd2Q9CRD4 158 aa9.32□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Q9D454 513 aa9.32□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Mrpl4Q9DCU6 294 aaKnown RBP9.32□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Piwil1Q9JMB7 862 aa9.32□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Mta2Q9R190 668 aa9.32□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Sept5Q9Z2Q6 369 aa9.32□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Cep290Q6A078 2472 aa9.32□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Btbd18A0A0A6YY25 723 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Olfr1305A2AVW3 312 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Gm5483B2RV77 97 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Cyp2t4E9PWV0 503 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Gm1758F6VZZ1 202 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Hes2O54792 157 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Cldn5O54942 218 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Pja1O55176 578 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Birc5O70201 140 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Fcer2P20693 331 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Pth1rP41593 591 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Slc11a2P49282 568 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 HpdP49429 393 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Adcyap1r1P70205 496 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Hoxd13P70217 339 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Cul4aQ3TCH7 759 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Cyp2j11Q3UNV2 504 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Nxf2Q4ZGD8 691 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Cldn11Q60771 207 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Papss1Q60967 624 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Tfap2bQ61313 459 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Atp11bQ6DFW5 1175 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Ttyh3Q6P5F7 524 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Casd1Q7TN73 797 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Bank1Q80VH0 783 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Chn2Q80XD1 332 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Smad3Q8BUN5 425 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Tp53inp2Q8CFU8 221 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Mfsd14bQ8CIA9 507 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Uhrf1Q8VDF2 782 aaKnown RBP9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Lims2Q91XD2 341 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Twf1Q91YR1 350 aaKnown RBP9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 AticQ9CWJ9 592 aaKnown RBP9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Acsl3Q9CZW4 720 aaKnown RBP9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Chordc1Q9D1P4 331 aaKnown RBP9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Spata17Q9D552 379 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Nmnat1Q9EPA7 285 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Rtl9Q32KG4 1339 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 DgkdE9PUQ8 1220 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Becn1O88597 448 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Psmc3O88685 442 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Tspyl1O88852 379 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Rpl7aP12970 266 aaKnown RBP9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Rpl10aP53026 217 aaKnown RBP9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Sh3bp1P55194 680 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Sesn2P58043 480 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Gng11P61953 73 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Frat1P70339 274 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Zscan2Q07230 614 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 NeblQ0II04 452 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Dennd1bQ3U1T9 766 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Ccdc61Q3UJV1 511 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Cd6Q61003 665 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Mon1aQ6PDG8 556 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Fbxl13Q8CDU4 790 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 IntS13Q8QZV7 732 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 CtbsQ8R242 366 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Angel1Q8VCU0 667 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Chn1Q91V57 459 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Uap1Q91YN5 522 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 TrabdQ99JY4 376 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Q9CQC3 228 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Ddit4Q9D3F7 229 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Q9D4A5 307 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 DpysQ9EQF5 519 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Scamp5Q9JKD3 235 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Cpxm1Q9Z100 722 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Umodl1Q5DID3 1319 aa9.31□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Ighv11-2A0A075B5R8 117 aa9.3□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Igkv5-45A0A0B4J1J1 115 aa9.3□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Fam71aB7XG49 585 aa9.3□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Myo1eE9Q634 1107 aa9.3□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Olfr731F8VQB9 326 aa9.3□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Gm7694J3QNH8 270 aa9.3□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 CraddO88843 199 aa9.3□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Nkx2-5P42582 318 aa9.3□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 AdprhP54923 362 aa9.3□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Fam193bQ3U2K0 892 aa9.3□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Odr4Q4PJX1 447 aa9.3□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 OgdhQ60597 1023 aaKnown RBP9.3□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 CttnQ60598 546 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 47.2 ms