RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Trpv1Q704Y3 839 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Tas2r125Q7M710 311 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Zfp454Q80Y34 536 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ppp1r12bQ8BG95 976 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Morc4Q8BMD7 928 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Pak4Q8BTW9 593 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 NcaphQ8C156 731 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ap3m2Q8R2R9 418 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Lars2Q8VDC0 902 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Krt5Q922U2 580 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Terb2Q9D494 218 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Sgf29Q9DA08 293 aaKnown RBP11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 1700013H16RikQ9DAC5 291 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 PtgisO35074 501 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Cdh16O88338 830 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Cd86P42082 309 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Mxi1P50540 228 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ogfod1Q3U0K8 545 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Gemin4Q6P6L6 1058 aaKnown RBP11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Sun2Q8BJS4 731 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ccser1Q8C0C4 895 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Castor2Q8CAB8 329 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Stau2Q8CJ67 570 aaKnown RBP11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Hip1Q8VD75 1029 aaKnown RBP11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Foxp3Q99JB6 429 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Nmd3Q99L48 503 aaKnown RBP11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ino80bQ99PT3 375 aaKnown RBP11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Txndc9Q9CQ79 226 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Rnf135Q9CWS1 417 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Cul2Q9D4H8 745 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Prl2b1Q9DAZ2 228 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Zscan4-ps1A0A1C7CYV3 506 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Zscan4dA7KBS4 506 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 E230025N22RikG5E8S3 482 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Tlk2O55047 718 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ccnd1P25322 295 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Cdc25cP48967 447 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Cav1P49817 178 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Lpar1P61793 364 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 NfiaQ02780 532 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ptgs2Q05769 604 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Rnf113a2Q14B01 337 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Zscan4fQ3URS2 506 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Insm1Q63ZV0 521 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Prpf38bQ80SY5 542 aaKnown RBP11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Zscan4cQ80VJ6 506 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Thnsl1Q8BH55 747 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Rasgef1cQ9D300 466 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Q9D4A5 307 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Trim54Q9ERP3 366 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Htra2Q9JIY5 458 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Slc22a3Q9WTW5 551 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Zfp990B1AVN5 605 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Vmn2r15L7N2A0 855 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 GnazO70443 355 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Snx3O70492 162 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 ThbdP15306 577 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 CstaP56567 97 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Nat8lQ3UGX3 299 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Polr2eQ80UW8 210 aaKnown RBP11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Olfml3Q8BK62 406 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ephb1Q8CBF3 984 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Gpc3Q8CFZ4 579 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Fam83aQ8K2P2 436 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Tasp1Q8R1G1 420 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Snx9Q91VH2 595 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Trpv6Q91WD2 767 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Rilpl2Q99LE1 197 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Scyl3Q9DBQ7 735 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Chst7Q9EP78 484 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 PodxlQ9R0M4 503 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ggt5Q9Z2A9 573 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Zc3h4Q6ZPZ3 1304 aaKnown RBP11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Gm3460E9QAI8 215 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Rab17P35292 214 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Psmc4P54775 418 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Olfm3P63056 478 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 OtulinQ3UCV8 352 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Camta2Q80Y50 1208 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Lyve1Q8BHC0 318 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Gprc5aQ8BHL4 356 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ccdc159Q8C963 411 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Trim32Q8CH72 655 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Gtpbp10Q8K013 366 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Q99KU6 348 aa11.3□□□□□ -0.6
Msh3-201ENSMUST00000022220 Spata31d1dE9Q5W2 1247 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 1700024B05RikE9Q6D7 167 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 PigrO70570 771 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Nrp1P97333 923 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Znf583Q3V080 568 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Acvrl1Q61288 502 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Cypt2Q6P924 180 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Gpr151Q7TSN6 422 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Tbc1d10bQ8BHL3 798 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Nat14Q8BVG8 206 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Basp1Q91XV3 226 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ttc1Q91Z38 292 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Nsmce3Q9CPR8 279 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Actrt1Q9D9J3 376 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Q9DA42 136 aa11.29□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 22 ms